Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                           --------->TOE1(2)                                                         --------->TOE2(2)                                                        <---------ANAC55(2)                                                        <---------ANAC58                                                        <---------ANAC58                                                        =========================bZIP_DOF                                                        --------->ANAC55(2)                                                        <---------ANAC46                                                        <---------ANAC55(1)                                                        <---------TGA1a                                                     <---------MYB52(1)                                                    <-----------HVH21                                                   --------->ANAC46                                                   --------->ANAC55(2)                                                   --------->ANAC58                                                   --------->ANAC58                                                   --------->O2                                 -----                                           --------->MYB52(2)                                   <----    <----------DOF2                       <---------TOE1(2)                                     -----   <---------HSFC1(2)               <----------DOF2--------->ANAC55(1)                         ------   --------->HSFB2a(1)              ==============================bZIP_DOF                     <-----   --------->HSFC1(2)      <---------WOX13(1)     <---------TOE1(3)                        <---------HSFB2a(2)   <---------HSFB2a(1)   --------->ATHB12<---------MYB52(1)    ----------->GT1 --------->HSFC1(2) --------->ARR11(3)     <---------YAB1 <---------ANAC58 --------->TGA1a        --------->HSFB2a(1) <---------ARR11(3)   <----------DOF2  <---------ANAC58--------->MYB52(2)      <---------HSFB2a(1) ------>HSFB2a(2)     ============================================bZIP_DOF     <---------HSFC1(2)   - -----DOF2            --------------------->WRI1 <-----------GT1      <----------DOF2      <------NtERF2   tgagaactttctccttgtcgattactttgattgctacgctttcgtttgttttcacgttacgtgcgaggtaaactttagcgaaggtaccatggccgagaag  10290500                     <------ZmHOX2a(1)                   <---------TOE2(2)                   --------->LBD16           <---------ARR14(2)                               <---------O2           <-----------ARR10                                --------->TGA1a           --------->ARR14(2)                               --------->O2        <---------ANAC55(2)                 <-----------------AG        <---------ANAC46                    <-----------------AGL1        <---------ANAC58            <---------At4g35610<---------DOF5.7(2)        <---------ANAC58      <----------DOF2       --------->ANAC55(2)        --------->ANAC55(2)   ========================================bZIP_DOF ---->HSFC1(2)     <---------TOE1(2)--------->At4g35610--------->MYB52(1) -----HSFC1(2)    <-----------RAV1(2)  <---------At4g35610  <---------TGA1a             --------->YAB1 ---->At4g35610   <---------LBD16 --------->ZAT18  <---------TOE2(3)              ------>NtERF2 --->GLK1(2) <---------ANAC58<---------ANAC58      --------->MYB59                --------->LBD16 ------ARR10 <---------ANAC58<---------ANAC58   ======================bZIP_DOF   --------->ANAC46 ------->P<---------CCA1(2)--------->ARR11(3)   <----------DOF2                 <---------LBD16   cttacccatttcgtatcgtcccaggattagagcttgtgggctgcttctctctttaggtaacgacgtctctctcgtgattttctccgccattgatgaagaa  10290600                                                                                            <--------                                                                                    --------->GLK1(1)                                                                               ----------->GT1                                                                           --------->DAG2  <---------ARR14(2)                                                                           <---------AtMYB61---------                       --------->AHL20(2)         <---------ARR14(2)     ---------->DOF2   <---------GLK1(2)                 <---------MYB59      <----------DOF2     --------->At4g35610 --------->ALFIN1 <-----       <----------DOF2 <---------AHL20(2)         --------->ARR14(2)    <------ZmHOX2a(1)  --------->ARR14(2)   agtttgagtcttttttggaccaaaattaaaaagtttgagtcttttttttagggatttggaagatgaattgaagaggaaaggtggagaaatcgagattctg  10290700                 --------->ARR11(3)                 <---------ARR11(3)          --------->ANAC58                    <---------MYB46(3)       --------->ZAT2                         --------->MYB52(2)                                 ----       <---------ZAT2                        <---------TOE1(2)                       --------->HSFB2a(2) -ARR14(2)--------->ANAC58                  <---------MYB52(1)           <---------ANAC46     >>>>>>> >GLK1(2)--------->ZAT18        <---------At4g35610          ------>ZmHOX2a(1)       <---------HSFB2a(2) ----HSFB2a(2) --------->ICU4   ----------->RAV1(2)  ------->TEIL        ----------->GT1   >>>>>>>>>TBF1   ggcgagacgagctcgcaaagatttcgaatttctcacctgttgattcgtttgtttgaatctctcctctctctcgttttgtgaaattttgtagaagaagaag  10290800                                                                                   <---------ANAC46                                                                                  <------NtERF2    <-                                                                                 ------>NtERF2     --                                            <---------------AGL15               --------->DEAR3(1)<--                                            --------------->AGL15               <---------DEAR3(1)<--                                           ----------------->AGL2         <---------ICU4          ---                                         --------->ZAT6                   -------->HAHB4          ---                        --------------->AGL15                             --------->YAB1 <---------AHL20(2)         <---------HSFB2a(1)          --------->YAB1                     --------->ICU4 <---------AHL20(1)    >>>>>>>>>TBF1       <---------------AGL15                            <---------YAB1 <---------ARR11(3) ------>DOF2            ====================================MADS_MADS  --------->YAB1   --------->ARR11(3) >>TBF1  --------->HSFB2a(1)         <-------TEIL            *TSS     <---------YAB1   <---------CCA1(2)   