Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                    <---------ARR14(2)                                                  --------->GLK1(2)                                                  <-----------ARR10                                                  --------->ARR14(2)                   --------->CCA1(2)                                      --------->At4g35610                             --------->TOE1(2)                                 <---------WRKY18(1)               <---------DAG2   --------->ANAC58                              <---------ANAC58   <---------CCA1(2) <----------DOF2  --------->ANAC46                  --------->At4g35610 <---------ZAT2         --------->YAB1         --------->ANAC58       ---------->DOF2     <----------DOF2    <-----------------AGL1         <---------TOE2(3) -------ID1       <---------At4g35610 --------->ZAT2      <----------DOF2    <---------YAB1 ---ATHB12  --------->CCA1(2) <---------ANAC58----------------->AGL1     --------->TOE2(3)   agacaaaatcaaagagacggagcttaaacctttcttgaccagcagtgtcccaaatctgggctttgatgactttttcattaacattcaagctacgagtcgc  10321200                                                                                                -----              <---------MYB52(1)                          --------->ANAC58                      <----             <-------GAMYB                                --------->ANAC58                  <------ZmHOX2a(2)            ------>ZmHOX2a(2)               ------>ZmHOX2a(1)                  ----------->RAV1(2) <-            <---------MYB46(3)             <---------ANAC46           <----------DOF2--------->MYB46(3)           <------ZmHOX2a(2)     --------->ZAT14        ---------->DOF2        --------->At4g35610---          --------->ARR14(2)     <---------ZAT14     <---------HSFB2a(2)     <---------ALFIN1--------   gaactcgaccccgatcgttgatttagactcgagactaaactcgttcctggtgaatcgagaaagcaaattggactttccaacacctgaatcaccgatcaga  10321300                                          ------>NtERF2                                          --------->LBD16                           <---------At4g35610                           --------->At4g35610                      --------->YAB1     --------->ANAC46          --------->ANAC55(2)            --------->ANAC58 ---->ARR14(2)        <---------ICU4     --------->ANAC58                                          -- -----ARR14(2)       <---------ATHB12   ------->GAMYB                                              -- --------ALFIN1      --------->ICU4     <---------LBD16                                            -- ------>MYB46(3)--------->YAB1          --------->MYB46(3)           ---------->DOF2             ---- ->YAB1   <---------ANAC55(2) --------->At4g35610 --------->ZAT6 --------->YAB1             ---------   accaccttgaataggtaatcgtaatcatcatctgctctgtaacccgccattaacacttctcactgaatcaaaaaagcttcacactttcaacgaataaaga  10321400                                                        <----------DOF2                                                     <-----------GT1                                                <----------DOF2 ------->ANAC58     --------->LBD16             <---------DAG2                                     -- ------->ANAC58    --------->HSFB2a(2)         <---------ANAC58                               ------>ZmHOX2a(1) --------->GT1     <---------HSFB2a(2)         <---------ANAC58                     --------->AHL20(2) ----->MYB52(1)  ------>ZmHOX2a(2)           <-----------GT1   <----------DOF2 <-------TEIL  -------- ->DOF2       --------->YAB1            <------------------------ANAC81 <----------DOF2 <---------AHL20(2)   aacgaaaattgctctatgatcccagaaaattgaacaaaacttcgattttgcttttttactttcttctttattctctttagattcaaatatttattcctca  10321500                                                                   <---------ARR11(3)                                                                  --------->YAB1                                                                 <---------YAB1             ---------                                  <---------TOE2(3)           *TSS<---------ICU4            ---------        ---------->DOF2           <---------TOE1(3)     <---------ZAT2        <---------GLK1(2) ------->GLK1(1)            --------->DAG2              --------->ZAT2    <---------MYB52(1)<-------- ->TOE2(3)                 ---------->DOF2        <----------DOF2--------->ICU4--------->GLK1(2)   gatttctacagaaagacacagactttgaaaaaagttagggtaagactggtgtctttctagctggaccatgatcaccgatagattctgggtgaaatatttt  10321600                                                  <---------ETT(1)                                                  ----------->HVH21                                                 ------>ZmHOX2a(2)                                                <------ZmHOX2a(2)                                                --------->CCA1(2)                                               --------->ARR14(2)                                               <---------AGP1                                               <---------ARR11(3)                                      <-----------RAV1(2)                      <---------ARR14(2)       <---------ARR14(2)                      --------->ARR14(2)     ----------->ARR10                      <---------GLK1(2)      ---------->TaMYB80                    --------->LBD16  <------ZmHOX2a(2)            <----------DOF2                  <- >AHL20(1)         --------->LBD16  <---------ARR11(3)     --------->TOE1(3)                       -- >ARR11(3)        <---------LBD16   --------->ARR11(3)     --------->TOE2(3)      <-----------GT1 <-- -AHL20(1)     -------->P<-----------GT1    <--------P    ----------->GT1   ------->TEIL <----------DOF2   gtatacatgtactaaactaccccggattcactccctaagatcaggggtagatccgacatttcgttaaacttttgtatgtatatgttacatgctttcattt  10321700                          <---------MYB46(3)                         <---------AtMYB61                   --------->ALFIN1             --------->DAG2            ---------->DOF2    ----------->GT1                               ------>ZmHOX2a(2)      <----------ID1   <---------MYB46(3)                                  <---------ARR11(3)      ----------->GT1 --------->ALFIN1                                     --------->ARR11(3)     --------->DAG2<---------AtMYB61                                     <---------YAB1   ---------->DOF2 <---------ZAT6           <---------DOF5.7(2)        --------->YAB1 --------------AGL15  <---------AtMYB61     --------->MYB52(1)         <---------ICU4 ------------->AGL15  <---------DEAR3(1)   <---------WRKY38(1)        <---------ATHB12 ---------------AGL1<---------MYB46(3)     <---------WRKY12           --------->ICU4   tcttgaaaaggtcaaaaagtagtggtggtggtcatgttacattggtaaacggcgatatttcagtcactctcaatgatgatctaacaaaaatgaaacattt  10321800                                 --------->ANAC46                                 --------->ANAC58                                 --------->ANAC58                               <-----------GT1                             <----------TaMYB80                         <---------ANAC46                      --------->GLK1(2)                     <---------GLK1(2)                     <---------ARR14(2)                                                       <------                     --------->ARR14(2)                                                       <------                   <---------ZAT18                                                            <------                --------->MYB52(2)               ------->GAMYB                               <-------   ctagctctatcttctagttagtggattctgtatatacccaatgggtttcaacacacactaaaatggaagcccatatgggctaatcacatagtagttgtgt  10321900                                               ----------->GT1                                               --------->O2                                           ------>NtERF2                                        <---------At4g35610                                        --------->ZAT2                                        --------->At4g35610                  <---------ANAC55(2)    -                                       <-----------RAV1(1)      <--------ATHB1                   ---- ---ANAC58      <---------TOE1(3)   <---------ARR14(2)          --------->ATHB12    --------->ANAC55(2) ---ANAC46      <---------TOE2(3)   --------->ARR14(2)         --------->ICU4----------->GT1     ---- ---ANAC58  <----------DOF2         --------->ARR11(3)         <---------ATHB12     <---------ANAC55(2) ----------------TaNAC69(2)        <---------CCA1(2)---------->DOF2          --------->ANAC55(2) ----   gtattgtctaaattctttgaggttagcaaaaactcacatatctgctgccatgtgaaaagagttcaatgatttgtgtattatgtaatatgtaatccaaaaa  10322000                                                                                      <--------HAHB4                                                                                      --------->ATHB51                                                                                 ------>ZmHOX2a(1)                                                                           <---------ATHB12 <---------At4g35610                                                      --------->ANAC46 --------->At4g35610        ---------->DOF2                             <---------ALFIN1 ------>TEIL<---------TOE2(3)                                          --------->ZAT14<---------ICU4 ----->ANAC58      <----------ID1      --------->DAG2                --------->ANAC46 --------->ATHB12 ----->ANAC58    ----------->GT1      ---------->DOF2               ------>ZmHOX2a(1)<---------YAB1 ----->ANAC46  ---------->DOF2  ----------->GT1                    <---------ALFIN1  --------->ICU4   cgcatctgtacattaagaaaagaaacaaaaaaaagagtgaaaaaggaacatagacaaatgttctgtgctcctctccactcatcctccattattagccaaa  10322100  Previous    Next  AGI:  At4g18800.1    Description:  AtRABA1d/AtRab11B/AthSGBP (Arabidopsis Rab GTPase homolog A1d); GTP binding. similar to AtRABA1c (Arabidopsis Rab GTPase homolog A1c), GTP binding [Arabidopsis thaliana] (TAIR:AT5G45750.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48023.1); contains InterPro domain Rab11-related (InterPro:IPR015595); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras (InterPro:IPR013753); contains InterPro domain Small GTP-binding protein; (InterPro:IPR005225); contains InterPro domain Ras small GTPase, Rab type; (InterPro:IPR003579); contains InterPro domain RNA polymerase sigma factor 54, interaction; ( Range:  from: 10319873    to: 10321562    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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