Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                      --------->MYB52(1)                                                            --------->ZAT2                                                            <---------ZAT2                                  --------->TOE2(3)         --------->At4g35610                     <---------At5g28300                --------->ANAC46              <-------GAMYB--------->TOE2(3) <---------ATHB12    --------->YAB1          <---------AHL20(2) ------AHL20(2)     <-----------GT1     --------->TOE2(3)   <---------At4g35610 <---------YAB1 ----->AHL20(2)<---------MYB52(1) <---------DAG2--------->ZAT6  <---------YAB1<-----------GT1 ---->YAB1   ----------->GT1      --------->TOE1(3) <-----------HVH21 <------------MYB.PH3(1)   ttaatgtcactaatgctgttatttaccattcttaaaccttatcgtcaataactctatcacccagctatcataacagtttattaccatacattttttttgg  10230800                                                                            <---------ICU4                                                                            --------->ATHB12                                                                  --------->ATHB51                                                                  <---------ICU4                                                                 <---------YAB1                                            --------->ANAC46    --------->AHL20(1)                                          <-----------GT1       --------->AHL20(2)                                       <---------ICU4           <---------AHL20(1)                                      --------->ICU4            <---------AHL20(2)                                    =================================================================        <-----------GT1             --------------->AGL15      --------->YAB1           <-----------GT1       <---------YAB1            <-----------GT1            --------->YAB1 --------->ICU4        <---  ----------->GT1             --------->ATHB12      --------->AHL20(2)     <---------YAB1 <----------   aaacgagttattacaaatttcttcgaatcgagttattgccatttttacgaaaaataaaacaaaaattataattgctcatgatttcatatttttctatata  10230900                                       ------->GAMYB                                              ---                          --------->ARR14(2)                                                  -------                          <---------ARR14(2)                                         --------->ANAC58                         <---------GLK1(1)                                     ---------->DOF2------- =======MADS_MADS        --------->GLK1(1)       ---------->DOF2  ---------->DOF2    --------->ANAC58 ------YAB1  --------->MYB46(3)      --------->At4g35610 <---------TOE2(3)    --------->AtMYB61  ---- -------AGL3>>>>>>>>>>>>>>>>>LFY    --------->MYB52(1) ---------->DOF2 ---------->DOF2   ---------->DOF2   tgattctatggtctaaccattgtcagcatttccgaacacaactgaaattgtcaaagacaaaggtaatctaaagaaaagaaccaaagcactccaaagcctt  10231000                                                                --------------->AtSPL8                                                                <---------------AtSPL8       --------                                                       ------>ZmHOX2a(1)        <---------ALFIN1-----                                                  --------->KAN4(2)            --------->ZAT14  -----                                                 <---------HSFB2a(1)           <---------ZAT14  <----      <----------DOF2                            <---------HSFC1(2) <---------ZAT18   ------->TEIL ------>DAG2                                     --------->HSFC1(2) --------->ZAT14 --------->ZAT14 -->TOE1(3)                                      --------->HSFB2a(1)<---------ZAT14 <---------ZAT18 -->TOE2(3)<----------DOF2                       --------->KAN4(1)  --------->ZAT18 <---------ZAT14 ------>DOF2                 ------->TEIL        <---------KAN4(1)--------->ZAT14 --------------->AtSPL8   aaagtgttctttactttggttttaaaatttgaatctaaaatgaacagaagaacgttcctcgttatatgtgtacactctctcaacactgtacttaaaaata  10231100           <---------ZAT18           <---------ZAT14      <---------ZAT14                                     ----------->GT1  --------->DAG2                                <-----------GT1    --------->TOE1(3) ---------->DOF2                             <---------YAB1    ---------->DOF2                  ----- ->YAB1    --------->ZAT14         <---------REM1(1)   ------->GAMYB                           <----- ---->AHL20(2)                 <---------------AGL15  --------->MYB46(3)           ------------>CBF ---->AHL20(1)                 --------------->AGL15--------->MYB52(1)---------->DOF2     <----------DOF2 -----AHL20(2)        --------->AHL20(2)<------ZmHOX2a(1) <---------ETT(2)       <-----------GT1<----   aaataaagcacagtgtagtttcaatttcatatgctaaatgtaggattatttttccaacggtcgaaaaaagcttaaagcatttttaaccaattctttattt  10231200                             *TSS                             <---------AHL20(2)        <---------ICU4       <---------YAB1                                                     ----- ---->AHL20(2)              <---------AHL20(2)                                           <---------YAB1 ----AHL20(2)         --------->YAB1                                                   --------->YAB1 -----AHL20(2)    <----------DOF2<-----------GT1                    ---------->DOF2    <---------ICU4   attttttaaaacattacaaacttttcatatttttattactctctcaagtagtctcatcttcttcttaatccaaaggcccaaactttgaatcatcactatc  10231300                                                                 <---------ARR14(2)                                                                 --------->ARR14(2)                                         ------->GAMYB           <-----------ARR10                                     <---------WRKY38(1)     >>>>>>>>>>FUS3                                     <---------WRKY12        >>>>>>>>>>ABI3                                 --------->ANAC58           --------->ANAC58                                 --------->ANAC58           --------->ANAC58                              --------->ZAT14               --------->AtLEC2                              <---------ZAT14               --------->ANAC46                              --------->ZAT18          <-----------GT1                  --------->ICU4                          <---------ARR11(3)       <---------AHL20(2)              --------->ANAC58                          --------->ARR14(2)       --------->AHL20(2)    <----------DOF2<---------YAB1 ---->ZAT6                <---------ARR14(2)    <----------DOF2 <---------CCA1(2)  --------->ANAC58 -   actctctctctctctctctatctctcaagaactgcacggacaacgacatgcttttaatttccatgcaaatctctcctttcttctcaagtcatttttgaaa  10231400                                                                <---------ANAC46                                                                <---------ANAC58                                                                <---------ANAC58                                                               <-------TEIL                                                            <---------HSFB2a(1)                                                           <---------TOE1(3)                                                           <---------TOE2(3)                                                           --------->MYB59                                                           --------->DAG2                                                       <------MYB83                                                      <---------MYB46(3)                                                     <---------ANAC46                                                     <---------ANAC58                                                     <---------ANAC58                                                   --------->MYB55(2)                                  --------->WOX13(1)<------NtERF2                                <---------YAB1     <---------MYB46(3)   --------->YAB1             --------->YAB1      <---------RAP2.6(2)  <---------ATHB12         <----------DOF2 <---------YAB1<--------P                      <-----------GT1 -------->WOX13(1)   --------->ALFIN1    --------->YAB1<------MYB46(1)            <-----------GT1   atcaatcaaaaaactgaaacttggtggagcttttatcattcactcatcaatggtggctggtaaggttcgtgtaacaatgggttttcacaaatcaccttct  10231500                                                     ------>ZmHOX2a(1)                                                  ------>ZmHOX2a(1)                                                 <---------ALFIN1                                               ------>ZmHOX2a(1)                                              <---------ALFIN1                                            ------>ZmHOX2a(1)                                 -------                                           <---------ALFIN1     <---------ALFIN1 <---------At4g35610                                           <xxxxxxxxxxxxxxxxsmallRNA(se3)    <---------ARR14(2)                                        <xxxxxxxxxxxxxxxxsmallRNA(se3)       --------->ARR14(2)------                                      ------>ZmHOX2a(1)<---------ALFIN1  <---------LBD16     <-------                          <----------DOF2------>ZmHOX2a(1)     --------->MYB46(3)--------->LBD16         ---------->DOF2  <---------DAG2<---------ALFIN1    ---------->DOF2--------->LBD16   --------   actaaaaaaaccaaagacatgccttctcctttacctcttcctcctcctcctcctcctccacttaaaccaccttcttccggttccgctactactaaaccac  10231600                                                           <---------At4g35610     <---------ZAT2                                                           --------->At4g35610     --------->At4g35610                                                       <---------ARR14(2)          <---------At4g35610                                                       --------->ARR14(2)         <-----------RAV1(1)                                                   ------->PIF5                 <---------ZAT2                                                   ------->MYC2                 --------->At4g35610                                                   <-------PIF5                 <---------At4g35610                                                   <-------MYC2                <-----------RAV1(1)                                                   <-------MYC3              <---------ZAT2                                                   ------->MYC3              --------->At4g35610    <                                                  <---------ALFIN1           <---------At4g35610    <                                                  --------->ANAC58          <-----------RAV1(1)     -       ------>ZmHOX2a(1)                          --------->ANAC58    --------->ANAC55(1)         --- -->AtMYB61                                       --------->ANAC46    --------->ANAC58          ----- --->MYB52(1)         <-----------GT1  ----------------------->TaNAC69(2)<---------ALFIN1      ------ --MYB55(2)     --------->LBD16<----------DOF2  <---------ALFIN1      --------->ANAC58      --------- ->MYB46(3)   <---------LBD16<----------DOF2 <-----------GT1          --------->ANAC46<---------At4g35610   cgattaatcctagtaaaccgggtttcactcgctctttcggtgtttatttcccacgcgcttccgctcaagttcacgccactgctgctgctgcttctcataa  10231700  Previous    Next  AGI:  At4g18570.1    Description:  proline-rich family protein. similar to CHUP1 (CHLOROPLAST UNUSUAL POSITIONING 1) [Arabidopsis thaliana] (TAIR:AT3G25690.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48078.1); contains domain PTHR23213 (PTHR23213); contains domain PTHR23213:SF13 (PTHR23213:SF13); contains domain SSF48452 (SSF48452) Range:  from: 10231229    to: 10234704    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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