Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             <---------MYB46(3)        <-----------RAV1(1)  --------->ARR11(3)  <---------AHL20(1)                                                                            ----- --------AHL20(2)                                                                               ----- ------->AHL20(2)                                                                               <---- --->AHL20(2)                ------>MYB46(1)        ------>ZmHOX2a(1)                       <-------- ----AHL20(2)                ------>MYB83      <----------DOF2 ------>MYB83                 --------- -->AHL20(2)      ---------->DOF2           <-----------GT1    ------>MYB46(1)              <--------   tttatatattctgtggtttctaaagaagaccaaatgtttttttttttttctttcctaagaagaccaaatgttatgtcaaagtttaggcactgttttaatt  10883800                                                           <----------DOF2                                                       <---------WRKY18(1)                                                      ----------->HVH21             --------->ANAC46                         --------->WRKY12             --------->ANAC58             <---------------AtSPL3 <-----------GT1                        --------->YAB1--------->WRKY45 ---->YAB1   --------->ANAC58       ------->TEIL      --------->WRKY38(1) ---->AHL20(2)                   --------->ANAC58    --------->DOF5.7(2)            ----------->GT1 -----AHL20(2)       --------->AHL20(2)<---------YAB1<---------MYB52(1)          ---------->DOF2 -AHL20(2)  <---------LBD16      --------->ANAC58   <-------GAMYB            --------->YAB1 >AHL20(2) <---------ALFIN1    --------->ANAC46    <---------MYB46(3)      <---------WOX13(1) ------- -YAB1    <---------REM1(2) --------->ZAT14   --------->SPL7             --------->ATHB12---------->DOF2   atataacatgtctccacggacgaataaatgtacacacgaacatcatagtacgaccgttgacctttgcccctccattgattgataaaaggctaaaagccga  10883900                                                                                              -------                                                                                      ------>ZmHOX2a(2)                                                                                     <<<<<<<<<GATA-2                                                                                     <<<<<<<<<GATA-4                                                           --------->WRKY38(1)       <<<<<<<<<GATA-3                                                           --------->WRKY45          <---------GLK1(1)                                                ----------->HVH21                    <<<<<<<<<GATA-1                                              ----------->RAV1(2)                    <------ZmHOX2a(2)                                              ------>ZmHOX2a(1)                     <---------AGP1 --                <---------HSFB2a(1)           --------->At4g35610                   --------->ARR11(3)                <---------HSFC1(2)            <---------At4g35610        ===================HOX2a_HOX2a                --------->HSFC1(2)   --------->O2          --------->WRKY12         <---------ARR11(3)                --------->HSFB2a(1)  <---------ALFIN1      ----------->HVH21       <---------CCA1(2)    <---------YAB1                 <---------ALFIN1      <----------DOF2 ====================HOX2a_HOX2a -->RAP2.6(2)  ------->TEIL   --------->ARR14(2)--------->WRKY12         ------>ZmHOX2a(1)    -------   aacattttcattctacgagccttcccattccatttccccacatctctcctctgacctctctttgacccctctctcctctctctctagatctctcaataaa  10884000       ----------->GT1      ------------------------>ANAC81 -->AHL20(2) --------->GT1            ---------->DOF2                              --------->HSFB2a(2) --->DOF2    ---------->DOF2          ---------->DOF2          <-----------GT1                    ---   acagtgaaatagcaaaaaagaaacacaaaaaagagagagagaaagaaactttgttctctctgcatttactcttctccaactcagagatagagtccctatg  10884100                 --------->YAB1                <---------ATHB12                                                                    -               ------>MYB83                                                                         -               ------>MYB46(1)                                                           ------>ZmHOX2a(1)              --------->WOX13(1)             --------->REM1(1)                          --------->TOE2(3)  <---------MYB52(1) <----------DOF2<---------ICU4                                 <<<<<<<<<TBF1  <-- ---->TEIL  ------------>CBF       <---------YAB1   --------->YAB1        --------->TOE2(3)       ---   caccgtttctaatgaccaatcatctttctccctcttcatcattctctacaacaagaatcacacaaatgccataaaacctccattcttcttcctcagtaaa  10884200                                                                                     --------->LBD16                                                                                <---------WRKY38(1)                                                                                <---------WRKY12                                                                               --------->WRKY18(1)                                                                            --------->MYB59                                                                       --------->LBD16  --------->GLK1(1)          <----------ID1               <---------ARR11(3)            <---------LBD16------->GAMYB       *TSS                     <---------MYB55(2)                   <-----------------AGL1   --------->TOE1(3)       --------->ANAC58                          <-----------------AG ----->MYB46(1)            --------->AtLEC2                          ----------------->AGL1--------->YAB1 ----->MYB83               --------->ANAC46                 ------>ZmHOX2a(1) <-----------HVH21 -------MYB59              --------->ANAC58     ------>ZmHOX2a(1)  <-----------GT1-------->P     ---- ------>AtMYB61   >>>>>>>>>TBF1 --------->MYB46(3) ------>ZmHOX2a(1)<-----------GT1<---------LBD16   ccaaaccataagacgacgaagaagaaaacatgcaaccactagttcttctcctcctcttcatcctctgtttttccggtttaggtcaaccgggtatcatcaa  10884300                                            <---------ARR14(2)      ----------->RAV1(1)                                            --------->ARR14(2)      ------>NtERF2                                            ------->TEIL           <---------ETT(1)                                         --------->ANAC58          ----------->HVH21    ------>ZmHOX2a(2)                    --------->ANAC55(2)       --------->ANAC46   <------ZmHOX2a(2)                     --------->ANAC58         <-----------------AGL1  <---------ARR11(3)          --------->ARR11(3)               ------>ZmHOX2a(1)  <---------ARR14(2)          <---------ARR11(3)           <---------ARR11(3)                --------  --------->ARR14(2)         --------->GLK1(1)             <---------ARR14(2)           --------->TOE2(3)  --------->ARR11(3)         <---------GLK1(1)             --------->ARR11(3)     --------->YAB1 ------->GAMYB   --------->HSFB2a(2)     <---------ANAC55(2)<------ZmHOX2a(2)    <---------YAB1 ----->MYB46(3)  <---------HSFB2a(2) <-----------HVH21     --------->ARR14(2)<---------GLK1(1)   caacgatcttcagactcttctcgaggtgaagaaatctttggtcacgaatccacaagaagacgatcctctccgacaatggaactctgataacatcaactac  10884400                                                                    <---------TOE2(3)                                                             <-----------------AGL2                     ----------->RAV1(1)                     <-----------------AG                 <-------MYC3          <---------ANAC55(1)   <-----------------AGL1                 ------->MYC3          <---------ANAC46     --------->MYB52(1)         --------->LBD16               <---------ANAC58     -------->P<------ZmHOX2a(1)       <---------LBD16     --------->MYB52(1)            --------->TOE1(3)              <-----------GT1 ->MYB46(3) <-----------HVH21          <---------ANAC58  --------->TOE2(3)<-----------GT1   tgttcttggaccggagtcacatgcgacaataccggtttatttcgtgtaattgctctaaaccttaccggtttaggattaaccggttcaatttcaccttggt  10884500                                                       <---------ALFIN1              <---------ANAC58                ------>MYB83                        --------->PCF2           --------->TOE2(3)                ------>MYB46(1)                   <------MYB46(1)          -------->P<---------ANAC46              --------->TOE2(3)           --------->GLK1(2)                ------>MYB46(1)              <---------MYB59           --------->MYB46(3)                 ------>MYB83   <---------DEAR3(2)        ------>ZmHOX2a(2)    <------MYB83   --------->ZAT14     <---------ANAC58 <---------ORA47(1)        <---------ARR11(3)   <--------P    <---------ZAT2 <---------MYB59   ttggccggtttgacaacctaatccaccttgatctatcttccaacaatctagttggtcccatcccaactgctctctccaaccttacttccttggagtctct  10884600                                            <---------At4g35610                                            --------->At4g35610                                           <---------ATERF1(1)                     --------->DEAR3(1)   <---------DEAR3(1)             <---------ARR14(2)                    --------->DEAR3(2) <---------At4g35610               --------->ARR14(2)                 ----------->HVH21     <---------ZAT2                   <------ZmHOX2a(1)                 ------->GAMYB         --------->At4g35610            <---------TOE1(3)                <---------MYB52(2)--------->ANAC46             <---------MYB52(1)                  --               ------>MYB83  <---------ARR14(2)           --------->ARR11(3)                       <-               ------>MYB46(1)  <---------ANAC58          <---------ARR14(2)                      <--             ------->GAMYB   --------->GLK1(2)      --------->TOE2(3) <---------TOE2(3)           ---            --------->MYB46(3)  <---------ANAC58 XXXXXXXXXXXXXXXXXXXX>MIR780.2                    <--          <-----------GT1   <---------GLK1(2) ------>NtERF2 <---------LBD16------>ZmHOX2a(2)      ---    <----------DOF2--------->MYB52(1)  --------->ZAT2     --------->ARR14(2)             <----------DOF2   gtttctcttttctaaccaactcaccggcgagattccgagccagctcggctccctcgttaatatccggtcgctaaggatcggagacaatgagcttgttgga  10884700  Previous    Next  AGI:  At4g20140.1    Description:  leucine-rich repeat transmembrane protein kinase, putative. similar to EDA23 (embryo sac development arrest 23), ATP binding / protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT5G44700.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15313.1); similar to hypothetical protein OsI_025193 [Oryza sativa (indica cultivar-group)] (GB:EAZ03961.1); similar to Leucine Rich Repeat family protein [Solanum demissum] (GB:AAT40539.2); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (Int Range:  from: 10884207    to: 10888280    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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