Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                         <---------AHL20(2)                                                  <---------DAG2                                  --------->AHL20(2)  --------->AHL20(2)                       <-----                         ----------->GT1          <----------DOF2                     --------->YAB1                         --------->YAB1     --------->ZAT6                            ----------->GT1                     --------->AHL20(2)   <-----------GT1                         <---------AHL20(2)                     <---------AHL20(2) <---------AHL20(2)  <---------AHL20(2)    --------->AHL20(2) >YAB1       <-----------GT1      <---------AHL20(2)  <---------AHL20(2)<---------AHL20(2)     ------   actcaatccgatattaaacccgtttaattgtaaaatttaaattttaacaatactttttaaatttaaactgatatttagttttgtttaattgtaaaattta  10625400                            --------->AHL20(2)                            --------->YAB1                           <---------YAB1                 <---------AHL20(2)       <---------YAB1   <---------AHL20(2)          <----------DOF2              --------->AHL20(2)     --------->YAB1     --------->AHL20(2)       <-----------GT1                 <---------AHL20(2) -   <---------MYB52(1)  --------->AHL20(2)       <---------AHL20(2)           ------>ZmHOX2a(1)      - ----AHL20(2)   <------ZmHOX2a(2)          <---------MYB52(1)     <---------AHL20(2)        <-------- --->AHL20(2)  --------->AGP1 <---------YAB1<---------RVE1(1) --------->YAB1--------->TOE2(3)   -----   aatccgtttataattcagatcgatatttaattataaatctaaaccgatatttaactttgtttaatcatataatctaatcctaaaaaattcttatataaac  10625500                                                                                 <---------WOX13(1)                                                                                <------------CBF                                                                               --------->ATHB12                                         --------->YAB1                     <---------ICU4      <---------AHL20(1)     <---------ANAC46                               --------->YAB1      <---------ARR11(3)     ----------->GT1                               --------->ICU4      --------->AHL20(1)   --------->ZAT18         ------->TEIL       <---------ZAT2 ------------>CBF          --------->ZAT14   <---------AHL20(2)       --------->At4g35610 --------->MYB46(3)        <---------ZAT14  --------->AHL20(2)        <---------At4g35610 -------->ANAC58           <---------ZAT18  <---------AHL20(2)    --------->STY1(2) -------->ANAC58    <---------YAB1      <---------YAB1            <---------STY1(2)----------->GT1 -AHL20(2)     <---------ANAC58         <---------AHL20(2)  <---------AHL20(2)--------->ICU4      --- ---->ANAC46   <---------ANAC58      <---------AHL20(2)     --------->AHL20(2)<---------YAB1  -------   tcaaccaatatatcatttcgttttgatagtggagtatattttataattaaatgaattttagttttattagctagctgattatgattggctaaaatagaaa  10625600                                                                                 <---------ARR11(3)                 ----------->GT1                                       <---------ARR14(2)     ----------->GT1<-------TEIL                                       --------->ARR14(2) <---------ZAT14 <---------HSFB2a(1)                            --------->ARR14(2)       <---------YAB1 ---------->DOF2 <---------HSFC1(2)                          ------>ZmHOX2a(1)  <---------CCA1(2) --- -------->GT1    --------->HSFC1(2)     <-----------GT1     <---------LBD16   <----------DOF2     <-- --->DOF2   --------->YAB1    <<<<<<<<<MYB2    <----------DOF2  <---------ARR14(2)  <----------DOF2   gagtaaagagtgaataagaaggttcatttttggttttcaaattatccatctttattttttgtcctggatactggataggcctttatctttcattcttggg  10625700                                               --------->KAN4(2)                                               <---------ARR14(2)                                               --------->ARR14(2)                                              <----------TaMYB80                                              <---------KAN4(1)                                              --------->HSFB2a(1)                                              <---------HSFB2a(1)                                   -                                              --------->KAN4(1)                                     -                                             <---------KAN4(2)                                      <                    --------->AHL20(2)       <---------ARR14(2)                                     <                    <---------AHL20(2)       --------->ARR14(2)                                     <                   <---------AHL20(1)        ---------->TaMYB80   <---------ANAC58                  <                   --------->AHL20(2)     <---------TOE2(3)       <---------ANAC58                  -            --------->ZAT6       <---------GLK1(1)  <---------CCA1(2)  ------------>CBF             <     <---------CCA1(2)           --------->GLK1(1)  <------------------------ANAC81    <---------ARR14(2) ------>ARR14(2)   --------->AHL20(1)    --------->YAB1        <----------DOF2         --------->ARR14(2) -------ARR14(2)   <---------AHL20(2) <------------CBF     <----------DOF2            <----------TaMYB80   gtttcgcatctcttccactaatttatttgagatggaattccattgagaatattcgtctcttctttctttcgttctcaattcccatcccatattccccatg  10625800                        --------->CCA1(2)                        --------->ARR14(1)                 --------->ATERF1(1)                 <---------LBD16                <---------At4g35610                <---------ZAT2                --------->At4g35610                --------->ZAT2                <------NtERF2              --------->ATERF1(1)             <---------At4g35610             --------->At4g35610             --------->ATERF1(1)            <---------RAP2.3(1)           <---------RAP2.3(2)           <---------RAP2.6(2)                                                 <-----------ARR10          <---------LBD16<-------TEIL                                          ------->TEIL         <-----------RAV1(1)                                                   <---------ARR14(2)         =================RAV        --------->LBD16                           --------->ARR14(2)     <----------DOF2   --------->ARR14(2)                    <------NtERF2    <---------CCA1(2) <---------GLK1(2)     --------->ARR11(1)            <-------TEIL<-----------HVH21 -------->HSFB2a(1)    <---------ARR14(2)        --------->DAG2 --------->ANAC58 -------->At4g35610   --------->GLK1(1)          --------->MYB59--------->ANAC58 ---------ZAT2<-----------RAV1(2)   --------->HSFB2a(2)      --------->LBD16--------->ANAC58        < ------NtERF2<------NtERF2<---------TOE1(1)      <---------TOE2(3)  --------->KAN4(2)           <---- ---------At4g35610   <---------GLK1(1) --------->ZAT2       <---------At4g35610                <---- ---------HSFB2a(1)  ----------->ARR10  <---------ZAT2     <---------LBD16  --------->ANAC58   ------ -------->HSFC1(2)  <------NtERF2   <---------HSFB2a(2) <---------GLK1(1)------>ZmHOX2a(1)  --------- ---------HSFC1(2) --------->LBD16 <---------LBD16  <--------P<-----------RAV1(2)           ---------   gcagcttctttttgcggcagccggagatacgatgttttcccgagcttcagtaaggtagatgtccgcaggtcattcctcgcgcatcttctcaaggagctcg  10625900                                                                                           ------>ZmHOX2a(2)                                                                                          --------->GLK1(1)                                                                                          <------ZmHOX2a(2)                                                                                         <---------ARR11(3)                                                                                         --------->ARR11(3)                                                                                         --------->ARR14(2)                                                                                         --------->GLK1(2)                                                                                         <---------ARR14(2)          <---------ICU4                                                                 <-----------ARR10         <---------ATHB12                                                                <---------AGP1 ---------At4g35610                                     --------->At4g35610             <------ZmHOX2a(1) -----WRKY18(1)                          <---------ARR14(2)                       --------->GLK1(2) -----ALFIN1            <---------ARR11(3)         <---------ATHB12              <---------ARR14(2) --->ETT(2)             --------->ARR11(3)    ------>MYB83                       <---------GLK1(2) >At4g35610       <-------TEIL           --------->ARR14(2)                  --------->At4g35610 ---- >ZAT2 --------->WOX13(1)<------ZmHOX2a(2)    ------>MYB46(1)  <----------DOF2   --------->ARR14(2)   accgcagattaatcaatacgttcacagatcatggtatggagagaaacctcccaatcgacgctgaacttttatcggcgatagcagaatcgaggatctcaat  10626000                                                               <-------MYC4                                                               ------->MYC2                                                               ------->MYC4                                                               <-------MYC2                                                               ------->MYC3                                                               <-------MYC3                                                              --------->TGA1a                                        --------->At4g35610   --------->O2                               --------->ALFIN1               <---------O2                              <-------MYC2                    <---------TGA1a                              ------->MYC2                    --------->ANAC55(2)                              <-------MYC3                    <---------ANAC55(2)                              ------->PIF5                  <---------ALFIN1                              <-------PIF5                <---------ALFIN1                              ------->MYC3              --------->CCA1(2)                              ------->MYC4              <------ZmHOX2a(2)                              <-------MYC4              ========================HOX2a_HOX2a                             --------->TGA1a           --------->ARR14(2)                             <---------TGA1a           <---------ARR11(3)                             --------->ANAC46          <---------ARR14(2)                             --------->PIF3(3)         --------->ARR11(3)                        <---                             <---------PIF3(3)         --------->AGP1                           -----                             <---------O2        <---------ANAC58                             <------                             --------->O2        <---------ANAC58        <------ZmHOX2a(1)  ---------  <---------At4g35610      <---------ALFIN1     <---------MYB46(3)     <---------TOE2(3)    <-------- ----->YAB1       <---------YAB1   <---------MYB46(3)----------->ARR10 --------->ANAC46   <---------MYB46(3)   agtcatcttctctaaaaactatgcttcttccacgtggtgcttagatgaattggttgagatccacacgtgttataaggaattggctcaaatagtggttccg  10626100       --------------->AtSPL8       --------------->AtSPL3       <---------------AtSPL8                       <---------TOE2(3)       <---------TOE1(3)                        <------MYB46(1)       <---------TOE2(3)                        <------MYB83      <---------DOF5.7(2)                      --------->MYB59    --------->DOF5.7(2)        --------->MYB52(1)   <---------TOE1(3)     <---------TOE2(3)   <----------DOF2      ----------->GT1     --------->ARR14(2)          ---------->DOF2 ------MYB52(1)        ----------->GT1      <---------ARR14(2)       --------->ANAC58   --------->ARR14(2) ---->LBD16           <---------TOE1(2)     --------->GLK1(2)        --------->ANAC58   --------->GLK1(2) ---LBD16        ------>ZmHOX2a(1)  --------->MYB52(1)               --------->AtLEC2   <---------ARR14(2) >ARR14(2) ------->TEIL--------->ANAC58----------->GT1            <-----------------------TaNAC69(2) -ARR14(2) <-------TEIL--------->ANAC58--------->LBD16        ---------->DOF2          <---------GLK1(2)   gttttctttaacgtacatccttcgcaagttaaaaaacagaccggagaatttggtaaggtttttggaaagacatgcaaaggtaaaccagagaatcggaaac  10626200                                               ------>ZmHOX2a(2)                --------->TOE2(3)                                         --------->CCA1(2)          <-----------GT1    --------->AHL20(2)                                        <---------ARR14(2)        <----------DOF2     --------->AHL20(1)                                    <---------ANAC58     ----------->GT1        --------->TOE1(3)                                    <---------ANAC58 <---------ARR14(2)         ------->GAMYB    <---                               <---------ICU4--------->ARR11(3)<---------AHL20(2)     <---------AHL20(1)                    --------->At4g35610 --------->ARR14(2)<---------MYB52(1)  ------>MYB83       <---          --------->ANAC58    --------->ICU4 <---------ARR11(3)<-----------GT1------>MYB46(1)   -----          --------->ANAC58    <---------ARR14(2)     --------->ARR14(2)       -------->P <---------AHL20(2)   taagatggatgcaagctctagcagcggtagcaaatattgctggatatgatcttcagaactggtattttcttttccattccaaccctaatatatatatgtg  10626300  Previous    Next  AGI:  At4g19500.1    Description:  disease resistance protein (TIR-NBS-LRR class), putative. similar to SNC1 (SUPPRESSOR OF NPR1-1, CONSTITUTIVE 1) [Arabidopsis thaliana] (TAIR:AT4G16890.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16318.1); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain AAA+ ATPase, core; (InterPro:IPR003593); contains InterPro domain Protein of unknown function DUF640 (InterPro:IPR006936); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); conta Range:  from: 10625798    to: 10630150    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version