Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     --                                                                                                   <-                                                                                           ----------                                                                                          <---------TOE2(3)                                                                                       <---------YAB1                                                                                    <---------------AGL15                                                              --------->REM1(2)     --------------->AGL15      --------->YAB1                                   <---------ABI4(2)           ----------------->AGL2     <---------ATHB12                      <---------ALFIN1<---------ANAC46        ----------------->AGL3 --->ANAC46                            <---------ATHB12--------->MYB46(3)          <-----------------AG -ZAT14                   --------->MYB52(1)          --------->ANAC46             ----------------->AG >ZAT14      --------->ANAC58        ------>MYB46(1)  --------->ANAC58             <-----------------AGL3 >ZAT18      --------->ANAC58        ------>MYB83     --------->ANAC58        ---------->DOF2      --   gaaacaaatcaaaataagcaaaaaaaaaaaacagaaaccaaatcaacactgtttgcaagcaccgtgttcagataaatccctaaaaccctattatggaaaa  10689200                                                                     --------->YAB1                                                                   ------->TEIL                                              <---------ARR11(3)--------->ANAC58                                  --------->ARR14(2)            --------->ANAC58     --------->YAB1               --------->GLK1(2)             --------->ANAC55(1) ------->TOE2(3)                  <---------ARR11(3)            --------->ANAC55(2) --------MYB59                    <-----------ARR10             --------->ANAC46 ->GT1                --------->TOE2(3)       --------->ARR11(3)<---------ANAC55(2)                -- ------->TOE1(3)      --------->TOE1(3)   ---------->DOF2  <---------ICU4<---------GLK1(2)         <-   acctaaatcaaaatcgaacataaaccctaacaacaaaatctgatcaaagctctccaattcaacatcacgtatcaaaattctccaaattagaaacagaatc  10689300                                                                              ------->GAMYB               --------->ARR11(3)                                             --------->AtMYB61               <---------ARR11(3)                                            <---------MYB55(2)               --------->GLK1(2)                                            -------->P          ----------->GT1                                                   ------>MYB83   --------->LBD16                                        --------->At4g35610--------->MYB46(3)  --------->HSFB2a(2)                    --------->WOX13(1)                 ------>MYB46(1)  <---------HSFB2a(2)        <---------ARR14(2)        <------ZmHOX2a(2)  --------->AtMYB61      ---- ------->ARR14(2)            --------->ARR14(2)   <-----------GT1        --------->MYB46(3) --------- --------ARR14(2)       --------->MYB52(1) <---------ATHB12       <----------ID1       --------->GLK1(1)   aaatccagaaaactgaaaatctaacaaaacgggtctgcaaattcaatcaattttacgatcatcggagagagacaaaccaaccacaagggaactcaaaaga  10689400                                                   ------>NtERF2                                                   <---------RAP2.6(3)                             <---------DOF5.7(2)<---------At4g35610                             ---------->DOF2 --------->At4g35610                           --------->DOF5.7(2)  --------->At4g35610                          <----------DOF2    --------->ZAT2                            <---------ARR14(2)                         <---------ANAC46    <---------ZAT2                 --------->GLK1(2)  <---------At4g35610    <---------ANAC58    ----------->RAV1(2)   ------>ZmHOX2a(2)   --------->ARR14(2) ----->GLK1(2)           <---------ANAC58    <---------At4g35610 <---------AGP1  <---------TOE1(2) ->DOF2                 ---------->ID1  <-----------GT1   <---------GLK1(2)<---------GLK1(2)   ------   atcgagctaataagactgaccaatttggcgttaatgctcttgtttccagctgcagccatggattatcgatctgaagagaatcgcaggtcgatacgataat  10689500                                                                                                    -                                                                                              ------>MYB46(1)                                                         --------->AHL20(2)                   ------>MYB83                                                         --------->AHL20(1)               --------->ANAC58                                                         <---------AHL20(2)             --------->MYB46(3)                                                 ----------->GT1                     --------->MYB46(3)                          ---------->DOF2       ----------->GT1        --------->ARR14(2) --------->ANAC58                       <------ZmHOX2a(2)       <---------TOE2(3)       <---------ARR14(2)------->GAMYB  <---------At4g35610 --------->ARR11(3)       --------->DAG2      --------->At4g35610  <---------MYB55(2)  --------->At4g35610 <---------ARR11(3)     ---------->DOF2       <---------At4g35610  <---------MYB111(2) --->GLK1(2) <---------TOE2(3)  --------->MYB52(1)      --------->AHL20(2)    <------NtERF2--------->MYB46(3)   cttcagctcaaaactgagattgaagatcaaaagacgacggagacacaaaaaggttaaaaaaaattagtgagcggaaacgcgtcgtcaacaacaaccaatc  10689600                            --------->HSFB2a(2)                            <---------HSFB2a(2)                            <---------HSFC1(1)              <-----------RAV1(1)                                     --------->ANAC58             <---------TOE2(3)                                        ----------->GT1           <---------AHL20(2)                                         --------->ANAC58           --------->AHL20(2)    <---------MYB52(2)              --------->ANAC46  --------->ANAC58 <          <---------ATHB12  --------->HSFC1(1)                   --------->ANAC58  --------->ANAC58 <      ------>ZmHOX2a(1)    *TSS<<<<<<<ZML2                   <-----------GT1  ----------->HVH21    --     --------->TOE2(3)  <----------DOF2         --------->ANAC46 --------->ANAC58  --------->ANAC46--   ------>ZmHOX2a(1)<----------DOF2             --------->ANAC58 --------->ANAC55(1)       --------->TOE2(2)  <---------ALFIN1 <---------ANAC58             --------->ANAC58<---------LBD16    ----------->GT1 <- ----->ZmHOX2a(1)  <---------ANAC58--------->MYB52(1)     <---------ICU4--------->AHL20(2) --------->TOE1(2)   tcctcctcctcaattaatgttgctttctttctagaactaacaaaaaatacaagtaaacaaatattacacggcaagttaatatgacacgaaaaaactacga  10689700           ------------>CBF          >>>>>>>>>>>>>>>>>LFY       --------->WRKY38(1)       --------->WRKY12                                       <---------ANAC46      <---------MYB52(1)                                      <---------ANAC58    --------->ATHB12                                          <---------ANAC58 ---------AHL20(2)                                           --------------->AtSPL3 ---------YAB1                                           --------->ATHB12                          <- ------->AHL20(1)                                --------->ZAT18                                   <- ------->AHL20(2)                  <----------DOF2 ------>ZmHOX2a(1)                <---------At4g35610 --------AHL20(1)       --------->MYB59       XXXXXXXXXXXXXXXXXXXX>MIR776   --------->ANAC55(2)   <--   atataatcgttggcccaatgtagatttaggcccaagtctttttgggttaagtcctctattgatttcgtacatggatttaagtattcagcatgcataggga  10689800                                                                               <---------ANAC58                                                                               <---------ANAC58                                                                            ---------->ID1                                                                          <-----------RAV1(1)                                                                        <----------DOF2                                   --------->ICU4                    <-----------ARR10         --------->ICU4            <---------YAB1                    --------->ARR14(2)         <---------ATHB51        <---------ICU4                      <---------ARR14(2)        <---------KAN4(2)       --------->ICU4                       <---------ARR11(1)   <---------ANAC46             <---------YAB1                       --------->ARR11(3) <---------ANAC46             --------->YAB1                         <---------ARR11(3) --------ZAT14         --------->GLK1(2)                     <---------MYB52(2)<---------ANAC46 ------GAMYB          <---------ARR11(3)          ---------->DOF2   <---------ARR14(1)          ----- ---------RAV1(1)     --------->ARR11(3)      --------->At4g35610   <---------CCA1(2)          <-----   ctgttgtgggaataatgggaatgagattttgaacataattagtgtataagctaaaagttagaaacaaaccatatctttgttgcttataaacttgtaagat  10689900                                                                                                -----                                                                                                -----                                                                                              <------                                               <---------ZAT14                                <------                                               --------->ZAT14                             <--------- ---->GLK1(2)                     --------->ANAC46     <----------DOF2                 <---------ARR11(3) ----GLK1(2)      <---------AHL20(2)      <----------DOF2                         --------->ZAT14   tcttcataagagttttatatttacataaaaaaaaaaacacaactctttcttcactgtcttttctcaagagttttcttcaatcccttcactatcttaccaa  10690000                                                                              ------>MYB83                                                                              ------>MYB46(1)                                                                            <---------MYB55(2)   <------ZmHOX2a(2)            --------->SPL7                              --------->MYB46(3)  --------->AGP1            --------------->AtSPL8                         --------->At4g35610 ->MYB83                    --------------->AtSPL3                         --------->ZAT2 ->MYB46(1)      --------->ANAC46                                ------->TEIL--------->MYB55(1) ---MYB46(2)     --------->ANAC58 ----------->RAV1(1) ------->GAMYB        <---------At4g35610 ---MYB59        --------->ANAC58--------->REM1(1) --------->MYB52(1)  <-----------HVH21     -------- --GT1   <-------TEIL <---------ATHB12   --------->MYB52(1)  ------->TEIL  ----------->RAV1(2)  -----   accagatcaagttcatgacactcaatgaaatcggtacaacaaataccagtagataaccgaatgtatgcatctctatcacctgccgaaaaatccattgatc  10690100  Previous    Next  AGI:  At4g19640.1    Description:  ARA7; GTP binding. similar to RHA1 [Arabidopsis thaliana] (TAIR:AT5G45130.1); similar to ras-related GTP-binding protein [Nicotiana tabacum] (GB:CAA50609.1); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras (InterPro:IPR013753); contains InterPro domain Small GTP-binding protein; (InterPro:IPR005225); contains InterPro domain Ras small GTPase, Rab type; (InterPro:IPR003579); contains InterPro domain Rab5-related (InterPro:IPR015599) Range:  from: 10687208    to: 10689627    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g19645.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G31300.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G31300.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70221.1); contains InterPro domain TRAM, LAG1 and CLN8 homology; (InterPro:IPR006634); contains InterPro domain Protein of unknown function DUF887, TLC-like (InterPro:IPR010283) Range:  from: 10689856    to: 10691560    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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