Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          --------->YAB1                                <------NtERF2                  --------->YAB1                                    <---------ANAC46                 --------->ICU4                                    <---------LBD16                 <---------YAB1                                  --------->ALFIN1            <XXXXXXXXXXXXXXXXXXXXMIR414                        --------->CCA1(2)            --------->YAB1                                <---------YAB1                         <---           <---------YAB1 <---------YAB1               --------->GLK1(2)                   <---------YAB1     <---------ETT(2)  <---------YAB1                 --------->ARR14(2)                   --------->ICU4  ------->GAMYB--------->YAB1    <---------LBD16      <---------GLK1(2)                  ----------->GT1 <------------AtMYB77--------->YAB1                   --------->ARR11(3)                <---------AtMYB61 ---------At4g35610 --------->ICU4                    <---------ARR14(2)                --------->ALFIN1 -------->At4g35610 <---------YAB1 --------->LBD16   <---------HSFB2a(1)             <---------DEAR3(1) -->At4g35610 <---------YAB1    <---------ANAC46     <---------HSFC1(2)     ----------->HVH21   ----- ---At4g35610 --------->ICU4 <-----------RAV1(1)     --------->HSFC1(2)----------->ARR10<---------DEAR3(1) -->ZAT2   --------->ICU4 --------->ICU4             --------->HSFB2a(1)  ----------->GT1<---------MYB46(3) ---ZAT2 --------->YAB1--------->ICU4               ----------->ARR10--------->LBD16<---------ORA47(1)   gcaactgtcgatgatgatgatgatgatgatgatggtgcggaagaacgagatgcgaagattctgagagatggcggagatgtgaaatggacggtggtgatta  10773900                                     --------->YAB1                                     <---------ICU4                                     <--------HAHB4                                   <---------ARR11(1)                                  <---------ARR14(1)                               --------->ANAC58                            <---------ABI4(2)                            --------->MYB46(3)             <---------AtMYB61 --------->ANAC58                           <---------AHL20(2)        ------>MYB46(1)    --------->ANAC58                         ----------->GT1        -------->P    --------->ANAC46                            ---------->DOF2        ------>MYB83  --------->ANAC58                    <---------AHL20(2)      <---------MYB46(2)--------->ANAC46                 --------------->AGL15   <---------TOE2(3)      <---------MYB111(1)  --------->ANAC58  <----------DOF2   <---------TOE2(3) --------------->AtSPL8  <---------At4g35610 --------->ANAC58    <-----------GT1<---------------AGL15   <---------------AtSPL8 ------TOE2(3)     <---------REM1(2)<---------ATHB12  <---------AHL20(2) --------->YAB1 ---->MYB52(1)  <---------ANAC46--------->DEAR3(1)<----------DOF2<------ZmHOX2a(1)   <-------TEIL  <-   agggagcacctactagtggtgtccacgcgaagcaccgaatcatttttctttcctttttattttataaggaaagtataaaaatgaaggtacacatattcta  10774000                                                         <---------YAB1                                                  <------MYB46(1)                                                  <------MYB83      ------>NtERF2                  --                                                <<<<<<<<<MYB98   --------->At4g35610              ---                                                <--------P       <---------At4g35610           <-----        <-----------HVH21        *TSS          <-------GAMYB <---------MYB46(3)               ------- ---------DOF2         --------->ALFIN1   <------------CBF   --------->MYB52(2)     <---------ZAT6---   gcttttgagaggtcagaactcagaagtggatggaatttgatttggattgggttgggattacgatagttgctgccaaaacctttctagtggaaacaagaat  10774100                                                    ---------->DOF2                                                  --------->ANAC58      <------------CBF                            --------->ANAC58                         --------->DAG2  <-------TEIL                                    <---------ANAC55(2)                  <------ZmHOX2a(1) ------->At4g35610                        --------->DAG2       <---------YAB1         <----------ID1 ------>ANAC58                    ----------->GT1 --------->ANAC55(2)                ----------->GT1 ----KAN4(2)              <----------DOF2---------->DOF2----------->GT1     <----------ID1---------->DOF2 -->YAB1                  --------->TOE2(3)  <---------ZAT6    <---------TOE2(3) ---------->DOF2 <--- ------>ANAC58  <---------DAG2    <---------ANAC46<---------YAB1     ------------------------>ANAC81   aagctacatattgtattcccttatcaaactttagttttgtgaataaagtgttacgaaagtgtaataagatagatgaaaaaaacaaaagaggaaaaagtag  10774200                                                                       <----------DOF2                 <---------AHL20(1)                                   <---------ANAC58                 --------->AHL20(2)                             <---------AHL20(2)             ------                 <---------AHL20(2)                  --------------->AtSPL8                <---------ZAT14                 --------->AHL20(1)       --------->STY1(1)    --------->AHL20(2)  *TSS  <-----------        <---------YAB1              <----------DOF2  <---------------AtSPL8    <-----------HVH21 ---ZmHOX2a(1)  --------->AHL20(2)  <---------DAG2----------->TBP     <---------ANAC58   <-----------   gagataaaacatgatagaataaattcttgatcaaacccctttacctagggctatatatgtacacatttaatagcttttctctgtcaagttgaatgtactg  10774300                                                                           ------>MYB46(1)                                                                           ------>MYB83                                                                         <---------MYB59                                                                   <---------ICU4                           <-------TEIL                            -------->ATHB1                      --------->AHL20(2)                           <--------HAHB4   <---------ARR11(3) <---------AHL20(2)                           --------->YAB1 <---------YAB1     --------->YAB1                                 --------->ATHB51 --->ICU4       --------->YAB1                        <---------ICU4  <-----------GT1 ----AtSPL8 <---------AHL20(2)                   --------->ANAC58 --------->ICU4 <---------ARR11(3) - ----AtSPL3 --------->AHL20(2)                   --------->ANAC58 <---------YAB1 --------->ARR11(3) -   atcaagataacaaatttatcaaaaataaatacatcatactggtttatgagcaagaaacattgctcagaattattaccaaataagatgtttagaaaccaag  10774400                                       ----------->HVH21                                 <---------ALFIN1                                 --------->DEAR3(1)                       ---------->DOF2<-----------HVH21                   --------->ZAT14 <------NtERF2                   <---------ZAT14------>NtERF2                                             ------>NtERF2               --------->LBD16  --------->ATERF1(1)                                     --------->ALFIN1              <---------LBD16   <---------ABI4(2)                               --------->ANAC58             ------>ZmHOX2a(2)--------->ANAC46                                  --------->ANAC46       <---------ANAC55(2)    --------->ANAC58                      --------->At5g28300<-----------HVH21       --------->ANAC55(2)    --------->ANAC58<----------DOF2      ------->GAMYB--------->ANAC58 -------->ANAC58  --------->ALFIN1--------->MYB52(1)    ---------->DOF2       <---------ALFIN1 -------->ANAC58--------->LBD16 --------->ERF1<---------DAG2       ----------->GT1 --------->MYB52(1)   actcgaaatacttgatcccggtgcagaaagaagcgccaccggtgacaactttaccgatgaaagcttcaacggtgaaatctccacacaactgtgaggccat  10774500                     =================HOX2a_HOX2a                     ------>ZmHOX2a(2)                    ==================HOX2a_HOX2a                    <------ZmHOX2a(2)               ------>ZmHOX2a(1)               =============HOX2a_HOX2a              --------->TOE1(2)             =========================HOX2a_HOX2a             ------>ZmHOX2a(2)            ==========================HOX2a_HOX2a            <------ZmHOX2a(2)           --------->ARR11(3)           <---------GLK1(2)           <---------ARR11(3)           <---------ARR14(3)           --------->ARR14(2)           <---------ARR14(2)           --------->AGP1           --------->ARR14(3)           <-----------ARR10          <---------GLK1(1)                                                               <-------TEIL          --------->GLK1(1)                                                     --------->ANAC58          <---------At4g35610                      --------->ZAT2               --------->ANAC58         ----------->ARR10                    --------->ZAT14                   --------->ANAC46      --------->ANAC58             <---------MYB52(1)                        --------->TOE1(2)    ===      --------->ANAC58         ------>ZmHOX2a(1)   --------->At4g35610      --------->ANAC58      <--     <-----------------------TaNAC69(2)       <---------ZAT14               --------->ANAC58  <------   tctcagagacgcagatcctccgatctctctctcctctgttaatctctctgaacagctacggtctggtgttttcttgaaacccaagaaacaggttcatatt  10774600                          <---------------AGL15                          --------------->AGL15                --------->TGA1a                             <---------MYB52(1)                <---------TGA1a                            <----------DOF2             <---------ZAT18                              <----------DOF2           <---------At4g35610               --------->ANAC46    <---------TOE2(3)    ----------------->AGL3   --------->MYB52(1) =========================bZIP_DOF           --------->ANAC58 --------->MYB59         --------->ARR14(2) --------DOF2--------->ZAT18                 --------->ANAC58 <---------TOE2(3)       <---------ARR14(2) ---GLK1(2)--------->At4g35610          <-----------GT1 ------>NtERF2              --------->ANAC46   ctttttaagaattagctcacttgtgtttctattttcagaaaataactacgcaaaacggagcctttaggtaaacaaaattgcaaacacagaacttctggtt  10774700                                                    <---------At4g35610                            <-         ------->TEIL                     <---------AHL20(2)                             ---------->DOF2        <---------GLK1(2)          --------->At4g35610<------ZmHOX2a(2)           <------MYB46(1)<---  <---------AHL20(2)          --------->DAG2        --------->At4g35610        <---------AtLEC2  ----  --------->AHL20(2)         ---------->DOF2   --------->YAB1                <---------YAB1     -----  --------->AHL20(1)      --------->AHL20(2)  --------->ICU4    --------->MYB52(1)<------MYB83  <---- --------->AHL20(2)     --------->YAB1    --------->AHL20(2)  <---------MYB52(2)--------------->AGL15   caaaaaaattgaatctctcatttctaaaataaaaagtagcttaaaaaaatgatcagatcacaaaacaaacgtttccattctgcttggtttagaaagacat  10774800  Previous    Next  AGI:  At4g19830.1    Description:  immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein. similar to immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein [Arabidopsis thaliana] (TAIR:AT5G13410.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41973.1); contains InterPro domain Peptidyl-prolyl cis-trans isomerase, FKBP-type; (InterPro:IPR001179) Range:  from: 10772412    to: 10774033    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g19840.1    Description:  ATPP2-A1 (Arabidopsis thaliana phloem protein 2-A1). Identical to Protein PHLOEM PROTEIN 2-LIKE A1 (PP2A1) [Arabidopsis Thaliana] (GB:O81865;GB:Q8LDY2); similar to ATPP2-A5, carbohydrate binding [Arabidopsis thaliana] (TAIR:AT1G65390.1); similar to unknown [Populus trichocarpa] (GB:ABK95033.1) Range:  from: 10774283    to: 10775911    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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