Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       ------>ZmHOX2a(1)                                                                                     ----------->HVH21                                                                                   ----------->RAV1(2)           ----------->GT1                                      --------->TOE2(3)  ==================           --------->At4g35610                                 ----------->RAV1(2) --------->At4g35610  ------>MYB83                <---------GLK1(2)               ------->TEIL     <-----------ARR10  ------>MYB46(1)      <---------At4g35610               --------->At4g35610   <---------ARR14(2)  -- -------->AtMYB61      --------->At4g35610               <---------At4g35610   --------->ARR14(2)---- -------ARR11(3)      --------->MYB59                    ----------->RAV1(2)  <---------CCA1(2)------   gaccatccataagagctaaatagttagctacagactcttcgacataaaaatccaacttcttctgaacctgaatcaactccaaatctcctgacctctccaa  10701100                                                                                                   <-            --------->LBD16                                                                   =======           --------->HSFB2a(2)        <----------DOF2                                         <------ZmHOX2a(2)           <---------HSFB2a(2)--------->ARR14(2)                                              ======= ======RAV<---------LBD16     <---------ARR14(2)                                      <---------ICU4 ------->ANAC46               <-----------ARR10                      --------->YAB1   --------->YAB1 ----->ANAC46--------->LBD16 <---------CCA1(2)              ---------->DOF2   --------->ZAT14-------- ----->RAV1(1) <---------KAN4(2)    ------>ZmHOX2a(1)    <----------DOF2--------->MYB52(1)   <-------   cacaacaccaattcccgaataaccagaacccaaatctcctctttcgaatatcgagactcctttaaagaccatcttaacagagaactcatcatcaagatca  10701200         ------>ZmHOX2a(1)     <-----------GT1              <---------ICU4   <-----------GT1  --------->TOE2(3) ---------DOF2      <----------DOF2       <----------DOF2 ===============HOX2a_HOX2a       --------->ZAT6     --------->ARR11(3) ==================HOX2a_HOX2a --------->YAB1        <---------ARR11(3)                        ------ ->ARR11(3)     --------->REM1(1)<---------YAB1  ---------->DOF2--------->AtMYB61         <---------At4g35610 --ARR11(3) ------>ZmHOX2a(1)<---------ARR11(3)--------->MYB46(3)    --------->MYB46(3)------>ZmHOX2a(1)   tcttttttctcctcctctacaactttagctatatcatcactaccctttaaccaaagttcttcatcaccacaacaacttctaaactcttcctcatctccta  10701300                                              --------------->AGL15                                              <---------AtLEC2                                              <---------------AGL15                            --------->ANAC58 ========================================================                        --------->YAB1       ----------------->AG------>MYB46(1)                 ------>ZmHOX2a(1)           ----------------->AGL1                 <-------TEIL            --------->At4g35610              <-----------------AGL1               <----------ID1            <---------HSFC1(2)             <-----------GT1       ------>MYB83    ----------->GT1            <---------HSFB2a(1)    ------>ZmHOX2a(1)      <---------MYB52(2)    <---------------AtSPL8            <---------At4g35610--------->ARR14(2)    ----------->GT1            --------->DAG2-------            --------->HSFC1(2) --------->GLK1(2)    <---------HSFB2a(2)         --------------->AtSPL8            --------->HSFB2a(1)<---------ARR14(2)   --------->HSFB2a(2)        --------->DAG2 <------ >ZmHOX2a(1)<---------ZAT2  --------->ANAC58 ----------------->AGL2           ---------->DOF2--------   agtgattcaatggaagctcctcacattcacaagaatcctcttgattttccatgtctggaaacaaacctatctaaactacaaaaaggtacaaactttctta  10701400                               ------>ZmHOX2a(2)                              --------->At4g35610        --------->ANAC58      <------ZmHOX2a(2)        --------->ANAC58     --------->ARR14(2)        --------->ANAC46     <---------ARR14(2)       ------->GAMYB         <---------AGP1                                                         -      <---------ALFIN1      <---------CCA1(2)                                            --------->ARR11(3)    ----------->RAV1(1)     <---------ARR14(1)                                          <---------GLK1(1) =========MADS_MADS     --------->ARR14(2)                    *TSS     --------->DAG2  --------->ARR11(3) -------->AGL15         <---------ARR14(2)                  <---------AHL20(2)         <---------ARR11(3) ---------AGL15        <---------CCA1(2)                   --------->YAB1        <----------DOF2   -- ->TOE2(3)    <---------ATHB12--------->GLK1(1)    --------->MYB52(1) ---------->DOF2 <<<<<<<<<RAP2.2   acttagcaacacaccaatgaaacccatatcggatctgcaaatttcatgaaacaaaaccgaataaaaatgagataaagctaattcttttagatatcatcta  10701500             --------->ARR14(2)             <---------ARR14(2)       <-----------GT1                     --------->AHL20(2)               <---------At4g35610     --------->YAB1                <----------ID1                <------ZmHOX2a(2)    <---------ATHB51             <---------------AtSPL8 <---------AtLEC2    --------->At4g35610<----- ----------->CBF              ---------->DOF2       <----------DOF2     --------->MYB52(1)    <------ ------->TOE2(3)             <------ZmHOX2a(1)    ------->TEIL  --------->AGP1            -----------   atctcaattataccatatactgagagagagaggaaagggaacaaaaaaaatgaactttgcattacagatcaacaaaacagctaagcttgatgaagttaca  10701600                                                                                           --------->MYB52(1)                                                                                           ------>MYB46(1)                                                                                           -------->P                                                                                         --------->MYB46(3)                                                                                         <---------MYB111(1)                                                                                         <---------MYB55(2)                                                                                         --------->DEAR3(1)                                                                                         <---------MYB111(2)                                                                                 --------->ANAC46                                                                                ------>MYB83                                       --------->ZAT18                      --------->PCF2 ------>MYB83                                       <---------ZAT14                     <---------WRKY18(1)                                   <---------------AtSPL8                 --------->WRKY12--------->MYB55(1)                                  ---------->DOF2                         --------->WRKY38(1)    --------->ARR14(2)      --------->ATHB12                   <---------At4g35610       --------->AtMYB61    <---------ARR14(2)   ------>MYB83  --------->ZAT14         <---------ZAT2   ------>MYB46(1) ----- ----ANAC55(2)           ------>MYB46(1)  --------->ANAC46     --------->ZAT2 --------->MYB46(3)<---- -TEIL  --------->At4g35610<---------ATHB12                    --------->At4g35610 --------->ZAT14 >GT1<------ZmHOX2a(2) <---------MYB59 <-------TEIL   ---------->DOF2  <---------MYB46(3)<---------MYB46(2)   taaacagatcagcataaatcagagaccaaatcatttgaaagtacacagaagataacaaaagaagcagctcgatttgttgacccactaaacaccaaccaga  10701700          <---------ANAC55(2)          --------->ANAC55(2)        <-----------GT1     -------->ATHB1                                    --------->GLK1(1)     <--------HAHB4                         <---------AHL20(2)                                    <--     --------->YAB1                     --------->AHL20(2)                                       ----     <---------ICU4                     <---------AHL20(2)         --------->GLK1(2)            <----     --------->ATHB51                  --------->AHL20(1)         <---------ARR11(3)   <---------MYB46(3)    <---------ATHB12        --------->AHL20(2)         <---------GLK1(1)    <---------AHL20(2)  -----    --------->ICU4 --------->ANAC58    <---------AHL20(1)         <---------GLK1(2)   ------>ZmHOX2a(2)    <---------ATHB51   ----------->GT1 --------->AHL20(2)         --------->ARR11(3)<---------ARR14(2) ---->ARR14(2)     --------->ANAC46    <---------AHL20(2)        <---------RVE1(1)  --------->ARR14(2) -----ARR14(2)     --------->ANAC58<---------YAB1 --------->At4g35610 ----------->GT1<------ZmHOX2a(2)   ccctcaattattacatatttcaaggaagaaaaaaattctaatttatttaagtagcagaaatcaccagagattttgtaataaaacgagatcggttgaaatt  10701800                                   <---------ANAC58         --------->ANAC58          <---------ANAC58         --------->ANAC58       <----------DOF2    <--------HAHB4            --------->HSFC1(2)    --------->YAB1            <---------HSFC1(2)   <---------YAB1           <---------GLK1(2) -------TOE2(3)          <---------HSFB2a(2) ------>DOF2             --------->HSFB2a(2)             --------->ZAT6                            <- -----AHL20(2)       --------->GLK1(1)                 <-----------GT1                          ----- ---->AHL20(2)       <---------GLK1(1)-------->P <------ZmHOX2a(1)                             <-----   aaagtatcattaagcaagaacagaaatccagaagctttcttaccagtggaaggagatttacacttggaaactaaaattaagaagaaaactctaagctata  10701900                          --------->HSFB2a(2)            --------->RVE1(1)           <---------ARR11(3)          --------->AHL20(2)           --------->ARR11(3)      ---------->DOF2  <---------ARR11(3)      <---------LBD16                     <---------HSFC1(2)  --------->ARR11(3)      <---------HSFB2a(2)  --------->ANAC46                                    >> ----------GT1    <---------MYB52(1) ----------->GT1          --------->HSFC1(2)                >>>>> ---->YAB1 --------->GLK1(2) <------ZmHOX2a(1) --------->ANAC58                              >>>>>>>> ----YAB1 <---------GLK1(2)--------->LBD16     --------->ANAC58                           >>>>>>>>>TBF1   ataacatcttcaaaatctctgtttttttccaggaaaaaaaagaaaataaacgcattgttttggatgtttctactgagtttttgtggagagaagaagaaga  10702000  Previous    Next  AGI:  At4g19670.1    Description:  zinc finger (C3HC4-type RING finger) family protein. similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT5G60250.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44439.1); contains InterPro domain Zinc finger, C6HC-type; (InterPro:IPR002867); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 10699248    to: 10701462    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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