Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 <---------AHL20(2)                       ----------->GT1            --------->YAB1               --------->AHL20(2)                       --------->YAB1           --------->AHL20(2)      <---------WOX13(1)                    --------->YAB1             --------->YAB1         --------->ATHB12 -----GT1         --------->AHL20(2)      --------->AHL20(2)         <---------YAB1 -->MYB52(1)     --------->YAB1--------->YAB1 --------->AHL20(2)   <-----------GT1                 --   agagcattcacattatctaaaataatagtaaaatcaaaataaaactaaataaaaataactctggttttataacgattgattttaaatattagtttttgtt  10250300                                                                <---------ANAC58                                                                <---------ANAC46       --------->AHL20(2)                                           --------->ANAC55(2)  ----------->GT1  --------->ANAC58          --------->AHL20(2)               <---------ANAC55(2)  <---------ANAC58 --------->ANAC58         <---------YAB1       <---------YAB1               --------->YAB1      --------->CCA1(2)       <---------ICU4        --------->AHL20(2)      ----------->GT1         --------->YAB1       --------->YAB1        <---------AHL20(2)     <---------AHL20(2)      <---------TOE2(3)      <---------ATHB12    --------->AHL20(1)   <---------ARR11(3)     --------->AHL20(2)    ---------      --------->ICU4      <---------AHL20(1)   --------->ARR11(3)     <---------AHL20(2)<-----------GT1 -------->DOF2           --------->ICU4   <-------TEIL    <---------YAB1  --------------->AGL15   ---   gtaaagaaatcattatatatgtctgtaatatttttatactgagttacatgatatttagttattatagcgtaattaactaagataagaaattaactaaagt  10250400                                  <---------ANAC58                                  <---------ANAC46               <---------AHL20(1) <---------ANAC58               <---------AHL20(2)--------->SPL7             <---------YAB1      ------->TEIL           <---------ICU4        <-----------------------TaNAC69(2)                <---------ICU4           --------->YAB1        <-------TEIL                                      <---------------AGL15          --------->ICU4      --------->ANAC55(2)                                  --------------->AGL15          <---------YAB1      <---------ANAC55(2)                                 ----------------->AGL3        <---------ICU4        --------->ANAC58                                    ----------------->AGL2       <---------YAB1        --------------->AtSPL3                               <-----------------AGL1    <---------YAB1        <------ZmHOX2a(1)                             --------->YAB1   --------->HSFB2a(2) --------->GLK1(2)      --------->MYB59                                <---------YAB1    <---------HSFB2a(2) ->DOF2--------->ICU4 <<<<<<<<<MYB98 ----------->GT1               ----------->GT1----------------->AGL1 ------>ARR11(3)<---------YAB1--------->ANAC58   --------->ZAT6 --------->MYB52(1)<-----------------AGL3   gatattctgattattattatttttgttaggacacgtacgtggaaaaactaaacactataggttacaaaacggtataataaactcaccattactggaaaat  10250500                                                                          <---------YAB1                                                                         <---------AHL20(2)                                                                        --------->AHL20(2)                                                                        <---------AHL20(2)                                                                       <---------AHL20(1)                                                                       <---------AHL20(2)                                                                       --------->AHL20(2)                                                                    <---------AHL20(2)                                                                    --------->AHL20(1)                                                                    <---------AHL20(1)                          --------->YAB1                            --------->AHL20(2)                         <---------YAB1                            <---------AHL20(2)                <---------ANAC55(2)                                --------->AHL20(2)            ----                --------->ANAC55(2)                          --------->TOE2(3)       <---------AtLEC2                ----------->GT1                            --------->GLK1(2)       <---------ANAC46              <---------ATHB12                             --------->ICU4--------->AHL20(1)    <-----   gtttgcatttgactcaataagtaacttattataagttactgatataatgcatagttttgaaattcttaaataaattattttggtttcgcatgaaaatatg  10250600                                             <---------ICU4                                             --------->YAB1                          ----------->TBP   <---------ATHB12                  <-----------HVH21         --------->ICU4               <------------CBF    <-------TEIL              --------->ATHB51--------->AHL20(2)          <---------AHL20(2)  ----------->TBP<--------HAHB4 <--------ATHB1          --------->AHL20(2)  <---------AHL20(2)     <---------ANAC58                      <---------ARR11(3)          <---------AHL20(1)--------->AHL20(2)       <---------ANAC58           --------->ATHB51 ------>DOF2 <---------YAB1 ----------->TBP <---------YAB1  <---------ICU4      <---------ICU4 ----YAB1 --------->AHL20(1)<---------AHL20(2)       <---------ANAC46          <---------MYB52(1) <--   aaaggagagaaatttattattgtcacttatatatatatacatcgtaatcattttttcgtgaataattctctctcccattccattatttctcagtatctct  10250700                       <----------DOF2                      <---------ANAC46                      <---------ANAC58                    <---------AHL20(2)                        -            <----------DOF2    --------->TOE2(3)         --------->AHL20(2)                         <            <---------DAG2  <-----------GT1            <---------AHL20(1)                          --         *TSS         <---------ANAC58                 --------->AHL20(1)                        ----        <---------MYB52(1) <-----------GT1            --------->AHL20(2)                 <---------GLK1(1)  <----------DOF2<-----------RAV1(1)                ------>MYB83                         --------->GLK1(1) --------DOF2   <---------YAB1 --------->TOE1(3)    ------>MYB46(1)                  --------->YAB1<-   ctttctttcccttactttattgttgcttttaaaccttcaatttgctcataaaccaaatatataatatcaaaacaaacaaacaaaaaatcagaattcccct  10250800                                         <---------ARR14(2)                                         --------->ARR14(2)                                       --------->LBD16                                   <---------ALFIN1                                 --------->CCA1(2)                     --------->ANAC46                                 <------ZmHOX2a(2)                     --------->ANAC58                                 ================================HOX2a_HOX2a                                --------->ARR11(3)                     --------->ANAC58                            ---------->DOF2                        --------->AtMYB61                <                          --------->ANAC58<------ZmHOX2a(2)      ----------->RAV1(1)                -                          --------->ANAC58=======================HOX2a_HOX2a                       --                    <---------ALFIN1 <---------LBD16            --------->AtMYB61                ----            <------ZmHOX2a(2)   --------->AGP1                  ------->GAMYB                   <----           <---------ARR14(2)   <---------ARR11(3)             <---------MYB111(2)              -----       <---------LBD16 --------->DEAR3(1)<-----------ARR10     --------->MYB46(3)           ---------   --------->ARR11(3) --------->DEAR3(2)<---------ARR14(1)     <---------MYB55(2)           ------->GAMYB -------->YAB1      --------->ANAC46--------->MYB52(1)        ------>MYB46(1)              --------->MYB46(3) ---------ICU4<-----------HVH21 --------->ARR14(2)            -------->P     <---------ALFIN1-------- ------->ICU4------>ZmHOX2a(2)  <---------ARR14(2)            ------>MYB83  --------->MYB46(3)  ----- ----->YAB1--------->ARR14(2) --------->HSFB2a(1)           <---------MYB111(2)     ------>ZmHOX2a(1) --------ATHB12   <---------ALFIN1--------->MYB46(3)      ------>ZmHOX2a(1)-------->P  ------>ZmHOX2a(1)   aataatgtcttcggatcgtcacacaccgacgaaagatccaccggatcatccgtcttcttcctccaaccaccacaagcaaccacttcctcctcaaccgcag  10250900       --------->At4g35610       <---------At4g35610       ------>NtERF2       <---------ZAT2           ----------->HVH21   --------->ANAC46        --------->ANAC58 --------->AtMYB61         --------->ANAC58 ---------MYB55(2)         --------->ANAC46 -------->MYB46(3)       ---------->DOF2 <---------ALFIN1             --------->ARR14(2) ------>P     <---------YAB1   <------NtERF2                          <---------ARR14(2) ----->MYB46(3)         --------->ARR14(2)  ------->MYC3             XXXXXXXXXXXXXXXXXXX>MIR866-3P -----At4g35610         <---------ARR14(2)  <-------MYC3           XXXXXXXXXXXXXXXXXXXX>MIR397B ---->At4g35610  ------->TEIL  ------>NtERF2<-------MYC2 --------->TOE2(3)                          < >ANAC46 --------->RAP2.3(2)   --------->LBD16<-------TEIL  ---------->DOF2   <---------MYB52(1)    < ->LBD16 --------->RAP2.6(2)  --------->DEAR3(1)         <---------MYB59     <-------GAMYB          - ---->ZAT2<---------RAP2.6(3)<---------LBD16------->MYC2<---------ANAC55(2)  ========================   caaccactcagccgctatgaatcgcagaaacgccgcgactggaacacgttcgtccaatacctaaaatcacaaaatccaccgttgatgatgtctcaattcg  10251000        ------->MYC3        <-------MYC3        <-------PIF4        ------->PIF4                                                                               --        <-------MYC4                                                                               <-        ------->PIF5                                                                        ---------        <-------MYC2                                                                        =========        ------->MYC4                                                                        ------>ZmHOX2a(2)        ------->MYC2                                                                       ==========        <-------PIF5                                                                       <------ZmHOX2a(2)       <---------TGA1a                                                                    <---------ARR14(2)       --------->TGA1a                                                                    --------->ARR14(2)      ------------>OsbHLH66                                                               <---------TCP16(1)      ------->TEIL                                                                        <---------TCP20     <---------ALFIN1                                                                    <---------ARR14(1)     <------------OsbHLH66                        ---------->DOF2                       --------->LBD16   --------->ANAC58                      <------MYB83                                  ------->GAMYB   --------->ANAC58               <------ZmHOX2a(2)                                    ==============   --------->ANAC46    <---------TOE2(3) <------MYB46(1)                              <---------LBD16 ---------ZAT14        <---------TOE1(3)--------->MYB59                              --------->MYB52(1) ---------REM1(2)    ====================HOX2a_HOX2a   <-------TEIL           <---------LBD16      <- -------->ZAT14      ------>ZmHOX2a(1)<---------MYB52(1)          <---------ANAC58 --------->MYB46(3) ================MYC_MYB   <-------TEIL --------->MYB46(2)        <---------ANAC58--------->SPL7  ---   actacacgcacgtgctaagtttcctaaggtacttagatcagtttggtaagaccaaagtacatcatcaagcttgtgtcttcttcggacaaccggatccacc  10251100         <-------MYC4         <-------PIF5         ------->MYC4         ------->MYC2         ------->PIF5         <-------MYC2         <-------PIF4         ------->PIF4         <-------MYC3         ------->MYC3        --------->O2        ================================================bZIP_DOF        <---------O2        --------->ANAC55(2)                                                                   -------        --------->TGA1a                                                                       <------        <---------TGA1a                                                                       <------       ------->TEIL                                                                         <--------       ------------>OsbHLH66                                                            --------->LBD16      <------------OsbHLH66                                                            <---------ANAC46     <---------ZAT18                                                                   <---------ANAC58     --------->ZAT14                                                                   <---------ANAC58     <---------ZAT14                                                                  --------->ATERF1(1)  <---------ANAC46                                                                    <------NtERF2  <---------ANAC58                                                      <---------ANAC46<---------MYB46(3)  <---------ANAC58                                              <---------At4g35610  ------>NtERF2 <-------TEIL                                                   --------->At4g35610  <---------MYB46(3) <---------DEAR3(1)                                    <---------DEAR3(1)   <------ZmHOX2a(1) ------- ------->ARR14(2)                                     --------->SPL7<---------ANAC58<---------DEAR3(1) --------ARR14(2)                                     --------->RAP2.6(3) --------->ANAC46<---------- >MYB46(3)                    <---------HSFB2a(2)   ----------->HVH21   <---------TOE1(1) <---------PCF2 =====================HOX2a_HOX2a                   <---------SPL7 --------->At4g35610<---------LBD16 =====================HOX2a_HOX2a                  ================================HOX2a_HOX2a------- =================MYC_MYB     --------->HSFB2a(2)  ------>ZmHOX2a(2)<---------ANAC58--------->ALFIN1 ----------HVH21         --------->ZAT2           <---------------AtSPL3<---------TOE2(1)<------NtERF2 ------>ZAT2   ------>ZmHOX2a(1)             <----------DOF2 ----------->ARR10     <-----------HVH21   aggtccgtgcacgtgtcctctcaaacaagcttggggaagcctagatgctttgatcggacggctaagagctgcttacgaggaacacggtggcgggtcacct  10251200  Previous    Next  AGI:  At4g18610.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G42610.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G42610.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN72178.1); similar to unknown [Populus trichocarpa] (GB:ABK93578.1); contains InterPro domain Protein of unknown function DUF640 (InterPro:IPR006936) Range:  from: 10250709    to: 10251553    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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