Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  <---------GLK1(1)                               --------->ARR11(3)                               --------->ARR14(2)                               <---------ARR14(2)                               <---------GLK1(2)                               <---------ARR11(3)                              <------ZmHOX2a(1)                        --------->YAB1                       <---------YAB1                   <---------ANAC58                    --------->AHL20(1)                  <---------ANAC46                    --------->ARR11(3)             <---------At5g28300           <-----------GT1                    <---------ARR11(3)         <---------ZAT6          ------->TEIL        <--------- -----AtLEC2        <---------AHL20(1)     --------->REM1(2)        <---------YAB1  <----------DOF2 >CCA1(2)          --------->AHL20(2)   <----------DOF2 <---------ANAC58       <-----------GT1   aaggccaaggctcacaaacaaatatatcataaggattttcgtctttgtagagtcactgccttgggaagacatgaatgtgtttttcactttcggctttagt  10926400                                                                                                  ---                                                                                                  <--                                              ------->MYC2                             ------->TEIL                                              <-------MYC2                          --------->ANAC55(2)                                              <-------MYC3                          <---------ANAC55(2)                  <-------TEIL------>ZmHOX2a(1)                                   --------->CCA1(2)     ================================HOX2a_HOX2a                                 --------->ARR14(2)     ------>ZmHOX2a(2)       --------->TOE2(3)------->MYC3                  --------->ANAC46  ------- -DOF2     <----------DOF2  ----------------->AG<-------TEIL  <---------ALFIN1   <---------ARR14(2)   tcatcgatctcttctttaagtgcatccatttcctaaacagtatgtacacatgcattaatcttctccacatctatatacacacagatatgtatcatggact  10926500                                                                    <---------------AtSPL3                                                                    <---------------AtSPL8                                                                   <---------ANAC58                                                         <---------ANAC58                                                         <---------ANAC58     --------->GLK1(1)                                   <---------ANAC46    --------->ARR11(3)                           ----------->GT1   <---------ANAC46    <---------ARR11(3)                       --------->DAG2        <---------ANAC58        <--------- ----->P                                    ---------->DOF2     --------->TOE1(2)  --------->YAB1 -------At5g28300     --------->ALFIN1   --------->YAB1--------->ARR11(3)         <---------YAB1 >TEIL              <---------ANAC46   --------->AtLEC2<---------AHL20(2)     <----------DOF2       <   taccgagatatcaaggggaatcgagtggaagtagtgagtccattcagaaagtggtaatttcttgaacttgcgagtacgttctttatcatcaaatgtcaga  10926600                                                          --------->ANAC58                                                          --------->ANAC58                                                  <-----------RAV1(2)                                                 --------->TGA2(2)                                               =======================================MYC_MYB                                               ====================bZIP_DOF                                               <---------TGA2(1)                                               --------->bZIP60(1)                                               <---------bZIP60(1)                                               --------->TGA2(1)                                               --------->O2                                               <---------TGA1a                                               <---------ANAC55(2)                                               <---------O2                                               --------->TGA1a                                              ----------->STF1                                              <-----------STF1                                            ----------->TGA1                                   --------->MYB52(1)    --------->GLK1(1)                                   -------->P<---------TGA2(2)                                   ======================MYC_MYB                    --------->AHL20(1)                                <---------ANAC58<-----------TGA1                    <---------AHL20(1)                                <---------ANAC58<-----------HVH21                   --------->AHL20(2)                        <---------DAG2--------->LBD16   ---------->DOF2             <---------AHL20(2)                        =================================bZIP_DOF                  --------->AHL20(2)     <---------ZAT18    <----------DOF2--------->LBD16 <------ZmHOX2a(1)      ------->GAMYB --HVH21          --------->ARR14(2) <---------LBD16--------->At4g35610    --------->MYB52(1) ---------YAB1    <---------ARR14(2)<---------LBD16 <---------At4g35610 --------->TOE2(3)   gtattagtggccttcaaacgaatacgctttataggcttaccgggaaatgacgtcagaggaaagccatagagttttcttaacggaaataaattggtcgtag  10926700                                             <---------ANAC58                           ---------->ID1    <---------ANAC58                                 -------                --------->CCA1(2)            <---------ANAC46                                --------                <------ZmHOX2a(2)       <-----------RAV1(1)                       <-----------GT1               --------->AGP1           <---------REM1(1)           *TSS       --------->YAB1--------               --------->ARR11(3)       <---------O2  <-------TEIL --------->CCA1(2)        <--------               <---------ARR11(3)       <---------TGA1a<---------ICU4        <------------CBF<-------              --------->GLK1(1)         <---------bZIP60(2) <---------YAB1------------>CBF  ---------   aaggaagagaaaactgagatccaagttttggcctaaaaactgatgtggcttccatgttcattacaaatgatatggaatcaattgtcaccatcaaatatat  10926800                --------->AHL20(2)                <---------AHL20(2)                <-----------TBP              ----------->TBP                                                                  ------  --------->ANAC58                                            <----------DOF2              ----------  --------->ANAC58                                            <---------DAG2           <---------YAB1  ----------->GT1                                       --------->ALFIN1         --------->AHL20(1) -->CCA1(2)   --------->AHL20(2)                      <---------ANAC58           --------->AHL20(2) ->ARR11(3)  <---------AHL20(1)                       <---------ANAC58           <---------AHL20(2) ->AHL20(1)  --------->AHL20(1)                       <---------ANAC46           <---------AHL20(1) ---TBP --------->AHL20(2)<-----------RAV1(2)       <---------ARR11(3)           --------->ARR11(3) --AHL20(1) --------->AHL20(2)                      --------->ARR11(3)           <---------ARR11(3) >AHL20(2)--------->AHL20(2)                   ------------>CBF                 --------->AHL20(2)   aggcacgaaaaaaaatatatatataggcacaggtactagtttgccagactacaatatcgtggtgctttttttttcagccaaaatatattagaattgttta  10926900                                                                        ---------->DOF2             <---------AHL20(2)                                ----------->HVH21          --------->ATHB12             <---------ATHB51                                --------->O2                 --------->ATHB51            <---------AHL20(1)                               <---------O2--------->DAG2   -------->ATHB1         <---------AHL20(2)                                  <---------TGA1a             <---------YAB1   --------->ANAC46                                          --------->bZIP60(2)<------ZmHOX2a(1) --->AHL20(2)--------->AHL20(2)                              ======================bZIP_DOF        <- ->GT1   --------->AHL20(2)    --------->GLK1(2)             --------->TGA1a   ----------->GT1-------   tatatacagaataaaataattctagtatatgagaatttgttttgtttttagcaaatgtctgccatgtgactcgaaaaagcgaggaaaaactattattgat  10927000                                                                                                    <                                                                                                    <                                                                                                   <-                                                                                                  ---                                                                                                  <--                                                                                       --------->GLK1(2)                                                                                      --------->KAN4(2)                 <---------ARR11(3)                                                  --------->HSFC1(2)                 --------->ARR11(3)                  <---------ANAC58                --------->HSFB2a(1)                --------->CCA1(1)               <----------DOF2                      <---------HSFB2a(1)                --------->RVE1(1)              <---------DAG2              <---------ANAC58 <--------       ---------->DOF2                       -------->P  <---------YAB1    <---------ANAC46----------     --------->YAB1                         <-----------GT1       <----------DOF2    <---------HSFC1(2) --------TOE2(3)<-----------GT1      --------->ZAT6  <---------ANAC58      <---------ANAC58--------->LBD16 -->ATHB12  >>>>>>>>>>GT-3b        <-----------GT1   <---------ANAC46    <-----------GT1 <---------LBD16   taagaaatcaaaagaaaaataccttctcaacatttgataaccctacttaccttttgcttatgattcttcttttttttacttggaagaaaattccggtaat  10927100                                 --------->LBD16                                 <---------LBD16         <---------YAB1      --------->GLK1(2)                                       <---------TOE2(3) ---------TOE2(3)            --------->ARR14(2)                                --------->ARR11(3) ---------ANAC46     --------->AHL20(1)                                        <---------ARR11(3) --------LBD16       --------->ARR11(3)                                      --------->ICU4 ------>MYB52(1)     <---------ARR11(3)                     ---------->DOF2---------->DOF2 ---------GT1        <---------AHL20(1)             <---------At5g28300<---------TOE2(3) -MYB52(1)--------->ATHB12   <---------ARR14(2) --------->ATHB12 <---------------AGL15      <-------- ->GT1<---------TOE2(3) <-----------GT1    <---------AHL20(2)    ====================================   ttacggataagattattgaagaatattttcaaatctggggaatatgaaattgattacggcgataatgcaaatagaggtaaagattttaagaatactgtat  10927200                                                                     --------->AHL20(1)                                                                     <---------AHL20(1)                                                             --------->ATHB12<----------DOF2                    --------->AHL20(2)                      <---------AHL20(2)        <--------------                    --------->AHL20(1)               --------->At5g28300    <---------ANAC58                    <---------AHL20(1)              ----------->GT1  <---------AHL20(2)      ----------->GT1<---------YAB1                <---------ZAT6   --------->AHL20(2)<----------DOF2 -------AGL15 ----------->GT1                  <---------ZAT14 <---------WOX13(1)  <-----------GT1 =======MADS_MADS  --------->YAB1       <---------YAB1      <---------YAB1  <---------ANAC58      <--   tttgaaatgagttaaatggaaatataatacgttgtcaaacttattgtagtctagtggtaaatttgattgattatattggcttttttttcttttctgtttt  10927300  Previous    Next  AGI:  At4g20230.1    Description:  terpene synthase/cyclase family protein. similar to terpene synthase/cyclase family protein [Arabidopsis thaliana] (TAIR:AT4G20200.1); similar to lyase/ magnesium ion binding [Arabidopsis thaliana] (TAIR:AT3G29190.1); similar to terpene synthase/cyclase family protein [Arabidopsis thaliana] (TAIR:AT1G66020.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83470.1); contains InterPro domain Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930); contains InterPro domain Terpene synthase, metal-binding; (InterPro:IPR005630); contains InterPro domain Terpenoid synthase (InterPro:IPR008949); contains InterPr Range:  from: 10924131    to: 10926768    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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