Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                <---------ZAT18                          <---------ICU4                                                         ----      <-----------GT1    <---------YAB1 <---------AHL20(2)                                     ------ <----------DOF2  --------->YAB1        --------->AHL20(2)                     ----------->GT1 <----- ----DAG2         --------->AHL20(2) ----------->GT1                    --------->At5g28300    <----- ---GT1          <---------ATHB12 <----------DOF2  <---------YAB1      ----------->GT1         ------   ttccttttttgccctcccaattatatcatctttgcactttagttaattagtttctgattttgtctatttcatactgtaattctgtaaatagtctctcgat  10832500                                                                                               <-----                                                                                     ----------->HVH21                                                                             <------------CBF  <-----                                                ------>ZmHOX2a(1)           --------->ATHB12   <-----                           <---------LBD16     --------->TOE2(3)   --------->ANAC55(2)     <--------- -->ZmHOX2a(2)       <---------YAB1       <---------MYB46(3)    <---------AHL20(2) <---------ZAT2 --->ARR11(3)       <---------ARR11(3)   <---------AtMYB61  --------------->AGL15  --------->At4g35610 ----ARR11(3)       --------->ARR11(3) <----------DOF2      <---------------AGL15  <---------At4g35610 ----ARR14(2)<---------ANAC58         <---------ANAC58     ----------------->AGL3  --------->ZAT2   < --->ARR14(2)<---------ANAC58         <---------ANAC58   <-----------GT1   <---------YAB1<----------DOF2   cttcattttgagtttgcttaaatatcatttctgggtttttgctttggttcctaaatttgtttctattttaagtgatgaagattggagctgactttgttgg  10832600         <---------WRKY18(1)        --------->WRKY12     <---------MYB46(3)     --------->ATHB12  <---------AtLEC2         <---------YAB1 -MYB46(1)             <---------TOE2(3)                                                        ----- -MYB83<---------WOX13(1)--------->YAB1                              <---------TOE2(3)         <----- ----MYB46(3)         ---------->DOF2    ------->TEIL                <---------TOE1(3)      <-------- --RAV1(1)        <---------YAB1      --------->ANAC55(2) <---------ANAC58                <---------At4g35610 ---------YAB1  --------->YAB1 <-------TEIL               <---------ANAC58         <---------YAB1   ttttgaatggttgacttatcatgttaaagatgattcatttatgtatttgaagttgtttttgcttacattttgaggttttagtattctgattttgctgatt  10832700       ----------->RAV1(2)    <-------TEIL                           ---------->DOF2 ---->YAB1        --------->YAB1       --------->YAB1                   <---------ZAT6 ----YAB1      <------------CBF<---------TOE2(3)                   --------->YAB1 -YAB1 <---------At4g35610   <---------AHL20(2)                   <---------YAB1  ----------->GT1   ataagtttcatctggtccattgatactcaaatttatgtttttcataaaagtttgcaacttggaaactgatcatagtgtttcaacaggtataatttgatca  10832800                                                                                              -------                                                                      <---------ZAT14        --------                                                                     --------->ALFIN1        --------                                                                <------ZmHOX2a(1)           <--------                                                               <---------At4g35610         --------->ARR11(3)                                                               --------->At4g35610         <---------ARR11(3)                                            --------->ICU4 <-----------TGA1            <---------At4g35610                                       <---------ANAC55(2) <-----------HVH21        <<<<<<<<<MYB1                               <-----------------AGL1     --------->ETT(2)          <<<<<<<<<MYB2                              <-----------GT1--------->ATHB12<-----------RAV1(2)    <---------MYB52(1)      <---------AtMYB61   <----------DOF2 <------------CBF--------->TGA2(1)     <---------ZAT14    <----------DOF2--------->ALFIN1    --------->ANAC55(2)<---------ETT(2)      --------->ZAT14 --------->ANAC58<---------ANAC46     --------->MYB59     --------->bZIP60(1)   <---------ZAT18 --------->ANAC58----------->GT1    <---------ATHB12      <---------bZIP60(1)   --------->ZAT18   <--   aacaagctttggtttagaggggtgaagacttttaactaatcaggtattgatttcgaaatgtcgtcaggagagtgtagcaatgtgcagttagatgatcata  10832900                                                                                                    -                                                                                                    <                                                                                      <------MYB83  <                                                                                      <---------MYB46(3)                                                                                      <------MYB46(1)                                                                                     <---------AtMYB61                                                                      ---------->TaMYB80           <-  --------->YAB1                                    <----------DOF2   --------->ARR14(2)           -- -->TOE1(2)                                       --------->HSFC1(2)  <---------ARR14(2)         ---- ->ATHB12                                      <------ZmHOX2a(1) ---------->DOF2    <---------MYB52(1) ->YAB1                        --------->GLK1(2)  <---------HSFC1(2)  <---------KAN4(2)    <--------- -YAB1             <---------REM1(1)     ---------->DOF2      <---------HSFB2a(2)  <-------GAMYB<---- ----ZmHOX2a(1)<---------WOX13(1)      --------->YAB1         --------->HSFB2a(2) <-----------RAV1(1)   ggaagaataacttagagattgatgaagggagagaatttgaatcaaaagaggaagcttttgagttctacaaagaatatgctaactctgttggttttactac  10833000                                       <---------AHL20(2)                                       --------->ATHB12                                      <---------AHL20(2)                                      --------->AHL20(2)    ---------->DOF2             --------->LBD16  <---------YAB1               --------->LBD16                               --------->ANAC58 -------->ATHB51               ----------->GT1                               --------->ANAC58 --------HAHB4                <---------LBD16                            --------->ANAC58 ---------ICU4             <---------WRKY18(1)                     --------->CCA1(2) --------YAB1             ----------->HVH21                   --------->ANAC58 ------->ICU4            <---------KAN4(2)                    --------->ANAC46              <-------- ----->YAB1             <---------ICU4<---------AHL20(1)      --------->ANAC58              --------- --GT1                  --------->YAB1--------->AHL20(1)   <---------SPL7--------->ANAC58 ----------- -----YAB1     <------NtERF2 <---------LBD16             --------------->AtSPL8---------->DOF2 <-----   cattattaaagctagtcgtcgttcaagaatgaccgggaaatttattgatgccaagtttgtttgtacgcgatatggaagcaagaaagaagacatagatact  10833100                                          ----------->GT1                                         --------->ALFIN1                                        <-------MYC3                                        ------->MYC3  <---------TOE2(3)          --------->ANAC58             <---------WRKY12  --------->MYB59            --------->ANAC58             <---------WRKY38(1) -GLK1(2)         <-----------GT1--------->ANAC58        --------->WRKY18(1) >ARR11(3) <---------WOX13(1)--------->ANAC46           <-----------HVH21               <-----------GT1 >ARR10 --------->ICU4    ------>ZmHOX2a(1)        <-----------GT1                 <----------DOF2 ------------AGL1<-----------GT1 --------->ANAC58  --------->MYB52(1)         ---------->DOF2   ggtttaggtactgatggatttaacattcctcaagcaagaaaacgtggtagaattaaccggtcatcgtcgaaaaccgattgtaaagcttttttacatgtta  10833200                      <---------MYB46(3)                     <--------P                    <---------ANAC46                    <-------GAMYB                    <---------ANAC58                    <---------ANAC58                   <------MYB46(1)                   <------MYB83                  <---------MYB46(3)                 --------->ALFIN1               <---------ZAT2                                                                 -------               <------MYB46(1)        ---------->DOF2                                       <--------               <------MYB83       <------MYB83                                  ------>ZmHOX2a(1)               --------->ZAT2<---------TOE1(2)                         <---------ZAT2       <--------              --------->MYB111(1) ----------->GT1                      <---------At4g35610  <--------              --------->MYB111(2) <------MYB46(1)                  --------->WRKY18(1)     --------->ATHB12              <---------DEAR3(1) --------->MYB46(2)     <---------ARR11(3)     --------->TOE1(3)    <              <---------AtMYB61  --------->MYB59        --------->ARR11(3)     --------->TOE2(3)   --   agagaaggcaagatgggaggtgggttgttcgtagtttggtaaaagaacataaccatgaaatcttcactggtcaagctgattccttaagagaattgagtgg  10833300 -->ALFIN1                                                     --------->ALFIN1 -ANAC58                                               <---------ANAC58 -ANAC46                                     --------->DAG2  <------ZmHOX2a(1)             <--------- -ANAC58  <---------HSFB2a(2)     ---------->DOF2  <------ZmHOX2a(1)                 <-----------GT1 ------ZmHOX2a(1)             <---------ZAT6---------->DOF2<---------TOE2(3)        <-----------GT1 --------->GT1     --------->MYB52(1)  ----------->GT1 <---------ANAC58         <----------DOF2    --   gaggagaaaactcgagaaactaaacggtgctattgttaaagaggtgaaaagcaggaagcttgaggatggggatgttgaaagacttttaaacttctttact  10833400  Previous    Next  AGI:  At4g19990.1    Description:  FRS1 (FAR1-related sequence 1); zinc ion binding. similar to FHY3 (FAR-RED ELONGATED HYPOCOTYLS 3) [Arabidopsis thaliana] (TAIR:AT3G22170.2); similar to FHY3 (FAR-RED ELONGATED HYPOCOTYLS 3), transcription factor [Arabidopsis thaliana] (TAIR:AT3G22170.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41954.1); contains InterPro domain Zinc finger, PMZ-type; (InterPro:IPR006564); contains InterPro domain Zinc finger, SWIM-type; (InterPro:IPR007527); contains InterPro domain FAR1 (InterPro:IPR004330) Range:  from: 10832858    to: 10835710    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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