Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    --------->At4g35610                                  --------->ZAT2                                  <---------ZAT2                                  <---------At4g35610                                 ------->TEIL                              --------->ANAC58                              --------->ANAC58                    --------->GLK1(2)                              --------->ANAC46                --------->YAB1                        =====================================HOX2a_HOX2a                        <------ZmHOX2a(2)             --------->LBD16                       --------->ARR14(2)             ------>ZmHOX2a(1)                       <---------ARR14(2)           <---------LBD16       ---------->DOF2 --------->AGP1               ----------->RAV1(2)         --------->TOE2(2) <-------TEIL         --------->At4g35610      <---------CCA1(2) <---------GLK1(2)       --------->YAB1   agattcatctaaaggaacatcatcagatccaaacgcagctctactactcttatctcctgaactatcagaatctatactaaaacctgtgtaatcgtaatcc  10791000                                                                                                  <--                                                                                                -----                         --------->ARR11(3)                                                     <----                         <---------ARR11(3)                                                    <-----                     ---------->DOF2                                       <---------At4g35610 ------            ------>ZmHOX2a(2)                                              --------->At4g35610 ------            ----------->GT1                     <---------YAB1          ---------->DOF2        ------          --------->ARR11(3)       <-----------GT1  ------>ZmHOX2a(2)  <---------REM1(1)       <-----          <---------ARR11(3)   <---------YAB1 --------->YAB1    <-----------RAV1(2)    <---------YAB1   cattcatctatagatcgtttattgaaagctcttcttataactccattaacatgatcgaagtaaaacccagaagatgaagcagccttgttccgattaagat  10791100                                                     --------->ATERF1(1)                                                     <------NtERF2                                                    <---------ATERF1(1) -------ALFIN1                                  --------->ANAC58 ---->CCA1(2)                         ------>ZmHOX2a(1) --ZmHOX2a(2)                         =================================HOX2a_HOX2a                 <- ----ARR14(2)                        --------------------->WRI1                                    <- --->ARR11(3)                   <---------At4g35610 ------>NtERF2                              <----- --->ARR14(2)                   --------->At4g35610--------->DEAR3(1)                         <------ --->AGP1                <---------GLK1(2)      --------->ANAC58------>ZmHOX2a(2)  <---------GLK1(2) ----ARR11(3)          <---------YAB1--------->TOE2(3)    --------------------->WRI1--------->GLK1(2)   ccacttcttgctcttgctctgcgtcttgattctcatcttcctcattcgaaacgccgtcgtcttcgatcgcatcgtcgtgctcgtcgattctgtcttcggt  10791200                              <---------MYB46(3)                        ------>NtERF2                        --------->LBD16                       --------->DEAR3(1)                       --------->ANAC46                     <---------ATERF1(1)          ------>ZmHOX2a(2)   --------->ABI4(2)          ===============HOX2a_HOX2a          ==================HOX2a_HOX2a         ===================HOX2a_HOX2a         <------ZmHOX2a(2)    --------->MYB55(2)         ================HOX2a_HOX2a        --------->ARR11(3)  <---------MYB52(1)        <---------ARR14(2)--------->ATERF1(2)            <------ZmHOX2a(1)        <---------ARR11(3)<---------DEAR3(1)  --------->At4g35610  --------->ALFIN1   ------>ZmHOX2a(1)       <---------ARR14(2) --------TOE2(3)    <---------ALFIN1         --------->ARR14(2) --------TOE1(3)  ------>ZmHOX2a(1)         <---------GLK1(2) --GAMYB--------->ARR14(2)<---------ATERF1(2)--------->GLK1(2) --------->GLK1(2) ---MYB46(3)------>ZmHOX2a(1)<---------AtMYB61<---------At4g35610   tgaggtagtggatcctcttcctcctccgccggtggtttcaacgtcggaatctgagacgaggacagaatcagggaacaaaactgtgtcttcgctggagcca  10791300                                                                                                 <---                                                                                          --------->RAP2.3(1)                                                                                         ------->GAMYB                                                                                       --------->RAP2.6(3)                                                                            --------->ANAC58     <---                                                          --------->ANAC58  --------->ANAC58    <----                                            --------->ZAT14                --------->RAP2.6(3) ------                                            <---------ZAT14               --------->MYB52(1)   ------           <---------DEAR3(1)        --------->CCA1(2)    --------->ANAC58<---------ARR14(2) <------NtERF2   <---------AtMYB61 <---------At4g35610    --------->REM1(2)             --------->ARR14(2)------>NtERF2   <---------DEAR3(1)--------->At4g35610   --------->ALFIN1            >>>>>>>>>TBF1  --------->MYB52(1)   gagcggaggtgattcggcgagtgagatgagaagagtgagagacgagtgtagagaagtgagacggaagcgagaagaagaacggcagacataacggcgcaag  10791400                                                                                          <---------AHL20(2)                                                                                         <---------AHL20(2)                                                                                    ------>ZmHOX2a(2)                                                                                  --------->ARR14(2)                                                                               ------>ZmHOX2a(2)                                                                              <------ZmHOX2a(2)        ----------->HVH21                                                    --------->ARR14(2)        ----------->TGA1                                                     <---------ARR14(2)       <-----------HVH21        --------->TOE2(3)                           --------->GLK1(1)  --------->ZAT14              <---------bZIP60(1)                       ------->GAMYB   --------->AHL20(2)  --------->ZAT18           <---------MYB52(1)                        --------->MYB52(1)<---------WOX13(1)  <---------ZAT18           ----------->HVH21                     --------->GLK1(2)<------ZmHOX2a(2)  <---------ZAT14      --------->ANAC58                  ============================HOX2a_HOX2a ------ANAC58          --------->ANAC46                  =================================HOX2a_HOX2a ------ANAC58          --------->ANAC58                  =============================HOX2a_HOX2a -----ZAT2           <---------DOF5.7(2)                 ==================================HOX2a_HOX2a --->ANAC58        --------->DOF5.7(2)                   ------>ZmHOX2a(1)  <---------GLK1(1) --->ANAC58<---------ANAC46<-----------HVH21  <---------ATHB12   <---------GLK1(2)<---------ARR14(2)   cttgtgcaccgtgacgggaacgtgaacgccgtgacctcaacatcgccaataactctctcctccgtcggaatctaacggcgatccgatctgatttatttga  10791500                                                                      --------->ICU4                                                                  ------------>CBF                                                                 --------->ANAC46                                                                 --------->ANAC58                                                            <----------ID1                                                          ---------->DOF2                                                         --------->AHL20(2)                                --------->O2             <---------AHL20(2)                   <------MYB83                  --------->ARR14(2)                  --------->WOX13(1)----------->GT1      <-------                  ------->TEIL ------>NtERF2         --------------->AGL15                   --------                  <---------ARR14(2)                 <---------------AGL15         --------->ATHB51                 <---------CCA1(2)                  ----------------->AGL3    ------------>CBF<------MYB46(1)       <------------CBF       <---------ALFIN1      ------------>CBF--------->WOX13(1)  <---------TOE2(3)    ------------>CBF--------->TOE2(3)             <-----------GT1--------->ANAC58  --------->YAB1 ---   attcgttgcaattgagagtgtatcttaaaatgccacctctcactggtctgtttaaccaattaaagacaagcaattagtaaaacaataatcgaggtttggt  10791600                                                                                                    -                                                                                                    <                                                                                                    <                                                                                                    -                                                                             <---------ZAT18      <--                                              ------------>CBF               --------->ZAT14     ====                                        --------->TOE1(2)                    <---------ZAT14     ----         <---------ZAT18                --------->TOE2(2)                  --------->ANAC46  --------         --------->ZAT18           <---------MYB59              <---------ALFIN1             <------- --AtMYB61           <---------ATHB12------>MYB46(1)<---------AHL20(2)  --------->ZAT18      <------- ->MYB59 --------->ZAT14          --------->HSFB2a(2) <-----------GT1   <---------ZAT14--------->ANAC58 --------->CBF       ------------>CBF------>MYB83  --------->YAB1       --------->ZAT14--------->ANAC58   ttcaatatttgtgaactcttgtaatcaatttctcttaccgaacatgcgaacaattttaacatggttccacagcctgcactgaactcttgaagcaagttcc  10791700         <------ZmHOX2a(2)        <---------ARR11(3)        --------->ARR11(3)    ------->MYC2 -------->O2                  <-------MYC2 ---------O2                  ------->MYC3                                                    <------ ---------TGA1a    <-----------HVH21                                                          ------- -------->TGA1a    <-----------TGA1                                                         <--------P -------ALFIN1    --------->ANAC46                             --------->CCA1(2)           <-------GAMYB ===============HOX2a_HOX2a   <-------MYC3                    --------->ARR11(3)       <---------LBD16 -->ZmHOX2a(1)   <---------TOE1(3)                   ---------->DOF2                   <---------ANAC46 ->ARR14(2)      <---------TOE2(3)------->TEIL    --------->TOE2(3)        <---------------AGL15    < --ARR14(2)     <---------DOF5.7(2)     <---------WOX13(1)    <---------ARR11(3)      <---------LBD16 --ARR11(3) <---------YAB1   --------->At4g35610 --------->ANAC46          --------------->AGL15<----   tcacgtctaagatcatgttaacgtcataggcatatgcatttgatggactctacgtaaaaggaaagatttagagtctcccaattttagtctcggggttgct  10791800                                ------>MYB83--------->ANAC58        --------->At4g35610     ------>MYB46(1)        --------->ZAT2        <---------MYB46(2)     <---------At4g35610      <---------MYB59                                <------ZmHOX2a(1)   --------->YAB1             <---------MYB111(1)                     <---------ANAC58 ---At4g35610           <---------------AtSPL8                        <---------ANAC46 -->At4g35610   --------->TOE1(3)           --------->ANAC46          <---------ANAC58 ----------DOF2 --------->TOE2(3)           --------->ANAC58         <---------STY1(2)           <--- -----ZAT18  <<<<<<<ZML2--------------->AtSPL8        <---------TGA1a--------->STY1(2)   <-----------HVH21   cactttcatcagctagaaccttgaagttagtaccaaactcttgtttaagcaatctcacatcggatgtctctagcttgtaggagatgggaatggtcacgag  10791900  Previous    Next  AGI:  At4g19900.1    Description:  glycosyl transferase-related. similar to EMB2745 (EMBRYO DEFECTIVE 2745) [Arabidopsis thaliana] (TAIR:AT5G39710.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61637.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41999.1); contains InterPro domain Alpha 1,4-glycosyltransferase conserved region; (InterPro:IPR007652); contains InterPro domain Glycosyltransferase sugar-binding region containing DXD motif (InterPro:IPR007577); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 10786958    to: 10791443    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g19902.1    Description:  unknown pseudogene Range:  from: 10791832    to: 10791982    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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