Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              --------->YAB1                         --------->TOE1(3)                              --------->GLK1(2)          <---------MYB59--------->TOE2(3)                     --------->GLK1(1)         ----------------->AGL1                                <---------GLK1(1)        ------->TEIL    ----------->GT1<---------At4g35610     <---------ARR14(2)               ----- ------>YAB1       <------ZmHOX2a(2)   --------->At4g35610     --------->ARR14(2)               ----- ------YAB1  --------->MYB52(1)   <----------DOF2      <----------DOF2 <---------GLK1(2)    ---------   tcatagtatggacctaaacggatcaaacgttaataacttttagctcaaaatcagtttcttttgggaattctcagaatttgatgcatcatggagaccatac  10786200                                                                                      <---------ATHB12                                                                                    --------->WOX13(1)                                                                           --------->ANAC58         -  <---------ATHB12                                                         <---------TOE2(3)     ---- ---->ANAC58                  <---------GLK1(2)                            --------->ANAC58    <----- ---->ANAC58         --------->GLK1(2)                                --------->GLK1(1)     --------- >AtMYB61       --------->LBD16--------->GLK1(2)  ---------->DOF2     <---------GLK1(1)--------->YAB1   ccaaatcaaacacaaacccagaaaacctgtaagaatctaatgcaagtatgcacaaagagaaatggaatttggaaatcaaggaaaatcaatcgtgatgatg  10786300                                                                    ------>ZmHOX2a(2)                                                                    =============================HOX2a_HOX2a                          --------->ZAT18                         --------->ARR11(3)                          --------->ZAT14                        -------->HAHB4                          <---------ZAT14                        --------->YAB1              --------->CCA1(2)                        <-----------RAV1(1)              <------ZmHOX2a(2)                        <---------REM1(1)             --------->ARR11(3)                        --------->ALFIN1             <---------ARR11(3)                   --------->ZAT2<---------ATHB12 ----------->RAV1(2)      <---------ZAT18         --------->At4g35610                     =========== ------>TEIL <---------ARR14(2)                   <---------ZAT2<---------YAB1            <------ZmHOX2a(1) ----->ALFIN1--------->ARR14(2)                <------ZmHOX2a(1)--------->ICU4       -------->P ----ANAC46  --------->AGP1      ---------->DOF2  <---------At4g35610               --------->WOX13(1) >ICU4      --------->GLK1(1) <----------DOF2  ============================HOX2a_HOX2a <-----------RAV1(2)   tgtacctgaagacgagatccacgagtagtgaactttgaagcgagagagaggaagctggtgttgctaatgatcgtggaataagacatcaaccaggagctat  10786400                        <---------ARR11(3)                   ------>ZmHOX2a(2)               ----------->HVH21                                          <---------AHL20(2)             ----------->RAV1(2)                                    --------->ANAC55(2)             <---------At4g35610                                    <---------ANAC46             --------->At4g35610                                   <------NtERF2 <-----------GT1           <-----------GT1                                        ------>NtERF2<-----------HVH21          <-------TEIL<---------MYB52(1)                         <---------DEAR3(1)        --------->ARR14(2)             <---------ZAT18           ----------->HVH21                  <        <---------ARR14(2)      <-------TEIL                     --------->DEAR3(1)            ------ =========================HOX2a_HOX2a  --------->ZAT18         <---------RAP2.3(1)         <---------   ataagttgaagattcacctgatccattatctatatacatagtccacaaggcttcagagtcaatttcggcgacgtattaatatgtcactgcttctgtcatg  10786500                 <--------P                <---------ANAC58               <------MYB83         <---------YAB1       --------->YAB1   --------->TOE1(2)<---------ANAC58   --------->TOE2(2)<---------ANAC58  ----------->RAV1(2)<----------DOF2           --------->DAG2 ------>MYB46(1)<-------GAMYB   --------->KAN4(1) -------->P    <---------MYB46(3)              <---------------AtSPL8 ------>MYB83  <------MYB46(1) <---------KAN4(2)----------->GT1   --------->AHL20(2) ---------ALFIN1<---------ANAC58<---------KAN4(1)        --------->TOE2(3)     --------->DAG2      <- --->AtLEC2   --------->MYB59  ---------->TaMYB80<----------ID1   --------->YAB1            <-------- --HVH21 --------->ICU4      <------ZmHOX2a(1)---------->DOF2     *TSS        ---------->DOF2      --   cccaacctgtgataatttggttgctttcggaggaatattcaattcaaaaaaagtacaaacctttgcaataaaaaaaaaaaaaaagttcacatttttgcta  10786600                                          <---------ALFIN1                             --------------------->WRI1               <----------DOF2 --------AHL20(2)         --------------->AGL15                    ---------->ID1            <------- ---GT1                   <---------------AGL15                 --------------->AtSPL8       <------- ------->AHL20(2)        ----------------->AGL1               <----------DOF2                --------   cttaattagtgtccctgtttaaaactggccacttagagaaaatcccacttctattttgtcaaaacttttgtacttttacatcagtaacaacttaatcacc  10786700                                           <---------WOX13(1)                                        <---------YAB1                                    --------->GLK1(2)                                    --------->ARR11(3)    <---------ZAT14                <---------GLK1(2)                     --------->YAB1            <- ----GT1                        <---------HSFB2a(2)         <-----------HVH21                -------- --ICU4                         --------->HSFB2a(2)        --------->ANAC46              <---------ALFIN1 ->YAB1            <-----------RAV1(1)--------->YAB1<-------TEIL        <---------YAB1 <---------ALFIN1   acagagtgaagaacattggttttgttgttcatgtctagaatcttgatagatagattcatacccttcacttggtgataatagtctaaatcccactctccag  10786800                                ----------->RAV1(1)                    ------>NtERF2                    ----------->RAV1(1)                   <---------ETT(2)                   <----------ID1--------->At4g35610                 --------->ANAC46<---------At4g35610               =============================RAV                 <---------ATERF1(1)               <-----------RAV1(2)                            <---------LBD16            --------->ZAT14  --------->ANAC46                --------->ANAC46           ------>ZmHOX2a(2)            <---------ZAT14  --------->ANAC58              ---------->DOF2              --------->MYB46(3)     --------->GLK1(2)   ---------->DOF2                  ---------->CDC5         <---------ANAC58    <---------GLK1(2)<------NtERF2              <-----------HVH21<------NtERF2    <---------ANAC58 ---------DOF2 =================RAV ---------->DOF2     --------->TOE2(3)  --------->LBD16  --------- ->ZAT14  --------->ANAC46   --------->ANAC58  --------->bZIP60(2)         <---------LBD16 --------->ANAC46   tctttagaatctactgaacaggcgacaaaaaacgcagcaaaagcataccatgtcattgcctcaacgcggctacattccacggtttcttgatccaccacaa  10786900                                                                         <---------ARR14(2)                                                 --------->ZAT6          --------->ARR14(2)                                  <-----------RAV1(1)                    <---------GLK1(2)                            --------->ANAC58     <---------ICU4        ----------->ARR10   <---------GLK1(1)        --------->ANAC58    <---------ATHB12    --------->HSFB2a(2)   -----------  <---------ARR14(2)      ---------->DOF2--------->At4g35610       <---------LBD16<-----------HVH21  --------->ARR14(2) ----------->GT1--------->ALFIN1       <---------ZAT18--------->GLK1(2)      <--- >AtMYB61           <---------------AtSPL8      --------->ICU4    ------>ZmHOX2a(1)     <---------ATHB12   tgtggatttgctattcaaacagagagtacaaagcaactgtgggagatgtaatcactactagcctactcctctggagattctctcagtcaaatcagtaaca  10787000                                                         --------->At4g35610                       --                                            ----------->GT1                                       >>>                                           <---------TOE2(3)                                      >>>                                        <---------MYB52(2)                                      -----                                       --------->At4g35610                          <---------HSFB2a(2)                                       --------->ZAT2 ======================HOX2a_HOX2a         <----                                       <---------At4g35610--------->ZAT6   ----------->RAV1(1)  -----         ----------------->AGL1  ---------->DOF2      <------ZmHOX2a(2) --------->HSFB2a(2)     <---- >GT1  <-----------GT1         <---------ZAT6    --------->ZAT6      ------>ZmHOX2a(1)---------->DOF2 ------TOE2(3)             <---------ZAT14 <---------TOE1(3)  --------->ZAT14       --------->HSFB2a(2)   aggttgtttttgccagactcagaacaagctgtagtgaaagcagctaaggtaacacgatcagcactactgtccttctccaacaatttctgaaagaacagag  10787100  Previous    Next  AGI:  At4g19880.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G45020.1); similar to Intracellular chloride channel [Medicago truncatula] (GB:ABC75353.2); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Glutathione S-transferase, C-terminal-like (InterPro:IPR010987); contains InterPro domain Glutathione S-transferase, C-terminal (InterPro:IPR004046); contains InterPro domain Glutathione S-transferase, predicted (InterPro:IPR016639) Range:  from: 10784401    to: 10786566    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g19900.1    Description:  glycosyl transferase-related. similar to EMB2745 (EMBRYO DEFECTIVE 2745) [Arabidopsis thaliana] (TAIR:AT5G39710.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61637.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41999.1); contains InterPro domain Alpha 1,4-glycosyltransferase conserved region; (InterPro:IPR007652); contains InterPro domain Glycosyltransferase sugar-binding region containing DXD motif (InterPro:IPR007577); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 10786958    to: 10791443    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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