Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 <---------AHL20(2)                                                                              <---------AHL20(1)                                                                              --------->AHL20(1)                                                                            <---------AHL20(1)      -                                                                            --------->AHL20(1)    ---                                                                         --------->AHL20(2) ---------                                                                         --------->YAB1 --------->ANAC58                                                                        <---------YAB1  --------->ANAC58                                    <----------DOF2                    <---------AHL20(2)   ---------                              <---------ICU4       <---------AHL20(2)  --------->AHL20(2)   ---------                         --------->ANAC58          --------->AHL20(2) --------->YAB1  ---------->DOF2      --------->AHL20(2) --------->ANAC58       ----------->GT1--------->MYB52(1)<---------AHL20(2)--   aactgatttttaatatgacattgacataagaaacattactttctctcgtctagttaaatatcagaaaacggattataatatatatttttaaagcaagaaa  10853000                                      --------->GLK1(2) ---------->GT1                      <---------GLK1(2)                         <---------ANAC46 ------->DOF2            ------>ZmHOX2a(2)                            <---------YAB1 -->GT1                --------->ARR11(3)                         <-------GAMYB<---------ANAC58 >ANAC58 <---------MYB52(1)<---------YAB1                        ----------->GT1       ----------->GT1 >ANAC58 --------->DOF5.7(2)--------->ATHB12           <---------ARR14(2)      <---------ANAC58 ------->DAG2          <---------ARR11(3)              --------->ARR14(2)     ------>NtERF2   aaaagtaaaacgttacctctgaattgatcttgattgtgagattctctattgtttagggattcgaatggggttatacttgaggcctgtgaatgtaaaacag  10853100                   <---------MYB59                  --------->ANAC55(2)                  <---------ANAC55(2)                <-----------GT1            <---------AHL20(2)         ----------->GT1        --------->DAG2                       --------->AHL20(2)                                <-----       ---------->DOF2                 --------->ANAC46                                 --------->WOX13(1)    --------->ANAC58                   --------->ANAC58                --------->ARR11(3)    --------    --------->ANAC58                   --------->ANAC58           <------ZmHOX2a(1)    <---------AHL20(2)  --------->MYB52(1)          <-----------GT1--------->YAB1     <---------TOE2(3)     --------->AHL20(2)   agccaaacgaaaagttaattacctatttgatattactgcataagcaataaaaaaaactctatatataaggatggatattgcaaatcgaataaatcagatg  10853200           <----------DOF2   --------->ATHB12                                                     --- ---------->DOF2    ----------->GT1     --------->ANAC58                                      ------- ----REM1(1)  --------->AHL20(2)        --------->ANAC58    ------->TEIL                ------->TEIL ->At4g35610  <---------AHL20(2)  ---------->DOF2---------->DOF2           ------->TEIL<---------CCA1(2)   tagaaaagaagcacttttaatttggaaaaattgattaaaagtaagaaattcaaaagaacatgtatatatagagaatgtatgtgtataatgtatctacaaa  10853300            <-------GAMYB      --------->YAB1                                        <---------HSFC1(2)     <---------ATHB12                      <-------GAMYB*TSS--------->HSFC1(2)              --------- ------->DOF2        --------->CCA1(2)    <-----------RAV1(1)                    --------->AHL20(2) --->DOF2  ----------->GT1     ---------->DOF2        ---------->DOF2     ---------->DOF2--------->MYB52(1)   gaaagaaatcatgctgttatatgatatacaaataaaaggtttctctgttggacaatgaaagaggcttcttcatcttaaaagaattaaaaaaaaacagaga  10853400                   ----------->GT1                   --------->ANAC55(2)                                                  --------->CCA1(2)                   <---------ANAC55(2)                                                 --------->ARR14(2)                   <------MYB83                   <------MYB83                      --------------->AGL15                   <------MYB46(1)                --------->ANAC55(2)             --------->MYB52(1)                  --------->MYB59                 <---------ANAC55(2)             -------->P  <------               --------->YAB1                     <------MYB46(1)                <-----------GT1               --------->ATHB12                  --------->MYB59               <---------ANAC58              <---------YAB1                  --------->YAB1                   <---------ANAC58  --------->AHL20(2)                          --------->ATHB12                 <---------ANAC55(2)  <---------AHL20(2)                         <---------YAB1                    --------->ANAC55(2) -->GT1 ---------->DOF2                ---------->DOF2              <-----------RAV1(1)<---------ARR11(3)   aaattttaatcaaagaatgataggtaatttcttagcaaaaaaaaagaatgataggtaatgaaatggggaaatgttgggattacttaccagatatatgaaa  10853500                                                     --------->At5g28300                                                    ----------->GT1                                                 <------MYB83                                                 <---------ANAC46                                                 <------MYB46(1)              ------->TEIL         --                                                --------->MYB111(1)       <-----------ARR10   -------                                                --------->MYB52(2)        <---------ARR11(1)  <------                                                <---------AtMYB61<------MYB46(1)        <------------                                                --------->MYB111(2)       <---------ARR14(2)  -------                                                --------->MYB46(2)        --------->ARR14(2)------->TEIL                                                --------->MYB55(2)       <---------CCA1(2) <---------           <---------YAB1                       --------->MYB59 --------->MYB59      --------->AHL20(2)   <----------DOF2         --------->DAG2      <---------MYB55(1)<------MYB83 -------->P------------- ---AHL20(2)--------->YAB1---------->DOF2   <---------YAB1      <---------TOE2(3)    <---------AHL20(2)   ttggccttttattttcatagcaaaattgaaaagttagtctagagtcatgttaggtggtaaaacaattaggttcccaaatctacctatttatatgtacctt  10853600                                                                                                    -                                                                                                    <  --------->AHL20(2)                                                                               --  <---------AHL20(2)                                             ----------->GT1                   <- --------->GT1     ---------->DOF2                            --------->ANAC58                     -- -->TOE1(3)  ------->GAMYB                                    --------->ANAC46                    <-- ---DAG2     --------->AtMYB61                         ----------->GT1   <---------AHL20(2)       --- ---AtSPL8  --------->MYB46(3)                         <------MYB83 <---------AHL20(2)        ------- -->TOE2(3)--------->ANAC58                  ---------->DOF2  --------->ANAC58               -------- --GT1     --------->ANAC58  --------->TOE2(2)         <------MYB46(1)  --------->AHL20(2)   ------->GAMYB -->AtSPL8 -------->P        --------->TOE1(2)        --------->MYB59   <---------AHL20(2)--------->MYB52(1)   atagttaattagcaaccaaaacaaagaaaaacatatgaaaatggatgcaaagtaagtaggttacacgaagttaattaaatgcaaaccaaaatcaacggta  10853700        --------->At5g28300        --------->DOF5.7(2)     --------->SPL7   <---------SPL7  --------->YAB1 <---------YAB1 -------->ARR11(3)                                                --------->AHL20(1) ---------ARR11(3)                                                --------->AHL20(2)        --------- ------->YAB1                                                     <---------AHL20(2)        --------- --------ICU4               <-----------GT1                      --------->AHL20(2)----------->GT1 ------>HAHB4        --------->LBD16                          --------->AHL20(2)  --------->DAG2 -------YAB1       <-----------GT1           <---------ICU4--------->AHL20(2)--------->ANAC58 ------>ICU4      ---------->ID1        --------->ICU4    --------->AHL20(2) --------->ANAC58 -->At5g28300    <-----------GT1  ----------->GT1     --------->AHL20(2)<---------TOE2(3)<-----------GT1 ->TOE2(3)<---------DOF5.7(2)     <---------ZAT6--------->YAB1<---------AHL20(2) ---------->DOF2-----   atgatcatacggtaacgtttttccccatattaactcgtgttaattagtaatgacaaaaaaataaaaaattaattgaggcaagataaagtttatacctatg  10853800                                                            --------->TOE2(3)                                                         <-----------GT1    <---------YAB1                                     <-----------GT1  <---------ICU4                                      <---------ICU4  --------->ATHB51                                 <---------ICU4  -------->ATHB1                                   <--------ATHB1 <---------YAB1   --------->DAG2                   --------->AHL20(2) --------->AHL20(1)                                <---------AHL20(2) --------->AHL20(2)          <---------ANAC58      --------->YAB1 <---------AHL20(2)----------->GT1                 <---------AHL20(1) --------->ICU4  ---------->DOF2                  <---------ATHB51 >TOE2(2)     <----------ID1 <---------ANAC58     <---------ATHB12  ---------->DOF2 >TOE1(2)--------->ANAC46   <-------TEIL          --------->ICU4  --------->AHL20(2)        --------- ---->YAB1  --------->MYB52(1)<-------GAMYB     --------->YAB1    --------->YAB1       --------->MYB52(1)   aaaattattacacaaaacgaaaagttaatgtgcgttgatagtttcccaactaataattttcacctcaataaaaagaacagtcgcatagcaaacgatataa  10853900  Previous    Next  AGI:  At4g20050.1    Description:  QRT3 (QUARTET 3). similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G20040.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN67113.1); contains InterPro domain Parallel beta-helix repeat (InterPro:IPR006626); contains InterPro domain Pectin lyase fold/virulence factor (InterPro:IPR011050) Range:  from: 10849792    to: 10853356    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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