Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           --------->ANAC58         --------->ANAC58       ---------->DOF2    <------NtERF2                                        --------->ANAC58   <-----------HVH21                                     --------->ANAC58   <---------RAP2.6(3)                                   ------>ZmHOX2a(2)  --------->RAP2.3(3)                                   <------ZmHOX2a(2)  --------->RAP2.3(2)                                   --------->GLK1(1)  --------->RAP2.6(2)                                  --------->ARR14(2) --------->RAP2.3(1)                                   <---------ARR14(2) -------->At4g35610                                <---------LBD16                                  - -------->ZAT2                                    ------->GAMYB                            <---------At4g35610 ---------At4g35610                             --------->At4g35610                        --------->At4g35610 ----->NtERF2                --------->SPL7     <---------At4g35610             --------->LBD16     < ---------ATERF1(1)          <-------TEIL       <---------ZAT2                 --------->LBD16     <- ------->DEAR3(1)         --------->LBD16   --------->TOE2(3)                 <---------HSFB2a(2)---- ------>ERF1---------->DOF2<---------MYB52(1)   --------->ZAT2                --------->HSFB2a(2)---- ----->At4g35610        <---------LBD16     --------->AtMYB61                <---------LBD16   <-----   gcagccgtcaaaagcaaaggccttattccggtacgttgagactcgacctcaactgcggatcgccattcttgaagtagtttcccgaagttgttcatctcca  10740200                                                  ------>ZmHOX2a(2)                                                 <------ZmHOX2a(2)                                                 --------->CCA1(2)                                ---          <---------ZAT18                       --------->AGP1                                    <--         <---------ANAC58                       --------->ARR11(3)                               <---         <---------ANAC58                       >>>>>>>>>GATA-3                                  ----        <---------------AtSPL8                  >>>>>>>>>GATA-2                                 -----        --------------->AtSPL8                  <---------ARR11(3)                              <----    --------->ATHB12            <-------TEIL    >>>>>>>>>GATA-4                                <----- -------->ATHB12          <------ZmHOX2a(2)     >>>>>>>>>GATA-1                               <------ ---------ICU4           --------->AGP1        --------->GLK1(1)                     <---------HSFB2a(2) --------YAB1           --------->At4g35610--------->LBD16            --------->ANAC58       -------- ----->bZIP60(2)   --------->ANAC58    --------->ARR14(2)             --------->ANAC58       -------- ----->ANAC46      --------->ANAC46    <---------ARR14(2)      <------ZmHOX2a(2)  --------->GLK1(2) - ----ALFIN1        --------->ANAC58 --------->AHL20(2)   <------ZmHOX2a(2)       <---------GLK1(2)<--   catcattgtttgggtactcccaagccagatcaagtccataaaatccgagagatctagcgatcgagatcgaagacgaaatgaacgattctcgagaggtgcg  10740300 <---------ANAC58 <---------ANAC58                                                        <---------TOE2(3) ------>ARR14(2)                                   <---------ETT(2)      <---------YAB1 -------ARR14(2)                                  <------ZmHOX2a(2)      <---------TOE1(3) ----GAMYB                                       --------->ARR14(2) --------->ANAC55(2) ----->At5g28300                                 <---------ARR14(2) --------->ANAC46 ------>GT1                                    --------->DEAR3(1)   --------->ANAC58 -----MYB46(3)         --------->GLK1(2)      <------NtERF2         --------->ANAC58 ----ANAC46 --------->ANAC58                 ------>NtERF2       <---------REM1(2)     --------->MYB52(1) -TEIL      --------->ANAC46                 --------->LBD16 --------->ARR14(2)       ----------->HVH21 ->ALFIN1   --------->ANAC58            <-----------GT1      <---------ARR11(3)       ----------->TGA1 ---->AtMYB77          --------->ARR14(2)   --------->ANAC46 <---------ARR14(2)     ----------->RAV1(2) -------->MYB52(2)     <---------ARR14(2)  <---------LBD16   --------->ARR11(3)   <-----------GT1 -------MYB52(1)---------->DOF2    <---------MYB52(1)        <-----------ARR10 <-----------GT1    ---   gttacttgccatggacgcaaacgcgaatttgttgtctgtttttttcccgccgatcgacaagagggtcttcacgttatggtttttctacctgacgatttca  