Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          --------->SPL7                   <---------At4g35610                                      ---      <---------SPL7                     --------->At4g35610                                      ---    --------->ANAC58                     <---------ZAT2                                           ---    --------------->AtSPL3               --------->ZAT2            <---------At4g35610           <---    --------->ANAC58                   <-----------RAV1(2)  <---------MYB52(1)                  -----   <-------TEIL                       --------->LBD16---------->DOF2                       ------->GAMYB   --------->SPL7             ----------->GT1      <------ZmHOX2a(2)                      --------->MYB46(3) <---------SPL7           <------ZmHOX2a(1)       <---------ARR11(3)                    --------->MYB52(1) --------------AtSPL8     ================================HOX2a_HOX2a                  ---------->CDC5 --------------AtSPL3  <---------HSFB2a(2)        --------->ARR11(3)                  <------NtERF2 ------->AGL1          --------->HSFB2a(2)      --------->ICU4<---------SPL7       ------>NtERF2<----   cagggtacggtaccccttggtaattcgaggagtagtaaaccgcagctgtcaagatcaaagccgttgtaccgctgctattggactcggcctcaacggccga  10761700                         --------------->AtSPL3                         <---------------AtSPL3                         --------------->AtSPL8                         <---------------AtSPL8                     --------->LBD16                    --------->ANAC46                                                            -----                    --------->LBD16                                                          --------                   ----------------->AG                                                      ------>MYB83                   --------->HSFB2a(2)                                                       ------>MYB46(1)                   <---------HSFB2a(2)                                                 --------->ANAC58             <-----------ARR10                                                         --------->ANAC58           <---------MYB52(1)                                                         --------->SPL7-         --------->HSFB2a(2)                                                         <---------SPL1(1)         <---------HSFB2a(2)  --------->REM1(1)                                     <---------SPL7 -- ------>ANAC58    <-----------------AGL1                                          --------------->AtSPL3 --->ZmHOX2a(2)<---------ANAC58                 <---------LBD16                   --------------->AtSPL8 ------>ANAC58 <---------ANAC58                 <---------ANAC46                  <---------------AtSPL3 ---ZmHOX2a(2)--------->At4g35610              <---------LBD16                  ------------------>SPL14 ---->ARR14(2)<---------HSFC1(2)           <---------CCA1(2)                --------->AtLEC2 -------- -----ARR14(2)--------->HSFC1(2)        ------>ZmHOX2a(1)               ------>NtERF2--------->SPL1(1)   tcgccattcttccagtagcttcccgaaatcgtacatctcttcctcgtttctcgggtactcccagtctaggtcgaggccatggaagccgtacgacctagca  10761800                                                                                   ------>NtERF2                                                                                  --------->DEAR3(1)    <---------WOX13(1)                   --------->MYB52(2)                       <---------ALFIN1  <---------MYB46(3)                   <--------P                              --------->ANAC46 <---------YAB1                     <------NtERF2                            <---------At5g28300 ---->MYB52(1)                   --------->ALFIN1                         <----------DOF2 ->ANAC58                        --------->ATERF1(1)                     <---------ICU4 -------->At5g28300        <---------LBD16<---------ANAC58              --------->ICU4 ----->GAMYB              <---------ANAC46<---------ANAC58              --------->At4g35610 ->ANAC58               ------>NtERF2 <-------GAMYB              <----------DOF2------>NtERF2   acggtgattgtcgattgaatgaacgatgccctggagtcggggttacttgccatggatgcgaacgcgtctttgtcagcattaccgccacctattgacaaga  10761900                                                         <------MYB46(1)                                                         <------MYB83              --------->GLK1(1)                       <---------ANAC46              <---------GLK1(1)                       <---------ANAC58             <---------ARR14(2)                       <---------ANAC58                              <            <------ZmHOX2a(1)                    <---------AtMYB61--------->ALFIN1          ---------      <---------ANAC58                           --------->ALFIN1------->MYC3               ---------      <---------ANAC58                         <XXXXXXXXXXXXXXXXXXXXMIR166A-G               <--------     <---------TOE1(3)                    <---------ANAC46       <-------MYC3               <--------     <---------TOE2(3)                    <---------ANAC58      <---------O2     <---------ANAC46   -    <-----------GT1  <-------GAMYB    ---------->DOF2<---------MYB46(3)          <---------ANAC58---- <----------DOF2    <-----------RAV1(1)   <---------ANAC58      --------->O2     <---------ANAC58<---   gtgttttaacgtgaggatttctctgttggacagtctctgtaaaagcgtggaatggtgcttggttccatgtggcgatagtgatttcgtatgactcagcttc  10762000                                                                                               <-----                                                                                               <-----                                                         ============================================  ------>ZmHOX2a(2)                                      ---------->DOF2                       ------ <------ZmHOX2a(2)                                      <------NtERF2                          ====== ---------ARR14(2)                                     --------->LBD16 <------NtERF2           ====== >At4g35610                                            <------NtERF2  --------->LBD16          ------ >ZAT2                                                --------->RAP2.6(2)                      <----- -ZAT2                            >>>>>>>>>NAM       <---------ANAC46<---------LBD16           ------ -At4g35610                   --------->DAG2         <---------LBD16<---------LBD16      ----------->HVH21 -------->ARR14(2)           ---------->DOF2     --------->LBD16    <---------ANAC46   ============== ----->HSFB2a(2)        ----------->GT1         <---------ANAC58<---------At4g35610    <----------DOF2 ------HSFB2a(2)      --------->ALFIN1          <---------ANAC58--------->At4g35610 ------->TEIL<----   gagatcggcaaatgtacagaagaggtgagtgaaaagggatgagtcgatgtccgtggccggaaagtcagtagccgggaaccagtatgaagctttgacgacg  10762100 ----bZIP60(1) ----O2 ====bZIP_DOF                                                                                    <--- --->O2                                                                              --------------->AGL15 =====================================bZIP_DOF                                  <---------MYB52(1) =====================================bZIP_DOF                                  --------->DOF5.7(2) --->bZIP60(1)                                             --------->YAB1      <-------GAMYB     ---- ----TGA1a                                         <---------ANAC46           --------->MYB52(2)<---- --->TGA1a                 <----------DOF2 <-----------RAV1(1)        <------ZmHOX2a(1)<-----------TBP ====bZIP_DOF      --------->ETT(2)      <----------DOF2----------->GT1      <-------TEIL<---------AHL20(2) -------HVH21  <---------AtMYB61---------->DOF2    <----------DOF2  <---------TOE2(3)<---------------AGL15   tcggactcagacattttttggtcgagagtcttttaaaagaatgctttgttgtgctttgtagtaataaactgaggatgggttcgttatctatttatagagg  10762200           <---------RVE1(1)           <---------CCA1(1)          <---------AHL20(1)          --------->AHL20(1)                                       --------->ANAC58          --------->ARR11(3)                                   --------->MYB46(3)          <---------ARR11(3)                           <---------ICU4         --------->YAB1                               <---------AHL20(2)        ----------->ARR10                             <---------YAB1 ------ARR14(2)                                     --------->YAB1 --------->ANAC58              <--- ----->ARR14(2)                                   <-----------TBP--------->MYB52(1)           ------- --ZmHOX2a(1)                               <------------CBF<----------ID1              --------->CCA1(2)   atttagggcaaagatatttttagtttctgaacataaacaaactcaacattgaatttataatttcgacaaacgaaaatgtctctggtgaagatgtgagtgg  10762300                                                                        <---------CCA1(1)                                                                       <---------ARR14(2)                                                                       <---------ARR11(3)                                                                ---------->DOF2                                                          --------->HSFC1(2)                                                          <---------HSFC1(2)                         <---------YAB1                 <---------ARR11(3)                         --                        --------->AHL20(2)              <---------GLK1(2)                          --                        <---------AHL20(2)              --------->ARR11(3)              <---------MYB59          --------->ANAC58                             --------->YAB1  --------->ARR14(2)          -- ------PCF2        <---------TOE2(3)--------->GLK1(2)<---------------------WRI1         --------->TOE2(3) -->ALFIN1--------->ANAC58 <------------CBF         ---------->DOF2  ----------->GT1 <-----------GT1   gacaccacaaacaagctcgtttagattaaaattgaaacattctgttcacatattcaaagatacttccaaagtggatatttctattagataccttattcaa  10762400                       --------->AHL20(2)                       <---------AHL20(2)                      --------->AHL20(2)                      <---------AHL20(2)                      <---------AHL20(1)             --------->ARR14(2)             <---------ARR14(2)                                                            --------->CCA1(2) --------->AHL20(2)   --------->AHL20(1)                                        <---------ZAT14 ------->ANAC58 --------->ANAC58                <<<<<<<GRF7                     --------->ZAT14 ------->ANAC58 --------->ANAC46              ------>ZmHOX2a(1)                 --------->REM1(2) --------->GT1  --------->ANAC58              ----------->HVH21         --------->GLK1(1) <---------ARR11(3)   caagaaaataacaagtatacgaaatttaattgttaaggcctctagttcctgacaagttcaatgtcgaagatgagagttccagtgtagaactagatataag  10762500                                        <---------------AGL15                                        --------------->AGL15                                       ----------------->AGL1                                       ----------------->AG                                     <----                                       <-----------------AG                                     <----                                       ----------------->AGL2                       <---------AHL20(2)                                       ----------------->AGL3      ----------->RAV1(1)    <---------YAB1                                     <-----------GT1        ----------->HVH21   <---------RVE1(1)                                   <----------DOF2        --------->ANAC55(1)  <---------ARR11(3)                           <---------AHL20(2)             --------->ANAC46     --------->ARR11(3)                          <---------AHL20(2)   <---------TOE2(3)------->GAMYB --------->YAB1   <-----                 <---------WOX13(1)<---------DAG2     <-----------GT1        <---------YAB1   <------  <---------MYB52(1)      --------->AHL20(2)--------->AHL20(2)  --------->ANAC46<---------CCA1(1)   tatcgttcgtcttcaatggattgatcaatttaatccactttaccaatttaagaaatttacatgtaacagcaacattcttatgatatttttttgttattaa  10762600  Previous    Next  AGI:  At4g19800.1    Description:  glycosyl hydrolase family 18 protein. similar to glycosyl hydrolase family 18 protein [Arabidopsis thaliana] (TAIR:AT4G19810.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24276.1); contains InterPro domain Glycoside hydrolase, family 18, catalytic domain; (InterPro:IPR001223); contains InterPro domain Chitinase II; (InterPro:IPR011583); contains InterPro domain Glycoside hydrolase, catalytic core; (InterPro:IPR013781) Range:  from: 10760840    to: 10762114    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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