Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          ----------->HVH21      ----------->RAV1(2)      <---------ZAT2      <---------At4g35610     --------->MYB52(1)     ------>MYB83     ------>MYB46(1)     -------->P    <---------ALFIN1                                                                <---------At4g35610   <---------MYB59                                                     ------>ZmHOX2a(1)           --   --------->MYB46(3)                                             <---------At4g35610             --- <---------TCP20                  <---------AHL20(2)              <---------ZAT2    ----------->RAV1(2) --------->PCF2                   --------->AHL20(2)              --------->ZAT2    --------->At4g35610 <---------TCP15(1)  <---------CCA1(2)                            --------->At4g35610             --- ------RAV1(1)     <---------ALFIN1                         --------->ZAT6   <---------ARR11(3)   ---   ttggacccacctgataccgctccatctctctctcaattttttgctcatcgaacttggtcttaactctcagctcctccaatttcttcacctgagcctccac  10265100                                ------>MYB46(1)                                ------>MYB83                              --------->AtMYB61                              ------->GAMYB                                                        --                             --------->MYB46(3)                                                    --                            -------->P           <---------MYB46(3)                      ----------->GT1   <---------ALFIN1        <-----------GT1       <---------DEAR3(2)                  --------->MYB52(1) ------->MYB46(3)          --------->WOX13(1) ------------>AtMYB77                  ----------->HVH21 ------>ANAC46           <---------ATHB12    ----------->HVH21              <---------ATHB12       -- ------>ANAC58   ------>ZmHOX2a(1) --------->LBD16                         --------->ANAC58      <--- ------>ANAC58  --------->TOE2(3) --------->ANAC46          --------->LBD16--------->ANAC58   <------   aagcaccactctcgacttcctcagcctatcaaccatccgaaacaccatcgacggtttccatccggttaaccaagagcaagcattctctaacgggtttaac  10265200        --------->LBD16       ----------->GT1      ------>ZmHOX2a(2)                                                             --------->HSFB2a(2)    --------->ARR14(2)                                                              <---------HSFB2a(2)    <---------ARR14(2)                                                         --------->At4g35610 ---->MYB46(1)                                                         --------->ALFIN1             < ---->MYB83            --------->ARR11(3)                            <---------ANAC46  <---------ARR11(3) ------->MYB52(1)      <---------ARR11(3)                            <---------bZIP60(2)<------ZmHOX2a(2) ------MYB59 --------->DAG2                                   <----------DOF2  <---------At4g35610  - -----GT1   ---------->DOF2            ------>NtERF2   --------->YAB1<xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)   caaactgatccgaaaaaagctaagacatcttctcttatggctgcccatttggctgtataataagctttgtgatgtgtagttagcttcgagatcaaatgtc  10265300                                                     --------->CCA1(2)                                       ---------->DOF2                                     <---------AHL20(2)                         <---------YAB1                       <---------YAB1--------->AHL20(2)                    ------>MYB46(1)             --------->YAB1  <---------YAB1         <---------ARR11(3)     ------>MYB83           <-- ---------ZAT2      <---------YAB1   --------->YAB1 <---------ARR14(2)   <---------MYB59          <-- -------->ZAT2    <---------ZAT6  --------->WOX13(1)--------->ARR11(3)<-----------GT1         <------ZmHOX2a(1)   gaagctcggtctcactcatagtgttattgttatgagcaattaaaagttgatgaagatatagctcaagttgaataacccaactctcatagaactctaggaa  10265400                                                                                   ------>MYB83                                                                                   ------>MYB46(1)                                                  *TSS                           --------->TOE2(2)          <---------TOE1(2)       ----------->GT1----------->GT1                 --------->TOE1(2) --------DOF2                     <---------MYB46(3)                          <-----------GT1 -------DAG2                 <---------YAB1    ---------->DOF2      ------------>CBF                -   cttttcttctactaggtttctcattttgctcattagtggttatattctataaagaaaattagcattttggaacaatatttatacctacgtctatcgatat  10265500                                 <---------AtLEC2                                 --------->YAB1                             <---------ANAC58                          ------->PIF5                          <-------PIF5                     <<<<<<<<<GATA-1                         --------->ZAT2                 <---------AHL20(2)                         <---------ZAT2              <---------ICU4                         --------->At4g35610         <--------ATHB1--------->AHL20(1)                       <-----------RAV1(2)           --------->ATHB51                      <---------LBD16                <---------AHL20(2)                  --------->ARR14(2)                 --------->AHL20(2) <---------LBD16                  <---------ARR14(2)                --------->ICU4 <---------AHL20(1)                 <---------GLK1(1)                --------->YAB1   <---------AHL20(2)                 <---------CCA1(2)                <---------ICU4   --------->AHL20(2)          ------          --------->ARR14(2) <---------ANAC58    --------->ICU4    --------->ARR11(3)         -------          <---------ARR14(2) <---------AtLEC2    <---------YAB1 --------->AHL20(2)            ------>MYB83 ------------>CBF<----------TaMYB80   <---------YAB1<---------YAB1 <---------ARR11(3)    <-----------GT1 -------->ANAC46------->TEIL<-------TEIL       --------->YAB1   --------->YAB1 ----------->GT1------>MYB46(1)   atacacaatgcatatatgtatatccccaggtgcatgcatgatgtttctgtaataataatttatctataatatatttcggaatggttttatattaccaact  10265600       --------->ANAC58       --------->ANAC58                                                                            --       --------->ANAC55(2)                                                                         <-       --------->ANAC46                                                                           ---      <---------LBD16                                                                        --------  <---------------AtSPL3                                                <---------YAB1       -------- <----------DOF2--------------->AGL15                                <---------YAB1 <---------ARR11(3) <------------------SPL14                                          <---------AHL20(2)        <------- --->ZAT6    --------->MYB52(1)            <---------ZAT6         --------->ICU4---------->DOF2<----- ->P<---------SPL7              ------->TEIL                      --------->AHL20(2)--------->ARR11(3)   ctactttgtacggaataacgaaatatagaaaatgaatcaatagtagagttgaaatggtcgaacacatatttattattaaaccgaaagaacttaatatgta  10265700       <------MYB83       <------MYB46(1)  --------->ATHB12 <---------YAB1 ------->YAB1 --------ICU4 ------>ICU4          <---------ANAC58                                                            --- --->GT1              <---------ANAC58                      <------MYB46(1)               <---------- ->ANAC55(2)     <---------ICU4                       <---------AHL20(2)               <---------ANAC55(2) --ANAC55(2)   ------>MYB83                         <----------DOF2    <-----------GT1 --------->ANAC55(2) ----AHL20(2)  ------>MYB46(1)                 ------->TEIL <------MYB83       <---------YAB1<-------   attatcatttggtcaccaaatattgcttaacatgagttttgaaattttgaatctcttttatttggtttttttttttctgttttgattttaagtaaccttt  10265800                                     --------->AHL20(2)                                     <---------AHL20(2)                                    --------->ICU4                      <---------AHL20(2)                      --------->AHL20(2)                     --------->AHL20(2)   <---------ANAC55(2)       --------------->AGL15        <---------YAB1      <-----------------AGL1      <--------HAHB4      ----------------->AGL2      --------->YAB1      <-----------------AGL2      <--------ATHB1      ----------------->AGL1      --------->ATHB51      ----------------->AGL3      <---------ICU4                                               ------ --------------->AtSPL8          <---------ATHB12 <------MYB46(1)                         <---------ARR14(2) <---------------AtSPL8  ---------->DOF2  --------->ANAC55(2)                             --------->ARR14(2) ------->DOF2----------->GT1     --------->ICU4   <------MYB83    --------------->AtSPL8  <---------GLK1(2) -GT1 <-----------------AG       <---------ATHB51--------->MYB59  <---------------AtSPL8----------->ARR10 --DAG2<---------------AGL15     --------->AHL20(2)     ----------->GT1            --------->ICU4   taaagggtaccagtttgggaaaatttaaaaagacaataattaatatgtgatttggtattcgtaaaattcttgtacaattcttgtactaatcagatactca  10265900                                <-------GAMYB                                <---------ANAC58                                <---------ANAC58                               <------MYB46(1)                               <------MYB83                              <---------MYB46(3)                              --------->MYB55(2)                             --------->ALFIN1                             <--------P   --------->TOE1(3)                             <---------MYB55(1)                            <xxxxxxxxxxxxxxxxsmallRNA(i)                            <---------MYB52(1)      <---------AHL20(2)   <---------DEAR3(2)                                                     xxx     --------->AHL20(2)   --------->MYB55(2)                                                    <----    <---------YAB1        <---------MYB46(3)                                                    ----- --------->AHL20(2)       <---------DEAR3(1)                        --------->YAB1              <---- <---------AHL20(2)       <---------DREB2C(2)      --------->AHL20(2)        <----------DOF2   <----- <---------AHL20(1)      <---------ANAC46 --------->TOE2(3)  <---------ARR11(3)          --------->AHL20(2) --------->AHL20(1)      <---------ORA47(1)        <---------AHL20(2)   ---------->DOF2  <---------AHL20(2) --->YAB1        xxxxxxxxxxxxxxxx>smallRNA(i)--------->AHL20(2)  ------>ZmHOX2a(1)      --------->AHL20(2)   tattttattatatgctaagtcactatggccggtgggttgtcttcccttaaaattttaatacaaaatcctatcaaaaaagctttaaaaaaaaaaaatttga  10266000  Previous    Next  AGI:  At4g18650.1    Description:  transcription factor-related. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G14880.2); similar to predicted protein [Gossypium hirsutum] (GB:AAT64037.1) Range:  from: 10263980    to: 10265450    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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