Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                      --------->ANAC58                                                    --------->ANAC58                                                    <---------bZIP60(1)            --------->DEAR3(1)                                                    --------->ANAC46             --------->MYB52(1)                                                    --------->bZIP60(1)         --------->AtMYB61                                                    --------->bZIP60(2)         <---------ALFIN1-----                                         <---------HSFB2a(2)                    ------->GAMYB  ------                                         --------->LBD16                       <---------MYB55(2)                     --------->ZAT18     --------->HSFB2a(2)                   --------->MYB46(3)           --------->YAB1               --------->LBD16             <---------ANAC58           ------           <---------ICU4               <---------LBD16             <---------AtLEC2        ---------     <------ZmHOX2a(1)               <------ZmHOX2a(2)      ---------->ID1     <---------MYB52(2) ----->GT1--------->ICU4  --------->MYB52(1)    <-----------HVH21   <---------ANAC58      --------->MYB46(3)   taaatgaggaccataatggtgagtccccaaacgatagcgatccctggaagagtcacgacattgtcgttttgcatgtttacaaccaccgatgcacaaccgg  10423100                        <---------HSFB2a(1)                        <---------HSFC1(2)                    --------->ANAC58                    --------->ANAC58             --------->HSFC1(2)             <---------HSFC1(2)             <------MYB46(1) ------>NtERF2             --------->HSFB2a(1)             <---------HSFB2a(1)      ------->GAMYB        --------->DAG2  --------->HSFC1(2)       ----------->GT1               ----------->GT1       ---------->DOF2<---------GLK1(2)          <---------ANAC58             <---------------AtSPL8 ---->At5g28300     --------->ANAC46--------->At4g35610                ----------->GT1 ----->GT1   <------MYB83    --------->LBD16     <---------ANAC46    <---------ANAC46          <----- --->LBD16  --------->MYB59<---------LBD16       <---------ANAC58    <---------ANAC58      <---------GLK1(2) >MYB52(1)  --------->MYB111(1)  <------ZmHOX2a(2)                   <---------ANAC58 --------->MYB52(1)   tgaataccaaaaagtaggttccaagaaactccgcgatcaactgaaaacatagcgtaaataaaaccgagatgtcttgtgaattggtacaaaacagagtctt  10423200                                        ----------->GT1                                      ---------->DOF2                                 <---------ZAT6            ---------->DOF2                                 ----------->GT1  <----------DOF2                          --------->CCA1(2)      <---------DAG2   --------->YAB1        <---------ARR14(2)    XXXXXXXXXXXXXXXXXXXX>MIR824 -----DOF2----------->GT1--------->ARR14(2)   <-----------GT1  <----------ID1 <---------ZAT14   ttcatttataacttgtaaaacatgttggatatggagagttaaaagtaaaaaccttttgtaagaaagggacagagactgagagtagagagtcttgtttctt  10423300                                                                                                  <--                  --------->ARR11(3)                                                              ---                  <---------ARR11(3)                              <---------ICU4    <-------GAMYB<---                ------->TEIL                                   <---------ICU4      <---------ANAC58             <---------YAB1  <---------ANAC58               <-----------GT1        <---------ANAC58  --------->ARR11(3)         <---------ANAC58              <-------TEIL            <---------ANAC46   caagggtcttgggttatgaatgtcttccatttcttgttgatgttcgacttcatccttgagattcaccattactacttcttctctggcgttgccatagccg  10423400            --------->LBD16            ------>NtERF2           --------->ANAC58           --------->ANAC46           --------->ANAC58          <---------LBD16        <---------ARR14(2)        --------->ARR14(2)       --------->GLK1(1)       <---------GLK1(1)       --------->CCA1(2)      <---------ARR11(3)      --------->ARR11(3)   --------->LBD16                 <---------HSFB2a(2)  --------->LBD16                  --------->HSFB2a(2) --------->HSFB2a(2)         <---------------AGL15                                                *TSS <---------HSFB2a(2)         --------------->AGL15   ---------->DOF2                           ------ -------ARR14(2)            <-----------------AGL3 <------ZmHOX2a(1)                <---------ANAC46 ------>ARR14(2)        <----------DOF2   ---------->DOF2<------ZmHOX2a(1)          <---------ANAC58 ------MYB52(1) --------->ICU4 <----------DOF2    <----------ID1                    <---------ANAC58   tttcccgagatatccgccataagtgacttttctctttttagaaacaaagaagaggaaaaggattgaactataaacgactgtttatgacttgtgagaatga  10423500              <---------ARR11(3)    <------MYB83         <------------CBF                                             <---------WOX13(1)    <------MYB46(1)     <---------AHL20(2)                                           <------------CBF   --------->MYB46(2)   --------->ATHB12                         <---------AHL20(2) <---------AHL20(2)   --------->MYB59  ------>ZmHOX2a(1)                            --------->AHL20(2) --------->ATHB12   --------->MYB111(2) --------->AHL20(2)                  <---------TOE2(3)       --------->AHL20(2)   --------->MYB111(1)<-----------TBP  <---------ANAC46  ----------->HVH21         <---------AHL20(2) --->YAB1     --------->ARR11(3)    --------->ALFIN1   <----------DOF2  <-----------GT1      --------   gaagtttggtagcgattatctcctatttattggcaaacatgggggagagagagacttctttgacgattttaatattaccagtttattaattgaaaaaaag  10423600                                       <---------AHL20(1)                                       --------->AHL20(2)                                       <---------AHL20(2)                                    --------->YAB1                                   <---------YAB1                                 <---------ICU4                        <----------DOF2--------->AHL20(1)   --------->GLK1(2)                   ---------->DOF2 --------->ICU4          <---------GLK1(2)             --------->TOE2(3)   --------->YAB1          ----------->ARR10            ----------->GT1   --------->YAB1    <---------YAB1                                   <---        <---------AHL20(1)   <---------AHL20(2)<---------TOE2(2)                          --------->LBD16        --------->AHL20(1)  --------->AHL20(2) <---------TOE1(2)                         <---------LBD16 -->DOF2--------->ARR11(3)  <---------AHL20(2)------>ZmHOX2a(1)                         <---------LBD16   aagaagatgatatattgttaataaagcttttttaataataataaattcctatgtttgtggagattctataccaggtctcaaattcaattttcagggatta  10423700                                                                                       --------->ZAT14                                                                                       <---------ZAT14                                                                                       --------->ZAT18                                                                                      <---------ANAC46                                                                                    <---------ANAC46                                                                                  <---------ZAT14                                                                                  <-------GAMYB                                                                                 <-----------RAV1(1)                            <---------AHL20(2)                                 <---------ANAC58                        <---------AHL20(2)                                     <---------ANAC46                       --------->AHL20(2)                                --------->ARR11(3)                --------->MYB46(3)                         --------->GLK1(2)   <---------ANAC58     < --------->AHL20(2) --------->YAB1                        <---------GLK1(2)------>ZmHOX2a(2)        < ------YAB1 <------ZmHOX2a(2)                        --------->AtLEC2    <---------ARR11(3)        <-   caattttttcttagatcaacaaatataaaatttatcgaaaattttagaatgctacatgcagaatttgtttgttttgatcttgtgtgttgtgcagagagcc  10423800               <---------ANAC58               <---------ANAC58          <---------AtLEC2         --------->ANAC46          <---------ANAC58   ------->GAMYB<------ZmHOX2a(1)          <---------ANAC58  --------->MYB46(3)      <---------ANAC58 --------->YAB1   <---------TOE1(2)                                        <---      <---------ANAC58<-------TEIL--------->LBD16                                 <---------AHL20(2) <---------YAB1<---------ANAC46------>MYB83                                      --------->AHL20(2) ---------ARR11(3)   --------->AtLEC2<------NtERF2     <---------ANAC58          <---------AHL20(2) <<<<<<<<<GT-1--------------->AtSPL3------>NtERF2      <---------ANAC58<----------DOF2        <------ --------CCA1(2)<---------SPL7 ------>MYB46(1)    <-----------RAV1(1)  <---------DAG2   <---------YAB1   tatatcattcgtgcatgtcgtacatgcataaccatccgcgcctaggattcaaatgttgcatacttgcaatctactttttgtttttaaatttttattctac  10423900                                    <-----------TGA1                                   --------->ANAC55(2)                                   --------->ANAC55(1)                                   --------->ANAC58                --------->YAB1     --------->ANAC58                <---------ICU4     --------->ANAC46        <-------TEIL <---------ANAC55(2)  <---------AHL20(2)                                   <-----    --------->ARR14(2)            <-----------STF1                                       <---------CCA1(2) -------DOF2   <---------YAB1     <-------TEIL      <---------ANAC46               --------->ARR11(3) -----GT1    --------->YAB1      <-----------GT1 <---------MYB52(1)                <---------ARR11(3)   tttccaaatattcatttataatcacataagtatatatacgtcattttatgcgttgtttgtatttcacataagtattcatttagaacatctcatatcgaat  10424000  Previous    Next  AGI:  At4g19030.1    Description:  NLM1 (NOD26-like intrinsic protein 1;1); water channel. Identical to Aquaporin NIP1-1 (NIP1-1) [Arabidopsis Thaliana] (GB:Q8VZW1;GB:O48595;GB:O49416); similar to NIP1,2/NLM2 (NOD26-like intrinsic protein 1,2), water channel [Arabidopsis thaliana] (TAIR:AT4G18910.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48005.1); contains InterPro domain Aquaporin; (InterPro:IPR012269); contains InterPro domain Major intrinsic protein; (InterPro:IPR000425) Range:  from: 10421536    to: 10423498    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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