Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                       --------->ZAT14                                                <---------At4g35610                                                --------->At4g35610                                                <---------ZAT2                      <---------ICU4                                                --------->ZAT2                  <---------AHL20(2)                                               --------->DEAR3(1)   <---------ARR14(3) <---------GLK1(2)                     --------->ARR11(3)           --------->ARR11(3) --------->ARR14(2)                    --------->GLK1(2)            <---------ARR11(3) <---------ARR14(2)                    <-----------ARR10            <---------ARR14(2) -------ANAC46       <---------CCA1(2) --------->ARR14(2)           --------->GLK1(2) -GAMYB         <----------DOF2        <---------ARR14(2)           --------->ARR14(3) --MYB46(3) ------>ZmHOX2a(1)         <---------GLK1(2)     ------>ZmHOX2a(1)----------->GT1   gtggattctttctcctctctttcatctcttcttgtgactagaatcttcacagccgagtactccttaagaaaatcttggaggtttaattcttgcatcacat  10443400                                                  ------>ZmHOX2a(1)                                               <---------YAB1                     --------->REM1(1)        <-----------GT1                     --------->YAB1        <---------GLK1(2)     <-------GAMYB--------->TOE2(3)   ------->GAMYB                      <----------DOF2     --------->At4g35610           ----------->RAV1(1)                   --------->TOE2(3)  <--------     <---------At4g35610           --------->MYB52(1)             <---------CCA1(2)  <----------DOF2<   cttcttcagttgtcatacttccttcatcatccaaaatcaacagaagattatccttcttgtgtttgatcatctcttctttaatcttctctttcaagctctc  10443500                                                                          <---------ANAC55(2)                                                                      --------->GLK1(2)                      <-------TEIL                              --------->ZAT2                     <---------ARR14(2)                         --------->At4g35610                     <-----------ARR10                       --------->At4g35610                     --------->ARR14(2)                      <---------At4g35610                     <---------ARR11(3)                 <---------At4g35610   --------->DAG2 -ARR11(3)          <---------GLK1(2)          <---------AHL20(2)    <---------GLK1(2) ---------ATHB12 <-----------RAV1(2)     ----------->GT1--------->At4g35610  ---------->DOF2        <   caatggataatcaagctcatcaggttcttcgccttcttcaaactcgtaaattatcgacaactgagcagctagaatctcgtaaagcgacttctcgtcttca  10443600                                                                                                   --                                     <---------ANAC58                --------->ANAC46              --            <---------REM1(1)        <---------ANAC58--------->At4g35610                          ---            --------->ALFIN1     <---------DAG2      <---------At4g35610                         ----          <---------At4g35610    <----------DOF2    <---------MYB46(3)     <-----------ARR10    -----          --------->At4g35610 <-----------GT1     <---------MYB52(1) --------->ANAC58         -------        <-----------RAV1(2)--------------->AtSPL8------->MYC3        --------->ANAC58     --------->ZAT2 ----------DOF2        <------ZmHOX2a(1)         <-------MYC3 <----------DOF2             --------->At4g35610   atctttttgttcaggtgtaaccagaggacattgtacttttcttgagtaacacgttggctgacttcttttgcaagccatgtcttccctataccagcttcac  10443700                                                                                     <---------ANAC58                                                                                     <---------ANAC58    <------ZmHOX2a(1)                                                            ------>ZmHOX2a(2) ---->MYB46(1)                 ---------->ID1              <-----------ARR10     ==================== ---->MYB83             --------->DEAR3(1)     <---------ARR11(3)       <----------DOF2 ------>MYB52(1)     <---------ALFIN1          --------->ARR11(3)      <---------ANAC58 ----->DEAR3(1)     <-------TEIL             <---------MYB52(1)        <---------ANAC58 ---->MYB46(3)  <---------TOE1(3)    <---------ATHB12      --------->GLK1(2)   <---------ARR11(3) -->REM1(1)     <---------------AtSPL8  ------->TEIL      <---------GLK1(2)    --------->ARR11(3)   <   caacgaggacggtttttgaaggtacaccgtcttgtcccaatgaatccattatcttcttcagaatctcttctctgcttgtttgatcttgcttctccatctc  10443800                                                                                    <---------WOX13(1)                                                                                   <------------CBF                                                                                 <---------TOE2(3)                                                                           --------->ICU4                                                                           <---------ATHB51                                 --------->TOE2(3)                         <---------YAB1                              <-----------GT1                              <---------AHL20(2)                             <-----------GT1                 <------------CBF    <---------YAB1                            <---------AHL20(2)              --------->ATHB12 <------------CBF      --------->AHL20(2)--------->ICU4                     <---------YAB1  --------->AHL20(1)       <     --------->AHL20(2) --------->AHL20(2)                 <------ZmHOX2a(2)-------->ATHB1       ---- ======HOX2a_HOX2a  <------ZmHOX2a(1)                     <---------ARR11(3)--------->ATHB12  ------- ------ZmHOX2a(1)  ----------->GT1   --------->ATHB12     --------->ARR11(3)--------->ATHB51  <------ZmHOX2a(1)   taggaaaataaaaaatgagagaggaaatatttaaacctttgatttgagttttcttgaagagatcattgttaaacaaaattattgagattgctactaggat  10443900                                                                       <---------ARR11(3)                                                                       --------->AHL20(1)                                                                  ------------>CBF       <---------YAB1                                            --------->ANAC46          --------->ZAT6   <---------DAG2                                 -------->P     --------->AtLEC2         -----------   <----------DOF2                            --------->ANAC46   --------->ANAC58        --------->MYB52(1) -----------GT1                            --------->ANAC46      --------->ANAC58       ------->GAMYB ------->GT1    ------->TEIL            <---------ZAT14  ----------->TBP               <---------MYB52(2) -->YAB1 <---------AHL20(2)             <---------ARR14(2)  <-----------GT1            --------->MYB46(3)   agtaactttatttttatgaacttaagagatgtattcagagagtataccacactacccctatatatccatgcaatatatgacaaatatcaactaacaatac  10444000                                                 <------------CBF                                             --------->TOE2(3)                                             --------->TOE1(3)                      ---------->DOF2      ------->TEIL                                 --------->YAB1         <---------AHL20(2)               <---------ARR14(2)            <---------GLK1(2)        <--- ->CBF  --------->AHL20(2)       --------->CCA1(2)                   --------->YAB1<---------ZAT14  <   aaaactaaaatttaaaattcgaaacaaagagagaggtatgagaagaaccttaattgtttagagtgacttaatcagattagttttctccactgatagtttt  10444100                                                                                                   <-                                                                      --------->ARR14(2)           --                                           <---------WOX13(1)        <---------At4g35610         ----                                         <---------MYB46(3)          --------->ZAT2            <-----                                         --------->ATHB12            --------->At4g35610  --------->ANAC58                                       <---------MYB52(1)            <---------ZAT2       --------->ANAC58 --------GT1                       ------>ZmHOX2a(1)       <-----------GT1            <-----------HVH21 ----------DOF2                 <---------YAB1           <---------AHL20(2)<---------MYB52(1)  ------   ttctttctagtttttgtttatgttttgttttgttatccttcgttgattgattcacttatttatacaagtccagctccgataacttccatgtcaagcctat  10444200                                                                                              <------                                                                                              <------                                                                                              -------                                                                                             --------                                                                                             <-------                                                                                           --------->YAB1                                                                                           --------->ATHB51                                                                                           <--------HAHB4                                                                         --------->ICU4    <--------ATHB1     ----------->GT1                                         <----------ID1                <---------ICU4 --------YAB1                                                --------->ANAC46             --------->AHL20(2) ---->ZmHOX2a(1)                                             --------->ANAC58             <---------ATHB12 ----->YAB1                                                  --------->ANAC58             <---------ATHB51 ----ARR14(2)      --------->YAB1                 <---------ETT(2)  --------->YAB1        --------->ICU4 --->ARR14(2)   --------->YAB1      <---------TOE2(3)      ---------->DOF2      <---------GLK1(2) <--   cctgattttgtaaaacaacaataacaaaattcaagttttagattacactctgtcgaaacaaaaacgccaagtataaatattagattcttccaataattat  10444300  Previous    Next  AGI:  At4g19050.1    Description:  mob1/phocein family protein. Identical to Putative disease resistance protein At4g19050 [Arabidopsis Thaliana] (GB:O50052); similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT5G45510.2); similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT5G45510.1); similar to unknown [Populus trichocarpa] (GB:ABK92757.1); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Mob1/phocein; (InterPro:IPR005301); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) Range:  from: 10438224    to: 10443797    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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