Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               <-----------GT1                                        --------->ATHB12                                        <---------ICU4                                       <---------YAB1                                       --------->ICU4           <---------GLK1(2)                                     <---------ICU4             --------->ARR11(3)                                     --------->YAB1         ---------->DOF2                                    <---------ATHB51   --------->ICU4                --------->WOX13(1)  --------->ICU4     <---------YAB1                 <---------WOX13(1)              <---------YAB1   ----------->GT1      <---------AHL20(2)       <-------TEIL <---------YAB1      ------->TEIL           ---------->DOF2 >>>>>>>>>>WRKY63   <---------ARR11(3) <---------YAB1 ---   agagattgcatctactatcattcaacttacataaagaaataatgatttgactatataatgaataaagattttgcaaagtttcatgttaattgatgaaaga  10403900                     <---------ANAC46                     ----------->GT1                     <---------ANAC58                     <---------ANAC58                    --------------->AtSPL8                    <---------------AtSPL8                    --------------->AtSPL3                --------->ANAC55(2)                                     --------->AtLEC2                <---------ANAC55(2)                                     --------->ANAC58              <---------ICU4                                            --------->ANAC46            <           <---------ICU4               <---------ANAC46       <-------TEIL            --------->AHL20(2)           --------->YAB1      ----------->HVH21       ------>MYB46(1)  --------->ANAC58            -          --------->ICU4<-------TEIL <----------DOF2   <---------ARR14(2)      <-----------GT1     -- -------->GT1 --------->YAB1 <---------ICU4            ------>MYB83  <-------TEIL      <---------AHL20(2)   ctgtataatgccataatcatgtaacgtacaattctgaccctttcgcgttactaaacctatccagtttcatgttcatgcaatttacaaaattatatataca  10404000                                                                                            ------>ZmHOX2a(2)                                                                                           <------ZmHOX2a(2)                                                                                          <---------ARR14(2)                                                                                    <-----------RAV1(2)                                                                                 --------->YAB1                                                                                ==============HOX2a_HOX2a          --------->AHL20(2)                                            --------->ANAC46  --------->ARR14(2)          <---------AHL20(2)                                            --------->ANAC58 --------->GLK1(1)   <-----------GT1                 --------->ANAC58                     --------->ANAC58 <---------GLK1(1)   --------->ZAT6                  --------->ANAC58                    --------->SPL7  <------ZmHOX2a(1) ---------AHL20(2)          ---------->DOF2 <---------YAB1   ==========================HOX2a_HOX2a -------->AHL20(2)    <---------YAB1      <-----------GT1    <------ZmHOX2a(1)  <------ZmHOX2a(2) ------->AHL20(2)   --------->YAB1 ----------->GT1           =====================================HOX2a_HOX2a   aattaatactatatatatagaaacatgattcaaagacaagaaaattaccagtgtatttgtcgaggagtaatcgaacgctacgatcatcaggagatcggat  10404100             ------>MYB83             ------>MYB46(1)           --------->MYB46(3)           <---------MYB46(2)          --------->ANAC46                 --------->MYB52(1)             ------->TEIL             --        --------->REM1(1)  --------->ARR11(3)                          --------->ANAC58           <--     --------->TOE2(3)     <---------ARR11(3)                          --------->ANAC46   --------->YAB1     --------->TOE1(3) ---------->DOF2     <---------ARR14(2)          --------->ANAC58   <---------ICU4   gagattaccttcaccaaacaaatgagaaagaccttcatcgaagaatatcggatttatgttctccaatcccaaaacgcatctacatgataccatcatcacc  10404200           --------->ZAT6        <-----------GT1     <---------ICU4     -------->ATHB1     -------->HAHB4     --------->ATHB51     --------->YAB1     <--------HAHB4    <---------ATHB51                                                                           ------    <---------YAB1                                                                         ----------    --------->ICU4                                      <---------ARR11(1)            ----------->GT1  <--------HAHB4                                        <---------ARR11(3)            --------->LBD16  <---------ICU4                  ---------->DOF2       --------->ARR11(3)           <---------HSFB2a(2) --------->ICU4               --------->TOE2(3)        <---------CCA1(2)             --------->HSFB2a(2) <---------YAB1           --------->WOX13(1)         --------->YAB1                ------------------ ------->YAB1           <---------YAB1         ------->TEIL<----------DOF2        --------->ARR14(2) -------YAB1           <-----------GT1        <---------GLK1(2) ---------->ID1    <---------ARR14(2)   atcataattattaccactaatcgattatcaatccataaaagatagattgaatctctcatatcttttgttctattttttgtttcaaatccagaaaaaaaaa  10404300                                                <----------DOF2                                               ------>ZmHOX2a(2)                                              <------ZmHOX2a(2)                                             <---------ARR14(3)                                             <---------ARR11(3)                            --------->ICU4                                             --------->ARR14(3)                      --------->ALFIN1                                             <---------ARR14(2)                  ---------->DOF2             ----------->GT1      <---------AtLEC2<-----------RAV1(1)         <-----------HVH21     ----------->GT1          <----------DOF2--------->ARR14(2)              <---------ANAC58 ---->DOF2<------------CBF    --------------->AGL15                          <---------ANAC46 -------------->ANAC81    <----------DOF2    --------->AGP1                  <---------ANAC58 ------>ANAC81      <----------DOF2          --------->ARR11(3)             <-------TEIL ---------->DOF2   agaagaagagaaaattggttaactttctctttctttgtatggtctaagatctttgttgttgtttatgttttcttacgatgcgtcaaagtgggaaagatga  10404400                                                                                    <---------MYB52(1)                                                --------->ANAC58                   <------------CBF                                                --------->ANAC58                >>>>>>>>>>>>>>>>>LFY                                   <---------AHL20(2)                           <<<<<<<<<<<<<<<<<LFY                                   --------->AHL20(2)                        <------------CBF                                --------->TOE2(3)                         <---------MYB59                    <---------ANAC58    ----------->GT1                 --------->MYB52(1)                    <---------ANAC58  <------------CBF                 --------->MYB55(1)      ----------->GT1<----------DOF2<---------YAB1                    --------->MYB46(3)     <---------AtMYB61       ------>ZmHOX2a(1)---------->DOF2         <---------MYB52(2)    <--------   ccatggaatggtctaaagtttggcttttctccttcattaaaattgttaaaaagccattcgttttcttagataactaccgaattgccattggtttttacat  10404500                                                        <---------AHL20(2)                                                        --------->AHL20(1)                                                        --------->AHL20(2)                --------->ZAT14                <---------AHL20(2)                <---------ZAT14                --------->AHL20(2)             --------->YAB1                --------->AHL20(2)          --------->YAB1                   <---------AHL20(2)                                   <----          -------->HAHB4                <---------ARR11(3)     <---------bZIP60(2)  <-----------GT1         <---------YAB1                 --------->AHL20(1)<------------CBF       --------->CCA1(2) ---GT1--------->YAB1            <------------CBF      --------->AHL20(2) --------->ATHB12      <----   tttagtagataataatagtaaactagagcataccagattgaatatataatttaacaaaaaaattgacatggcaaattgattagatataacaattctaggc  10404600                                            <---------At4g35610                                            --------->ZAT2             <----------DOF2                --------->At4g35610         <-------TEIL          <-----------GT1                   <---------ZAT2             --------->CCA1(2)  ------>ZmHOX2a(2)                       <---------WRKY12            --------->ARR14(2) -----ANAC58 <---------------AGL15      <-----------HVH21    <---------ATHB12                       < -----ANAC58 --------------->AGL15  ---------->DOF2<---------ANAC46   <---------ARR14(2)      <------   ttgatccatatttatctttattcagtagataatttgagtaaaggtcagctctgatgtgaacaaatgaattcagatacaatttgttgtatgaaattttttc  10404700                             <---------ICU4                            --------->AHL20(2)                            <---------YAB1                   <---------AHL20(2)                --------->ATHB12  <---------AHL20(2)        <---------AHL20(2)            <---------AHL20(2) <---------YAB1               --------->AHL20(2)                      <            --------->AHL20(2) --------->ICU4           <---------AHL20(1)                     ------ --------->YAB1<---------AHL20(2)--------->AHL20(2)     --------->AHL20(1)                 ---------- ---------ATHB12<---------AHL20(2)<---------YAB1  ----------->GT1----------->GT1       ----------->GT1 -----GT1------->TEIL     --------->YAB1 <------ZmHOX2a(1)--------->TOE2(3)    ---------->DOF2 <-----   caatgaaaatgtatttatttattgattttcatcatttttattaggatggagattgaaaaatattaattagtgaataaatccaaaaggaaatgtaaaagtt  10404800  Previous    Next  AGI:  At4g18990.1    Description:  xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative. Identical to Probable xyloglucan endotransglucosylase/hydrolase protein 29 precursor (XTH29) [Arabidopsis Thaliana] (GB:Q8L7H3;GB:O49412); similar to XTR4 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 4), hydrolase, acting on glycosyl bonds [Arabidopsis thaliana] (TAIR:AT1G32170.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63333.1); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320); contains InterPro domain Xyloglucan endo-transglycosylase, C-terminal; (InterPro:IPR Range:  from: 10401921    to: 10404259    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version