Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                <----------DOF2             --------->TOE2(3)         --------->GLK1(1)         <---------GLK1(1)   ------>ZmHOX2a(2)  --------->CCA1(2)                                                            <---------At4g35610  <------ZmHOX2a(2)                                                        <-----------RAV1(1) <---------ARR14(2)                                                        <---------ANAC46 <-------- --------->AGP1                       <---------DAG2                 <---------MYB52(1)--------->TGA2(1) <---------ARR11(3)          <---------MYB52(1)                 ------>ZmHOX2a(2)      <---------bZIP60(1) --------->ARR14(2)        <---------ANAC58                    <---------GLK1(1)       --------->bZIP60(1) --------->ARR11(3)        <---------ANAC58                   <---------ARR11(3)<---------ANAC46 -------->GLK1(1)        ------>NtERF2<----------DOF2<----------DOF2<-------GAMYB <---------At4g35610 ---------GLK1(1)---------->DOF2    <------------------------ANAC81<-----------RAV1(1) <---------TGA2(1)   agagatctgtgatttcctttaaaacgctgccgtttctctccttttttttgtttctctttctcttgatctctgttgttctgtggctgatgatgtcactaac  10330000                                                                                                    <                                                      --------->CCA1(2)             --------->YAB1 --      <---------ALFIN1                          <---------TOE2(3)                --------->YAB1    <-   ------>NtERF2         <-----------GT1    --------->TOE2(3)          <---------ANAC46--------->AHL20(2) -MYB52(2)    ------>NtERF2                 <----------DOF2 <---------ARR11(3)--------->YAB1     ----   aacgatgcccacttgcctccatcaatttttcaatctctctcatcttctttaatgtgatacaagttctcatcttcagtgtataagaatcataaattttgat  10330100                                                                                 --------->ZAT2                                                                                 <---------ZAT2    <---------GLK1(2)                                                          <---------ALFIN1   <---------At4g35610       <<<<<<<<<TBF1                                  <-----------------AGL1 ---------MYB52(1)        <<<<<<<<<TBF1                                     <-----------------AGL2 ---->ZmHOX2a(1)       <<<<<<<<<TBF1                                     <----------DOF2         <--- ---------DOF2      <<<<<<<<<TBF1               <---------ZAT2    <-----------GT1----------->RAV1(2) -->ZmHOX2a(2)   <<<<<<<<<TBF1                  --------->At4g35610  <----------DOF2      -----------   cctttagcttctctgtttcttcttcttcttcttcttcccttgtaacagagagctcgaaagttttcatttttctttctttccccatctgggttttcaattt  10330200                                             ---------->DOF2                                       --------->ZAT18                                       <---------ZAT18               --------->ATHB12     <---------ANAC46                            <-----------------AGL1     <-----------GT1             --------->GLK1(2)                    --------->ANAC46    --------->AHL20(2)        <---------TOE2(3)                     --------->ANAC58 --------GT1  ------>ZmHOX2a(1) <---------ARR11(3)              <-----------HVH21             <------ ->CBF      ----------->RAV1(2) --------->ARR11(3) <------------CBF --------->ANAC58          <------   cactaatttactactcctgatttgggttttttgagattttgtggacttaaagctattgccatagtttgtcacacaaaatcacttcaaatttggaaacttt  10330300                                                  ---------->DOF2                                                 <------ZmHOX2a(1)                                              <------ZmHOX2a(1)                                           <---------HSFB2a(2)                                           <---------LBD16                                          <---------ANAC46                  --------->AHL20(2)                                      <---------GLK1(2)--------->CCA1(2)    <---------AHL20(2)                                      <---------ARR14(2)             --------->At4g35610                        <------MYB46(1)--------->GLK1(2)             <---------At4g35610            <-------TEIL<------MYB83 --------->HSFB2a(1)    <---------CCA1(1)            ------>NtERF2   --------->ICU4      --------->MYB59--------->ARR14(2)    <---------RVE1(1)         ------>NtERF2 < ---DAG2    ------------>CBF         <---------HSFB2a(1)   --------->ARR11(3)        --------->DEAR3(1) ----DOF2  --------->CCA1(2) --------->ICU4--------->LBD16 <---------ARR11(3)  ----------->TGA1     -   ttgcaaaaatgagatacaattcgatttggtacttatgcaagattccgaggaggaaagagatgatatttttctgctgaattaatgacgacgacgactacta  10330400                                         <---------ARR14(2)                                  <---------HSFB2a(1)                                  --------->MYB46(3)                             --------->ANAC58                             --------->ANAC58                             --------->ANAC55(1)                             <---------ANAC55(2)                           <-----------ARR10            <---------ANAC58 --------->ANAC46  ---------->DOF2  --------->GLK1(1)            <---------ANAC58 --------->ANAC55(2)                <---------GLK1(1)                 <--            <---------ANAC46<---------LBD16  <---------HSFB2a(2)--------->CCA1(2)                <---         <--------P       <---------REM1(2)  <---------YAB1    --------->ARR11(3)        --------->ARR14(2) ----------ID1      <<<<<<<<<TBF1 --------->KAN4(1)            <---------ARR11(3)        <---------ARR14(2) -------->ANAC46 <<<<<<<<<TBF1   <---------KAN4(2)   <-------TEIL--------->MYB52(1)     <---------CCA1(2)   ctacgacaagggttgcttcttcttcttcaacacggaacaatcgaattctgaaagatgcaaatggagatatcggtgagcatcttcgtaaccatatccattt  10330500                                                            <---------------AGL15                                                            --------->TOE2(3)                                                            <----------DOF2                                                       <---------ANAC58                                                       <---------ANAC58                                                   ----------->HVH21                                                   ------->GAMYB                                                 <---------At4g35610          --------->ATHB12                      <-----------GT1 -------TOE2(3)                           ------>ZmHOX2a(1)----------------->AGL1         <---------- --------GT1                     --------->At4g35610--------->MYB52(1)                ---------->DOF2   aacgaattgtattcatttgaagaacaatatgcataagcagagtcctgttttaactgaccgtgccttaatgagagacctcattgttctccaaaggtcacgg  10330600                                                                                                    -                                                                                           ==========                                                                                        =============                                                                                        =============                                                                                  <---------HSFB2a(2)                                                                              ------>ZmHOX2a(2)    <-                                                                              =================HOX2a_HOX2a                                                                              ====================HOX2a_HOX2a                                                                             <------ZmHOX2a(2)    <--                                                                             =====================HOX2a_HOX2a                                     --------->ANAC46                        ==================HOX2a_HOX2a                                     --------->ANAC58                       <---------ARR11(3)    ---                                     --------->ANAC55(1)                    --------->ARR14(3)    ---            --------->At4g35610      --------->ANAC58       <---------ANAC58--------->ARR11(3)    ---            <---------At4g35610    <---------ALFIN1         <---------ANAC58<---------ARR14(3)    ---         <-------TEIL       <---------ANAC58            <---------GLK1(1)   <---------ARR14(2)    <--        <------ZmHOX2a(2)   <---------ANAC58           <---------ARR14(2)   --------->AGP1 <------ZmHOX2a(1)        =========================HOX2a_HOX2a        <---------ANAC46        --------->ARR14(2)    <--       --------->AGP1       <---------ANAC46      <---------ANAC46         --------->GLK1(1)      <--       --------->ARR11(3)  <---------ZAT2       <-------GAMYB              <---------GLK1(1)    -----      <---------GLK1(1)    --------->ZAT2------>NtERF2 --------->ARR14(2) ----------->ARR10==========      --------->GLK1(1) ----------->RAV1(2)    <-----------RAV1(1)   ---------->DOF2    <------ZmHOX2a(1) -HVH21<---------ARR11(3) ------>ZmHOX2a(1) ------>ZmHOX2a(1)    --------->LBD16  --------->HSFB2a(2)   tctcttagagatccatctgcgagccctcctgcttggaacacgcctccttctgttgtggatttgcttccgaagaaaggagatcttgtggaaggaggaagaa  10330700          ---------->DOF2         <---------AHL20(2)   <---------MYB52(1) ----->ZmHOX2a(2) =====HOX2a_HOX2a ======HOX2a_HOX2a =====HOX2a_HOX2a -----ZmHOX2a(2) -------ARR11(3) ------>ARR11(3) ------>ARR14(2) ------>ARR14(3)                                     ----------->RAV1(2) ------>GLK1(2)                          <---------ANAC58 -------ARR14(2)                     <----------DOF2 <---------At4g35610 -------ARR14(3)           <------MYB83  <---------ANAC58 -------AGP1               <------MYB46(1)    --------->ARR14(2)                              <------ ------>ARR10             <---------TOE1(2)   <---------ARR14(2)             ---------->DOF2<-------- ======HOX2a_HOX2a        <---------TOE2(2) <---------MYB46(3)   <----------DOF2        ------>ZmHOX2a(1)   gatctgttgatttaaagaagtctagtcgtaggttgtctgctttgagtggttcttcacctgttgtcaactttgggacatctaaagtgactccttctgatga  10330800                                       <---------ZAT6                    ---------->DOF2    ----------->GT1                  ----------->HVH21 <------ZmHOX2a(1)                                      --------->YAB1               <---------ZAT6      <------MYB46(1)                                        <---------YAB1             --------->MYB52(2)    <------MYB83                                        <---------YAB1          <-----------HVH21      <--------P                                         --------->ICU4 ---YAB1 ------>ZmHOX2a(1)     <---------MYB46(3)     --------->GLK1(2)             <---------YAB1 -At4g35610<---------MYB52(1) <---------ZAT6        <------ZmHOX2a(1)          <---------LBD16   ----   gaggtctggtcctgttagtggtgaaagggatagtggtaggagagttaagagagaggaatctagtagaaagagttatagaattggggatgattatcaaaat  10330900  Previous    Next  AGI:  At4g18820.1    Description:  ATP binding / DNA binding / DNA-directed DNA polymerase/ nucleoside-triphosphatase/ nucleotide binding. similar to ATP binding / DNA binding / DNA-directed DNA polymerase/ nucleoside-triphosphatase/ nucleotide binding [Arabidopsis thaliana] (TAIR:AT5G45720.1); similar to hypothetical protein OsJ_012336 [Oryza sativa (japonica cultivar-group)] (GB:EAZ28853.1); similar to hypothetical protein OsI_003562 [Oryza sativa (indica cultivar-group)] (GB:EAY75715.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48015.1); contains InterPro domain DNA polymerase III clamp loader subunit, C-terminal; (InterPro:IPR008921); contains InterPro do Range:  from: 10330382    to: 10334279    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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