10740400                                                                           <------NtERF2                                                                      <---------DEAR3(1)                                                                ------>ZmHOX2a(2)                                                               <------ZmHOX2a(2)                                                               --------->CCA1(2)                   <---------ANAC58                           <---------ARR14(3)                --------->ARR14(2)                            --------->AGP1          --------->GLK1(2)                                   <---------ARR14(2)          --------->ARR14(2)                                  --------->ARR14(2)          <---------ARR14(2)<---------LBD16                   <---------ARR11(3)     ----------->GT1     <----------DOF2                      --------->ARR11(3)         <---------ZAT14    --------->ALFIN1    <----------DOF2                      <---------GLK1(1)           --------->ZAT14 <---------AtMYB61 <---------ANAC58        <-----------RAV1(1)--------->ARR14(3) --------->DAG2 -------->HVH21 <---------ARR14(2)      --------->GLK1(2)   ----------->ARR10  ---------->DOF2   gtgaaggtggagaattcgtattcgtgcctttgggggatgaagactctgtgggtttcaaggtcgagatctgcgaaggcgcagaaaaggtgagtgaagagag  10740500                                                 <------MYB83                                                 <------MYB46(1)                                            <------MYB83                                            <---------MYB46(3)                                            <------MYB46(1)                                           <---------AtMYB61                                          <--------P                                          <---------MYB55(1)                                         <---------MYB52(1)                                  --------                                         <-------GAMYB                                       <-------                       --------->ALFIN1 <---------MYB46(3)    --------->LBD16             <----------                    <------ZmHOX2a(1)   <---------DEAR3(2)   <---------HSFB2a(2)          --------->ARR14(2)              <---------At4g35610      --------->ATERF1(2)   --------->HSFB2a(2)      <---------LBD16              --------->At4g35610      <---------ATERF1(2)<---------SPL7       <----------DOF2-------          <------ZmHOX2a(1)          ------------>AtMYB77--------->DEAR3(1)  <------NtERF2<---------ARR14(2)          <---------ICU4         --------->ZAT6 --------->MYB59              <---------At4g35610  ===        <---------TOE2(3)       <---------ZAT14 <---------AtMYB61            <---------ZAT2 <--------       --------->YAB1  <-----------RAV1(1)<---------MYB52(1)<---------LBD16  --------->At4g35610  <--   ttgagtcaataaggattgctgaggactgtgggattacactgccggttggtttggtttcgccatccggaaaccagtaggcagcttttactacgggtccgga  10740600          --------->GLK1(2)      --------->LBD16    ------>ZmHOX2a(2)   <------ZmHOX2a(2)  --------->GLK1(2)  <---------ARR14(2)  --------->ARR14(2) <------ZmHOX2a(1) ->HSFB2a(2) --HSFB2a(2)         --------->WOX13(1)                                              <----------DOF2 -HVH21   --------->ARR14(2)                                                  <-------GAMYB -->LBD16 <---------ARR14(2)     <---------HSFB2a(2)                         <-----------RAV1(1) ==========HOX2a_HOX2a           --------->HSFB2a(2)       <---------DAG2    --------->MYB52(2) -LBD16  <---------GLK1(2)    *TSS      <----------DOF2    <----------DOF2   <---------MYB46(3) ----ZmHOX2a(1)   --------->GLK1(2)  --------->GLK1(2)  <---------YAB1 <----------DOF2       <-------   ggaggatccgagaatctgagaatcagtcatttcttcgagactcttttttagcaaaattatgctttatgtgtttctttgtttgttgtgctttagtagtgat  10740700                                                  --------->ARR11(3)                                                  <---------ARR11(3)                                                 --------->GLK1(1)                                                 <---------RVE1(1)                                                 --------->RVE1(1)                           <---------YAB1        <---------CCA1(1)                          <-----------TBP        --------->CCA1(1)                        <---------------AGL15    <---------GLK1(1)                        --------------->AGL15   <---------ARR11(3)                  <----------DOF2   --------->GLK1(2)              <----------DOF2      <---------ARR11(3)         --------->AHL20(2)             <---------ANAC58      --------->ARR11(3)         <---------AHL20(2)                 ----     ---------->DOF2    <----------DOF2         --------->ARR11(3)  ---------->DOF2           <------ZmHOX2a(1) --ZAT6      <---------ANAC58      <---------GLK1(2)       --------->YAB1          <----------DOF2  <   acaaactgaaagggtgctttctttctctttttatagagattttgggagtagatatcttgaataataaaacaaaagacaaattcaactttgaatttaggag  10740800          --------->MYB52(2)                                          ---------->DOF2        <--------P                                              ----------------->AGL3      <---------MYB46(3)                          <---------------AGL15  --------->ATHB12                           <----------DOF2  --------->bZIP60(1)                ---- <---------AHL20(2)                    ---------->DOF2        <---------bZIP60(1)    --------->YAB1 ------->GT1                    <---------At5g28300        ----------->HVH21        <---------YAB1  < ----------DOF2                <-----------GT1    ================================MADS_MADS     <----   ggttttattggttagtggatttttgtttatattttacagccaaaagtctttgctaaatgttgtgacaccattaaaagctcatttttgtcatagttgatgt  10740900                                                 <---------O2                --------->YAB1                ------>ZmHOX2a(1)              --------->ZAT14              <---------YAB1            --------->ARR14(2)                 <---------ZAT14            <---------------AGL15            <---------ARR14(2)                --------->WRKY18(1) >>>>>>>>>MYB98           <---------CCA1(2)         <---------AHL20(2)     --------->ARR11(3)       <---------YAB1           <---------GLK1(1)     --------->AHL20(2)         <---------ARR11(3)  <---------ICU4       <-----------GT1     <---------TOE2(3) <-----------HVH21  <-----------GT1--------->ICU4  <----- --->TEIL  --------->GLK1(1)     <---------AHL20(2)     ---------->DOF2   =========================== ----------DOF2--------->TOE2(3)<---------AHL20(2)  <---------MYB46(3)    =========================== -----CCA1(2)  --------->TOE1(3)--------->AHL20(2)  ----------->GT1       --------------->AGL15<-----   atctttatttcacatatccttataagtttaagaatttaatttatagcagtcaagtggttaaagattttaacatatactataataagtatgaaaatttggg  10741000                        <---------------AGL15                        --------------->AGL15                       <-----------------AG                       ----------------->AGL1                       ----------------->AGL2                       <-----------------AGL1                       ----------------->AG                       <-----------------AGL3                     <-----------GT1                                                                -              <---------YAB1               ---------->DOF2                                          <            <---------ICU4              --------->TOE2(3)                                           <         --------->YAB1<-----------------AGL2                                                      --        <---------YAB1 ----------------->AGL3 <---------ZAT18                                    ---- ----ANAC58 --------->YAB1         --------->ANAC58                                              <--- ========================================MADS_MADS                   ---------->DOF2             <--- ========================================MADS_MADS  --------->AHL20(1)                     <--------- ----ANAC58--------->ICU4          --------->ANAC58 --------->ARR11(3)       <----------DOF2     ----   ttcgactactctcattatgattttaaccaattttggcaagaacattagagcacatatattgcataattttggaaagtgtctttaaaactaaaattacaaa  10741100  Previous    Next  AGI:  At4g19740.1    Description:  hydrolase, hydrolyzing O-glycosyl compounds. similar to glycosyl hydrolase family 18 protein [Arabidopsis thaliana] (TAIR:AT4G19720.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24272.1); contains InterPro domain Glycoside hydrolase, family 18, catalytic domain; (InterPro:IPR001223); contains InterPro domain Chitinase II; (InterPro:IPR011583); contains InterPro domain Glycoside hydrolase, catalytic core; (InterPro:IPR013781) Range:  from: 10739577    to: 10740630    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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