Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      --------->ZAT18                                    <---------ZAT18                                    --------->ZAT14                                  --------->At4g35610                              <-----------HVH21                            ------->MYC2                            ------->MYC3     --------->ALFIN1                            <-------MYC3   --------->ALFIN1                            <-------MYC2  <-------MYC2                            <-------MYC4  ------->MYC2                            ------->MYC4  ------->MYC3                           <---------O2   ------->MYC4                           --------->O2  --------->ANAC55(2)                           --------->TGA1a<-------MYC4                           <--------ABF1 --------->TGA1a                           --------->ANAC55(2)                           ========================bZIP_bZIP                           <---------ANAC55(2)    <---------MYB52(1)     <---------TGA1a<-------MYC3  <---------ANAC46     <-----------HVH21 --------->O2 <---------TOE2(3)    --------->ANAC46   <---------ANAC55(2) ---------TGA2(2)     --------->bZIP60(2)<---------TGA1a --------->HVH21      --------->ANAC58   <---------O2              <---------YAB1 --------->TGA1       --------->O2<---------At4g35610 <---------TOE1(2)                           <-- ------At4g35610      --------->TGA1a   ------------>OsbHLH66      --------->ICU4            <------- ----->At4g35610      ----------->HVH21<---------ALFIN1          --------->YAB1         <---------YAB1 ---DOF2              --------->ANAC58 <------------OsbHLH66    <---------YAB1        --------->YAB1   gctgacgttaagctagttttcgacacgacacgtgttagcgcacacgtgtgggttctcatgttttttgtgataattcatatttaagcgattataagtcgta  10398500               --------->ATHB51               <--------ATHB1               <------------ATHB5               <---------ICU4               --------->ATHB12                           ----------->GT1               -------->ATHB1                          --------->YAB1               --------->YAB1                          -------->HAHB4              --------->ICU4                          <---------YAB1               <------ZmHOX2a(1)              <---------YAB1 <-------GAMYB            --------->ICU4         ---------->DOF2    ----- -------ZAT6  <---------ATHB12                      --------->YAB1   <----------DOF2       <---------AtLEC2 --ANAC46   --------->WOX13(1)                     <---------YAB1 <-----------GT1 ----------->GT1   gagtttgcaaactgcaatcattgaagaatttcgttgtagtaacttactaacttataatgatagtaaaataactttgtttaaaagaggaaatttgaatgaa  10398600                                      <---------YAB1                                    <---------ICU4                                    <--------HAHB4                                   <---------ATHB12                                   <---------YAB1                                   --------->ICU4                              --------->ANAC46                              --------->ANAC55(2)                    <---------ANAC58--------->ATHB51                    <---------ANAC58-------->ATHB1                    --------->ANAC55(2)                    <---------ANAC46--------->YAB1                    <---------ANAC55(1) <---------AHL20(2)                    <---------ANAC55(2)--------->YAB1                   --------------->AtSPL3                   <---------------AtSPL8                                                     -------                   --------------->AtSPL8   ----------->GT1                                   <------               <---------ICU4 --------->ANAC55(1)                    ---------->DOF2       --------->YAB1        <---------bZIP60(1)   <---------ANAC55(2)             ----------->GT1              <---------ICU4        --------->bZIP60(1)   --------->ANAC58            ---------->DOF2              --------->ANAC46        ----------->GT1<-------TEIL<---------ATHB51     ----------->HVH21           --------->ZAT18 - ----->DOF2<-----------GT1    --------->ANAC58        <---------ANAC46              <---------ZAT18 -   aagaattgtgatgttactaattacgtacacatacgcaattattataaggcaaaatgatgtgaaagtgtaaataaagacttgtgtagttcacgataatcac  10398700                 -------->HAHB4                <---------ATHB51                --------->ICU4              --------->YAB1             <---------AHL20(2)             --------->AHL20(2)         --------->AHL20(2)      <---------ICU4      --------->YAB1                                                    --------->bZIP60(1)      -------->HAHB4                                                    <---------bZIP60(1)      --------->ATHB12                                                  <---------REM1(1)     <---------ATHB12                  <---------ZAT14                  ----------->GT1     <---------YAB1                    --------->ZAT14             <---------At4g35610     --------->ICU4                <---------WRKY18(1)             --------->At4g35610 ------>ZmHOX2a(1)      <------ZmHOX2a(2)                      <-----------HVH21    --------->CCA1(2) ==============================HOX2a_HOX2a--------->ANAC46    <---------bZIP60(1)  --------->AHL20(1) -->YAB1<---------WOX13(1)  <---------ARR14(2)                --------->TGA2(1)    --------->ARR11(3) -----GT1<---------AHL20(2) --------->ARR14(2)  <---------ALFIN1   ----------->RAV1(2)  ----------->GT1 -------->TOE2(3)<---------ICU4    >>>>>>>>>WRKY18            <---------TGA2(1)---------->DOF2 <----- -------->TOE1(3)--------->YAB1   --------->WRKY12            --------->bZIP60(1)  <---------ARR11(3)   atccttaatgattaattaataatgagatcgaatcccttgacttcactcaaacaccttcacgatgatgtcatctgatgtaacaaaagatattagttaatac  10398800                                                        <---------GLK1(2)                                           ----------->GT1                                         --------->ANAC55(2)                                         <---------ANAC58                                         <---------ANAC55(1)                                  <------                                         <---------ANAC58                                     <------      --------->AHL20(2)                 <---------ANAC46--------->GLK1(2)          ----------->TBP--   ------->MYC3      ------->TEIL        <---------ANAC55(2)  <----------DOF2       --------->AHL20(2)   <-------MYC3   --------->ANAC55(2)   <-------TEIL  ----------->ARR10             <---------AHL20(2) ----ICU4  <-------TEIL            ----------->TBP --------->TOE1(2)              ----------->TBP <--   ttacacgtttatatacatatatgtaacttatatgtgtatatatacgtgtaaaacatgagattctcttttgcgatgtcttcatctatataaattccacttt  10398900                              <---------SPL7               ------>ZmHOX2a(2)             <---------ARR11(3)             --------->ARR11(3)             <-----------ARR10--------->ZAT14                            <------ZmHOX2a(2)             <---------AGP1   <---------ZAT18                           --------->ARR11(3)      --------->At4g35610   --------------->AtSPL3     --------->HSFB2a(2) <----------DOF2      <---------At4g35610   --------------->AtSPL8     <---------HSFB2a(2)------>ZmHOX2a(2)   <---------MYB52(1)  <-----------GT1             <----------DOF2      <---------ARR11(3)          -  <----------DOF2  <----------DOF2             =================================HOX2a_HOX2a         - ---DAG2    <---------CCA1(2)*TSS              ==================================HOX2a_HOX2a        < ----DOF2 --------->ALFIN1<-----------GT1      ------>ZmHOX2a(1)    <-----------GT1   --------->At4g35610 -------->ID1<---------ARR14(2)            <-----------GT1        <----------DOF2     <---------At4g35610 ---------GT1--------->ARR14(2) --------->SPL7--------->TOE2(3)   <---------DAG2  <-----------HVH21<-   tttcctttagctgtggatcttcttttttctaccgtactctatatttttccttactttctaggcaaaaactttacgatctttcaatgtcagaagaatttca  10399000                                                                                     <---------LBD16                                                                                   --------->ETT(2)      ----------->GT1                                           ------->GAMYB ---------->DOF2     <---------TOE2(3)                           --------->ARR11(3)       ---------->DOF2     <---------TOE1(3)               ---------->DOF2 <-----------HVH21  --------->ANAC58          <-- -------->ARR14(2)                --------->ANAC58  --------->WOX13(1)  --------->ANAC58         ---- -------->GLK1(2)                 --------->ANAC58<------ZmHOX2a(2)     --------->ANAC46      ------- ---------ARR14(2)         <----------DOF2       <---------ARR11(3)  --------->TOE1(2)        <------ZmHOX2a(1) --------GLK1(2)   <---------At4g35610  --------->YAB1 --------->YAB1--------->TOE2(2)       --------   agaatctgaggttatattttccgatgagtctttcacaaggaaagataacaagatcagtcacaacaacgaaaactacgaaagaaagtcgacggagaaggat  10399100                                                                                  <---------YAB1                                                                                --------->YAB1                                                                            <-------MYC3                                              --------->ANAC55(2)           ------->MYC3                                              --------->ANAC46             --------->TGA1a                                              --------->ANAC58             <---------ALFIN1                                              --------->ANAC55(1)          --------->O2                                              --------->ANAC58             <---------O2                                             <---------LBD16             ----------->RAV1(1)                       <-----------HVH21   --------->ARR14(2)          --------->ABI4(1)                      <---------ANAC46  --------->LBD16               --------->ANAC46                      <---------ANAC55(2)<---------MYB52(1)           --------->DREB2C(2)      <---------At4g35610             <---------LBD16                 --------->DEAR3(1) -------AHL20(2)  --------->GLK1(1) <---------ARR14(2)   ----------->GT1 <---------ALFIN1 ----->AHL20(2)   <---------GLK1(1) --------->ARR14(2) --------->ALFIN1------>NtERF2 ---->GT1  --------->LBD16   <---------ARR11(3)       <------ZmHOX2a(1)<-----------HVH21     <------- --->GT1 <---------LBD16<---------MYB52(1) <---------ARR14(2)   ----------->HVH21 --------->ICU4  ---   aaaatttcatctccggtgagaattccgtcaagaactactatccggtatacggaagaggagggagaaatgacaccgccacatgtcataatcgaaaaacgaa  10399200               <---------ANAC58    ---------->DOF2               <---------ANAC58 --------->TOE1(3)               <---------ALFIN1          <---------HSFB2a(2)               <---------ANAC46 --------->TOE2(3)             --------->SPL7          <----------DOF2     --------->RAP2.3(1)       <---------------AGL15        --------->At5g28300       <---------DAG2     --------->ATERF1(1)       --------------->AGL15       ----------->GT1     <---------WRKY18(1)     <------NtERF2            ----------------->AGL1     ------>NtERF2        ----------->HVH21    <---------ATERF1(1)       <-----------------AGL1 --------->ETT(2)       <------ZmHOX2a(1)   <---------DEAR3(1)        ------->TEIL            ----------->HVH21    <---------TOE2(3)         < ---ID1 <------NtERF2    --------------->AtSPL8      <---------ETT(2)<---------MYB52(1)   --------->HSFB2a(2) ------>MYB52(1)      <----------DOF2<---------TOE2(3)  <---------ALFIN1  <---------TOE1(2)    ------   gaacggaggcgcaaatggcgttttctttttgtacccttaaaggaagagacttgagtcgacaccgtaacaccgttcttaggatgaccggctttttggaagt  10399300                                                                    <---------DEAR3(2)                                                                    <---------MYB46(3)                                                                   <---------TOE2(2)                                                                   <---------DEAR3(1)                              --------->WRKY18(1)           <----------DOF2        ------>ZmHOX2a(2)    <-----------HVH21            <------MYB83  <---------ICU4--------->AHL20(2)                        <------MYB46(1) ---------YAB1  --------->AHL20(1)                       --------->MYB59 ----->GT1      <---------AHL20(2)            ------>ZmHOX2a(2) --------->ANAC46                   <-   ttaatattgatcccaaaataaaatgagaaccggtcaagtttagtttgatctatttgagttcggtttacgtcggttttcttcaaaatttggatgtgattta  10399400  Previous    Next  AGI:  At4g18980.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G45630.1); similar to unknown [Cucumis melo] (GB:ABQ53634.1); contains InterPro domain Protein of unknown function DUF584 (InterPro:IPR007608) Range:  from: 10398929    to: 10399523    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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