Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                      <---------ALFIN1                   <---------ZAT14                   --------->ZAT14    --------->TOE2(3)    --------->TOE1(2)    --------->TOE2(2) --ZmHOX2a(2)   --------->At4g35610                                                      -------->P --->ARR11(3)  --------->ANAC58                --------->DAG2                       <-----------ARR10 ----ARR11(3)  --------->ANAC58               ---------->DOF2                  --------->ANAC58 >SPL7         --------->ANAC46          ----------->GT1         --------->YAB1--------->ANAC58    --   catatacctaagaacataagctacactgtttaaaaacagaatgcagaaaaaagtgaagtttctgcaattgtaagtgaagagaagcaaaacttaccaattt  10691200                                                    <---------AHL20(2)                                                   --------->AHL20(2)                                            ------>ZmHOX2a(2)                                           <---------GLK1(1)                                           <---------At4g35610                                          --------->ARR14(2)                                          <---------AGP1                                          <---------ARR14(2)                                       --                                          <---------ARR11(3)                                     <---                                          ------->TEIL    <---------ZAT6             --------->MYB59        --------->GLK1(2)                 --------->ARR11(3)                  <---------WOX13(1) ----       <---------GLK1(2)   --------->ARR14(2)      <---------ATHB12  --------->ARR14(2)   ----------- -------->DOF2             <---------ARR14(2)    <XXXXXXXXXXXXXXXXXXXXMIR867  <----------DOF2--------   gcaaagacagattccaacaagaacagaagtatatggaagaaatggatctgctaataaatagtgttcaacaaaatactctgcttgattttggtaagatttg  10691300                                                                                                   <-                                                                                                 ----                                                                                                 ----                                                                                                 <---                                                                                                 <---                                                                                                <----                                                                                                -----                                                                                              -------                                                                                              <------ ---->ZmHOX2a(2)                                                                      <----------DOF2 ------ARR11(3)                                                             --------->ZAT14  <------- ----->ARR11(3)                          ----------->GT1<<<<<<<<<TBF1   <-----------GT1    --------->YAB1 >ARR10                        <----------DOF2   --------->ZAT6         <---------ICU4<---------DAG2 ->CCA1(2)               <---------ARR11(3)    <-----------GT1         <---------ATHB12   <---------YAB1   atctccatgactgtctctagttctcaatttcttctttggtgaatggttttaactcttcttcttctacagactaatcacttctctcaagctttatcatcat  10691400 --------YAB1 ----->ATHB12 ----->YAB1 ------ICU4 -----HAHB4 -----YAB1                                                        --------->YAB1 ---->ICU4                     --------->ANAC58                 <---------TOE2(3) -->YAB1                 ---------->DOF2                  <----------DOF2                        ---- ---ICU4          ---------->DOF2                    --------->DAG2                ----------->GT1 --YAB1       ---------->DOF2  --------->ANAC58     ---------->DOF2                <---------ANAC46   cattactgaaatatagaaaagaaagagcaaagtaagaaacttcatttctgaacaaaaagtcttttcaaggattatacaaatggttttgtgaattacatca  10691500                                               --------->GLK1(2)            <-----------ARR10       --------->ARR11(3)            --------->GLK1(2)       <---------ARR14(2)                                    --------->YAB1            <---------ARR11(3)      --------->ARR14(2)                                  ------------>CBF            --------->ARR11(3)      <---------ARR11(3)                              ----------->GT1     --------->TOE2(3)            ----------->ARR10     <-----------GT1      ------------>CBF ----->At4g35610        --------->ANAC46  ---------->DOF2   *TSS           --------->GLK1(2)   gaagaaaccacaaaaatcttcgttatacccaagaagaagatactaaaagactctgtttttatcgtttgatcagagaaaatccaattttgtaacaataagt  10691600                                                  --------->LBD16                                            ----------->HVH21                                           <-------MYC3                                           ------->MYC3                                           <-------MYC2                                           ------->MYC2                                          <---------TGA1a                                          --------->O2                                          --------->ANAC46                                          <---------O2                                          --------->ANAC55(2)                                          ======================bZIP_DOF                                          <---------ANAC55(2)                                          --------->TGA1a                                          ======================bZIP_DOF                                        <---------ALFIN1                                     --------->YAB1                                    <---------ATHB12                  --------->ANAC58                                   --------->ANAC58         <---------At4g35610                 ===================================bZIP_DOF--------->At4g35610                 ---------->DOF2   --------->ANAC58    --------->DAG2 --------->ANAC58           <----------ID1         --------->WOX13(1) ---------->DOF2  --------->ANAC46   =================================================bZIP_DOF<---------ZAT14   --------->TOE1(3)           --------->ANAC58  --------->ANAC58  --------->ARR14(2)   --------->TOE2(3)           --------->ANAC58------->TEIL <------NtERF2---------->DOF2       <-----   <----------DOF2--------->DAG2------------>CBF --------->ANAC58  <---------ARR14(2)    <------ZmHOX2a(1)   ttaaactttaaaacggacaaaaagtagagacagaagcaatcaacacgtgaaccgcaaaaggctgcagaagaaacgcaaagaagatgaagaaggagaagga  10691700                                                                                                   --                                                                ---------->DOF2                ------                     ----------->GT1                <---------HSFB2a(2)                --------->ANAC46              <---------YAB1        <----------DOF2 --------->HSFB2a(2)                --------->ANAC58           --------->ICU4   --------->DAG2          <---------HSFC1(1)                 --------->ANAC58 -ZmHOX2a(1)--------->YAB1 ---------->DOF2          --------->HSFC1(1)            <-----------GT1  --   cgttacagagacgattatgagagaagaaaaaaagggttctttcttcagagacttcgagaaattatccaaagttaagagagttttttaccaagtaacttga  10691800                     --------->AHL20(2)                     <---------AHL20(2)                 --------->ICU4          <---------ZAT18          --------->ZAT14          <---------ZAT14                                 <---------KAN4(1)          --------->ZAT18                                 --------->KAN4(1)         --------->ALFIN1   <---------------------WRI1   <---------KAN4(2)               --------->ARR11(3) ------->ANAC58--------->YAB1          ---------->DOF2  --------->YAB1                   <---------ARR11(3) ---->DOF2<-------TEIL    <----------ID1          --------->TOE2(3)                     --------->YAB1 ------->ANAC58----------->GT1      -------->P    --------->YAB1                     ---------->DOF2   agcgcaagagggtgcagtagtaattaaaaaaacaaaactaccaaagtagttatcttaagaataatcgagagagaagacaactattgacaaagataattca  10691900                     ----------->GT1                    <---------YAB1                  <---------GLK1(1)                  --------->CCA1(2)                  --------->GLK1(1)                 <------ZmHOX2a(1)                     <---------GLK1(2)                 <---------ARR14(2)                ----------->GT1                        --------->ARR14(2)                 --------->ARR14(2)      --------->AHL20(2)                               <---------ARR14(2)                <------ZmHOX2a(1)      <---------ANAC55(2)                             <---------TOE2(3)              <---------TOE2(3)        ----------->GT1   ---------->DOF2         --------->AHL20(2)              <---------TOE1(3)        --------->ANAC55(2)      --------->At4g35610 <---------ATHB51          <----------DOF2   ----------->GT1 --------->ICU4      <---------At4g35610 <---------AHL20(2)   gtttgggttttgttttaaggatatgcttaatagttaataacatgtaattagggaggaaacaaaggaagcagaaaatggttgtataaattatggattctga  10692000                                                                   <---------ARR11(3)                                                        <---------YAB1                     <---------ATHB12                                                      --------->YAB1                     ------>MYB83                            <------ZmHOX2a(1)         <---------ICU4                     ------>MYB46(1)                        --------->ZAT18              <---------ATHB51     <---------AHL20(2)---------                        <---------ZAT14         --------->TOE2(3) <---------CCA1(2)    <---------MYB111(1)                       --------->ALFIN1        ----------->GT1   <---------AHL20(2) <----------ID1                      <---------ZAT14       --------->ARR14(2) <---------YAB1     --------->ANAC58                      --------->ZAT18       --------->GLK1(2) --------->AHL20(2)  --------->ANAC58                     --------->ALFIN1       <---------ARR14(2)--------->AHL20(1)---------->DOF2            <---------AHL20(2)      --------->MYB52(1)-------->HAHB4  <----------DOF2 --------->ANAC58            --------->AHL20(2)    --------->TOE2(2)  --------->ICU4--------->ARR11(3) --------->ANAC58   ccttgttagacgatttaaatcgagtgtgcaggaaaacctaagggagaatatgttaattatgaaatattatatcttttatattgaaagcaccaaatcatct  10692100  Previous    Next  AGI:  At4g19645.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G31300.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G31300.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70221.1); contains InterPro domain TRAM, LAG1 and CLN8 homology; (InterPro:IPR006634); contains InterPro domain Protein of unknown function DUF887, TLC-like (InterPro:IPR010283) Range:  from: 10689856    to: 10691560    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g19650.1    Description:  similar to mitochondrial transcription termination factor-related / mTERF-related [Arabidopsis thaliana] (TAIR:AT5G45113.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44451.1); contains InterPro domain Mitochodrial transcription termination factor-related (InterPro:IPR003690) Range:  from: 10691684    to: 10695711    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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