aaagaagaagaaggtttctctctctactgtttttagagattcatcactaaaaatagcatttggcctctgtttataataatcgtcgccgtatatatttggg  10290900                                                                                           <---------ARR14(2)                                                                                           --------->ARR14(2)                                                                                  <---------AHL20(2)            ------->TEIL                                                         <---------AHL20(2)         <---------YAB1                                                       <---------AHL20(2)    <----------DOF2       --------->HSFB2a(2)                           <----------DOF2    <---------ARR11(3) --------KAN4(1)          <---------HSFB2a(2)                           <---------DAG2     --------->ARR11(3) ------->KAN4(1)      <-----------TBP                             --------->YAB1 --------->AHL20(2) -------ARR14(2)  <---------ANAC46                                ----------->GT1--------->AHL20(1) -------KAN4(2)   <---------ANAC58   <---------DAG2       --------->HSFB2a(2)<---------AHL20(2) ------>ARR14(2)  <---------ANAC58   <----------DOF2      <---------HSFB2a(2)--------->AHL20(2) ------->TaMYB80<---------ANAC46  <-----------GT1      <---------YAB1<-----------GT1      <------ZmHOX2a(1)   aatatgcttttatgaattttgtgtgtttatagaaaataacttttttttttgttaatggttatagaaaatagtaactttataaatttaatgcaggattttg  10291000                                                     <---------ANAC58                                                     <---------ANAC55(2)                                                     --------->ANAC55(2)                                                     <---------ANAC58                                                <--------ATHB1                                                <---------ICU4                                                --------->ATHB12                                               --------->ICU4      --------->ARR11(3)                       <---------ATHB12     ------>NtERF2      <---------ARR11(3)                       <---------YAB1      --------->LBD16     --------->YAB1                     <---------ANAC58  <---------ICU4   <---------TOE2(3)                    <---------ANAC58 <---------YAB1        <---------AHL20(2)---- <---------AHL20(2)           --------->MYB52(1)--------->YAB1 <-----------GT1 --------->AHL20(2)<---   tgtttaatgatattcttaagtactgtattgactaacaaaatgggttgcaatgattacttatcatttctcccgacgatatatataatttgtttcaaaaatt  10291100                                                                             <-------MYC3                                                                             ------->MYC3                                                                            --------->ANAC46                                                                            <---------ANAC46                                                                            --------->ANAC55(2)                                                                            <---------ANAC55(2)                                       <---------AHL20(2)            <---------YAB1                                      <---------AHL20(2)           --------->YAB1----------->GT1                                   --------->AHL20(2)             <------ZmHOX2a(2)                                   --------->AHL20(1)            --------->ARR11(3)<---------ARR11(3)                                   <---------AHL20(2)            <---------ARR11(3)--------->ARR11(3)                               <---------AHL20(2)          --------->ANAC58 <---------TGA1a                               --------->AHL20(2)          --------->ANAC58 --------->O2                            --------->YAB1          --------------->AGL15   <---------O2           <- ----->AHL20(2)            <---------YAB1           <---------------AGL15   --------->TGA1a        -- ------AHL20(2)--------->YAB1 <---------YAB1       --------->ANAC55(2)<---------ICU4              <--   taaataagttgaaacaattacaacttgctattataaattttttatttggacttacatattcaagtaagatcatcattcacgtgaagataatacaagttta  10291200                                                                                    --------->SPL7                                                                                 ------->GAMYB                                                                               -------->P                                                                               ------>MYB46(1)                                                                               ------>MYB83                --------->AHL20(2)                   <---------ANAC58         --------->MYB52(1)                <---------AHL20(2)               --------->At4g35610          --------->MYB55(1)          --------->YAB1                     --------->MYB52(2)              --------->MYB46(3)          --------->TOE2(3)            <---------ANAC58                      --------->AtMYB61 --------->At4g35610                   <---------ANAC46                     <---------MYB55(2) --------ICU4   --------->ATHB51       <---------ANAC58                     --------->MYB46(3) ------->YAB1   <---------ICU4  <---------AHL20(2)   <---------ANAC46       --------->DEAR3(2) -------ATHB12 --------->ICU4   --------->AHL20(2)   <---------ANAC58 <-----------GT1           <----   atcatctctcaatgttaattatttcaacttgtatttaaattccttgttatttgctgcgtgtattttgggttttttcgaaccaaccgtatgtcagtatttg  10291300                      <-----------GT1                  <---------AHL20(2)                  --------->AHL20(2)     --------->ARR14(2)                 ----------->GT1                  --------->YAB1         <---------ARR14(2)        --------->ANAC46            ------->TEIL         <---------MYB46(3)          --------->AHL20(2)   <----------DOF2 <-- -------HVH21    <---------ATHB12--------->MYB52(2)       --------->YAB1    --------->YAB1    <------   tcatgcctcttatgcaccaattatataccacttgtttgttacaaatactcaaaaacaaaaacataatataagtcactatcgtaactttgttttgctataa  10291400  Previous    Next  AGI:  At4g18700.1    Description:  CIPK12 (SNF1-RELATED PROTEIN KINASE 3.9); kinase. similar to CIPK19 (SNF1-RELATED PROTEIN KINASE 3.5), kinase [Arabidopsis thaliana] (TAIR:AT5G45810.1); similar to putative serine-threonine kinase [Gossypium hirsutum] (GB:AAT64036.1); similar to CBL-interacting protein kinase 19 [Populus trichocarpa] (GB:ABJ91226.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN63583.1); contains InterPro domain NAF; (InterPro:IPR004041); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009 Range:  from: 10288809    to: 10290861    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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