Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                              <---------DAG2                          -                                                            <----------DOF2                         -                                                        ------->TEIL                                <                                                      <---------ZAT18                               <                                                      --------->ZAT14            ---------->DOF2 ----              ---------->ID1                         <---------ANAC58        --------->ANAC58 -------             <-----------GT1                        --------------->AtSPL8   --------->ANAC58 -------        --------->GLK1(2)<-----------GT1--------------->AGL15      <-----------GT1     ---------->DOF2  --------->TOE1(2) <----------DOF2     ==============================================MADS_MADS<----- --------->YAB1   <----------DOF2      --------->ZAT6<---------ANAC58 --------------->AGL15   -------   taaacatgagaattttttcgctctttgttactcattcactcactctaaataggttgtgtaccctttttttttctggtttaagcaaaagagaaagacatgc  10370300 -------->HSFC1(1) -------->HSFB2a(2)                                                             --------------->AGL15 ---------HSFB2a(2)         ------->GAMYB                                       <---------------AGL15 ---------HSFC1(1)          ----------->HVH21          <---------GLK1(1)       --------->TOE2(3) --->TEIL                  <---------MYB52(2)        <---------AtLEC2      <----------DOF2 -->ANAC58                --------->At4g35610   <----------DOF2           <---------DAG2          --- -->ANAC58                <---------At4g35610  <---------DAG2        ---------->DOF2              <-- --TEIL              ----------->HVH21      <-----------GT1       ------>ZmHOX2a(1)          <-------TEIL -->AtLEC2       <----------DOF2         <----------DOF2         --------->TOE2(3) <---------YAB1 <--   atctagaagcccaaaaactctttgtgacaactgacaatgtagccttttaccttttgcatatcagtttcctaaaaagccttttcttaatatagaggtccat  10370400          --------->ALFIN1       --------->DAG2     ---------->DOF2 --------->ANAC58 --------->ANAC46                                                         <------NtERF2 --------->ANAC58                                           <-----------GT1                         < ------>ZAT14    <-------TEIL                           <---------YAB1  <---------DEAR3(1)          - -------ZAT18 <---------ANAC58                   <---------TOE2(2)   --------->ANAC46  <---------GLK1(1) -------ZAT14 <---------ANAC58                   <---------TOE1(2)  <-------TEIL--------->ICU4<------   tgcactccaaaggtgtgcgttcatgagcccatgtagttgataacttcatcgtatgtttatgtttactacatacgtcgtcgtcaagatggaattcacatct  10370500     <-------TEIL <---------AHL20(2) --------->AHL20(2)       --------->GLK1(2) ---------AHL20(2)       <---------GLK1(2) -------->AHL20(2)   ---------->DOF2                                   <-----------GT1            <-- ---At4g35610<----------DOF2                        <---------ALFIN1  --------->AHL20(2)      <------   gattaaattcatttcctttgaaaaaaagattccttccaacatggctacaatccaacaccttcacttagaaaatttactactgaccaaaaccaagagcatt  10370600                                       --------->AHL20(2)                                          --                                       <---------AHL20(2)         <---------ARR14(2)             <---                                      --------->ICU4              <---------TOE1(2)              ----                                      <---------YAB1          ---------->ID1                     <---                      <---------MYB46(3)                    <------MYB83  <---------ARR11(3)     ----                 ------>ZmHOX2a(1)  --------->ATHB51        <------MYB46(1)                      <---             --------->ARR11(3)     <---------ICU4          <---------MYB46(3)                   ----             <---------ARR11(3)     <--------HAHB4         <---------AtMYB61                    -----        --------->AHL20(2)          --------->YAB1        <---------MYB52(1) <----------DOF2    <----        <---------AHL20(2)     <---------YAB1            <-------GAMYB    --------->ARR11(3)    ----- ---------->ID1 --------->TOE2(3)  --------->ICU4    <---------ZAT2       <---------ARR11(1)    <---- -------AtMYB61 --------->TOE1(3)  --------->AHL20(2)<---------At4g35610 <---------CCA1(2)    ------- ----DOF2<-----------GT1<---------MYB52(1)        ---------->DOF2 --------->ARR14(2) <---------MYB52(1)   ttggtcgtattttaatatccttagtcgttgtctatgaataattaatatgacttacagctcgttggtcgtattttcatatctttattcgttgtctattaat  10370700 ------->ICU4                <---------------AtSPL8 -----ATHB1                  <---------ICU4 ---->HAHB4               --------->ATHB12 -----HAHB4            --------------->AGL15 ----->YAB1            ----------------->AGL1 ------ICU4            <---------LBD16 ----->ATHB51      --------->ARR14(2) ---->ICU4      --------->ANAC55(2) -----ATHB51   <---------TOE1(3)                 --------->TOE2(3)                               <--- ---->AHL20(2) <---------TOE2(3)                ----------->GT1       <---------YAB1             ==== -----YAB1     *TSS<---------ARR14(2)       --------->AHL20(2)    --------->YAB1          ----------- -->YAB1      <-----------GT1--------------->AtSPL8            --------->YAB1             --------->WRKY12   aattactatgacttattaacgtattccctgattagtacaactaatataaaatgttaatcttcttctcataatattcttgaagcaaattagcactgaccga  10370800                                                               --------->GLK1(1)                  ---                                                               <---------GLK1(1)                  ===                                                               ------>NtERF2                     ----                                                              --------->ARR14(2)                 <---                                                        <---------ARR14(2)                       ====                                                        --------->ARR14(2)                      -----                                                 --------->At4g35610                            <----                                               <---------------AGL15                            -----                                               --------------->AGL15                           <-----     --------->AtLEC2              <---------MYB52(1)  <------ZmHOX2a(1)                <---------HSFC1(2) ============================HOX2a_HOX2a      ----------------->AGL2                    <---------HSFB2a(1) <------ZmHOX2a(2)         --------->ZAT14    <-----------------AGL1                    --------->HSFC1(2) ---ZmHOX2a(2)             --------->ARR14(2) <-----------------AG               --------->MYB52(1) ============================HOX2a_HOX2a      ----------------->AGL1        --------->DAG2=========== >HVH21               <------ZmHOX2a(1)       <-----------------AGL2       ---------->DOF2<----------DOF2   tcgatccatggaagaggtgaagaaggatgtatactcggtttgggcattaccagatgaggaatcggagccccgattcaaaaagctaatggaagctttgaga  10370900                               --------->TGA2(2)                              <-----------HVH21                              <-----------TGA1                             --------->ANAC55(1)                             --------->bZIP60(1)                             <---------bZIP60(1)                             --------->bZIP60(2)                             --------->ANAC58                             --------->ANAC55(2)                             <---------ANAC55(2)                             --------->ANAC46                             <---------O2                             --------->O2                   <---------At4g35610                             --------->ANAC58               --------->At4g35610                             --------->TGA1a<-----------ARR10                             ================================bZIP_DOF                             <---------TGA1a<---------ARR11(1)                            <-----------STF1------->TEIL   ------>NtERF2                           <---------ALFIN1<---------ARR14(1)     <-----------GT1      ------>ZmHOX2a(1)<---------CCA1(2)<------NtERF2  <---------ARR14(2)<---------ANAC58    <------NtERF2     <---------bZIP60(1)  --------->ARR14(2)<---------ANAC58   ------>NtERF2      <---------ATERF1(2) --->ZmHOX2a(2)    <-------TEIL----------->HVH21          --------->bZIP60(1) ================================HOX2a_HOX2a<---------ARR14(2) ----->CCA1(2)    --------->ARR14(1)  --------->DEAR3(1)  --------->ATERF1(2) ---ZmHOX2a(2)   --------->ARR11(1)   <---------DEAR3(1) --------->RAP2.6(3) ================================HOX2a_HOX2a--------->ARR14(2) --------->At4g35610             ------ ---->AGP1       --------->ARR14(2)  --------->ATERF1(1)--------->MYB52(1)                --------->At4g35610 -----ARR14(2)   <---------ARR14(2) <---------ATERF1(1)----------->HVH21                  --------->ZAT2 ---->ARR14(2)   <---------GLK1(2)  <-----------HVH21--------->At4g35610                  <---------At4g35610 ----GLK1(1)   ----------->ARR10   --------->DEAR3(1)<---------At4g35610      <---------ARR11(3) ======================================bZIP_DOF   <----------DOF2             --------->ARR11(3)   tccgaattcactggcccaagattcgttcctcacgtcaccgtcgccgtatctgcttatctgacggcagacgaagccaagaagatgttcgaatcagcttgcg  10371000                               <---------ANAC58                         --------->WRKY38(1)                         --------->WRKY12                        <---------MYB52(1)                       <-------GAMYB                     <------NtERF2                   --------->DEAR3(1)        --------->HSFC1(2)                       ----------->RAV1(2)                   <---------ALFIN1          <---------HSFC1(2)                   <---------ALFIN1                 ------>NtERF2 <---------ANAC58                                   --------->AtMYB61                 --------->ABI4(1)           <---------HSFB2a(1)                 <---------MYB55(2)                 <---------ATERF1(1)         --------->HSFB2a(1)       <---------ANAC58                --------->DEAR3(1)         --------->ARR14(2)      <---------ANAC58 ------>MYB46(1)                --------->DREB2C(2)        <---------ARR14(2)      <---------ANAC58 ------>MYB83                --------->ANAC46         --------->LBD16     <---------ANAC58    --------->MYB46(3)     ---------->DOF2------>NtERF2      <---------LBD16  <------------------------ANAC81    <---------ANAC46   ----------------------->TaNAC69(2)<---------ALFIN1<----------DOF2   <---------ANAC58    ---------- ----->HVH21 <---------ALFIN1------>ZmHOX2a(2)<----------DOF2<---------ANAC58  --------->ANAC46  ----   acggtcttaaagcttacaccgccaccgttgatcgcgtctccaccggaactttcttctttcaatgcgttttcttgcttctccaaaccacccctgaggtata  10371100                                 <---------YAB1                             <----------DOF2                            ------>ZmHOX2a(2)                          <---------ARR11(3)                          --------->ARR11(3)                      --------->ARR14(1)                     <---------GLK1(2)                     --------->ARR14(2)                     <---------ARR14(2)     ==============================HOX2a_HOX2a                    --------->DAG2                <----     <------ZmHOX2a(1)--------->CCA1(2)                          ---------->DOF2           --------->ATHB12 ->GT1  <----------DOF2<-------TEIL                          <---------YAB1  ------>ZmHOX2a(1)  ----- ------>DOF2         --------->ARR11(1)                      <---------TOE2(3)        <---------YAB1   aaagtcaggacttttcatttcaagattcgatctttctaatagaattgtatagaagacatacttaagataaagtttagtcctgactaatattcttgattac  10371200  Previous    Next  AGI:  At4g18920.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G45690.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47983.1); contains InterPro domain Protein of unknown function DUF1264 (InterPro:IPR010686) Range:  from: 10368766    to: 10370223    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g18930.1    Description:  cyclic phosphodiesterase. Identical to Cyclic phosphodiesterase [Arabidopsis Thaliana] (GB:O04147); similar to cyclic phosphodiesterase, putative [Arabidopsis thaliana] (TAIR:AT4G18940.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47982.1); contains InterPro domain 2 , 3 cyclic phosphodiesterase, plant; (InterPro:IPR012386); contains InterPro domain RNA ligase/cyclic nucleotide phosphodiesterase; (InterPro:IPR009097) Range:  from: 10370715    to: 10372056    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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