Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100    <---------AHL20(2) <-----------GT1 ------>ATHB51 ------>AHL20(2) -------AHL20(2) -------ICU4 ------AHL20(2) ----->AHL20(2) ------AHL20(1) -->AHL20(1)           <---------AHL20(2)                                                  <--------- -->AHL20(2)         <---------AHL20(2)                                                --------->AHL20(2) ---AHL20(2)        <---------AHL20(1)                                       <---------HSFB2a(2) --AHL20(2)         --------->AHL20(1)    <-----------GT1       --------->ATHB12     --------->TOE2(3) ->AHL20(2)  ------>ZmHOX2a(1)   <---------AHL20(2) <---------ICU4           --------->HSFB2a(2)   ttatttcattccatcctcgatatatatttttgtattttttttttttacatttcaatattgcataaatgatttgatttttctataaaacataaattacttc  10226500                                                                                      --------->YAB1                                                                                     <---------ATHB12                 <-------TEIL                 --------->ANAC58                   <---------YAB1             <---------------AtSPL3           ----------->GT1                <---------GLK1(2)             --------------->AtSPL3           --------->ANAC58          --------->HSFC1(1)             <-----------------------TaNAC69(2)                         <---------HSFC1(1)             <---------------AtSPL8 --------->YAB1                      <---------HSFB2a(2)  <---------ATHB12             <---------ATHB12                         >>>>>>>ZML2--------->WOX13(1) --GT1 ----------->GT1        <---------ARR11(3)                        --------->HSFB2a(2)----------   agcaatgaccagaaaaacgtacagaattacaaaatcattcatgttgacaagaaaaaaatccatgtttctcggttctagagattatcaatcagaacgttta  10226600                                                                        --------->GLK1(2)                                                                        --------->CCA1(2)                                                                       --------->ARR11(1)                                                                       <---------ARR14(2)                                                           <-------PIF5--------->ARR14(2)                                                           ------->PIF5<---------GLK1(2)                  <-----------GT1                          --------->DEAR3(1)     --------->ARR11(3)              <---------TOE1(3)                           --------->DEAR3(2) --------->ALFIN1              <---------TOE2(3)          --------->HSFB2a(2)         ----------->ARR10            <---------AHL20(2)           <---------HSFB2a(2)--------->LBD16<---------ANAC46         -     <---------AHL20(2)   <---------ANAC46                <---------LBD16<-------TEIL   ---------->DOF2 ->GT1     <---------AHL20(2)       <----------DOF2    <---------ABI4(2)--------->ARR14(1)     ------   taagtattttttttttaatgttaccttggcgaagaagtcttttctagagtagatgctagcaccggcgaactgagattcggtgttgatattgaaagtatcg  10226700                                                                                                   --                                              ------>ZmHOX2a(2)                                    --                                             <------ZmHOX2a(2)                                     --                                            <---------ARR14(3)                                   ----                                            <---------ARR14(2)                                  <----                                            --------->AGP1                                     <-----                                            --------->ARR14(3)                                 <-----                                            --------->ARR11(3)                                 <-----                                            --------->ARR14(2)                                 ------                                            <---------ARR11(3)                                 ------                                           --------->GLK1(1)                                   <-----                                           <---------GLK1(1)                                   ------                                          ----------->ARR10                              <---------At4g35610                                        --------->LBD16                                  --------->At4g35610             <---------At4g35610       --------->LBD16                                 -------->ZAP1             --------->bZIP60(2)      <---------HSFB2a(2)    --------->At5g28300     <---------WRKY18(1)    ----------->RAV1(2)               --------->HSFB2a(2)   ----------->GT1          <-----------GT1   ------>MYB83                       <---------LBD16   --------->MYB46(3)          --------->WRKY38(1)   ------>MYB46(1)              --------->ARR11(3)    --------->MYB52(1)            ----------->HVH21 -------->MYB46(3)              <---------AHL20(1)  --------->MYB46(3)        <---------ATHB12<------ --->YAB1    --------->At4g35610<---------ARR11(3)  ------>ZmHOX2a(2)  <----------DOF2<---------At5g28300   taaccagcctgagccatctcaccataatgtatgatatattcccggagatcttgatccaacggctgtaacatccctttccaatggttttgaccgctcagat  10226800     <-----------ARR10    <---------CCA1(2) ------->ANAC58 ------->ANAC46 ------->ANAC58 -->ZmHOX2a(2) --ZmHOX2a(2) ----ARR14(2)                                            <<<<<<<<<TBF1 ----ARR11(3)                                       <----------DOF2 ------ARR10                                      ------>ZmHOX2a(1) --->ARR11(3)                                  ------>ZmHOX2a(1) --->ARR14(2)  --------->ARR14(2)             <---------ALFIN1         <---------GLK1(2) ----AGP1      <---------ARR14(2)           ------>ZmHOX2a(1)        <---------YAB1 --->AGP1  --------->HSFB2a(2)             <---------ALFIN1          --------->ICU4 ---CCA1(2)<---------HSFB2a(2)           ------>ZmHOX2a(1)     ------>ZmHOX2a(1)                    <   ctcgccatctcttcgcgaattctctagtcactatcaacttctcctcctcctcctctttcttcttcctcttcatgattctcttgaagctaaaacacttcat  10226900                                <---------GLK1(1)                   <------ZmHOX2a(2)  ------>ZmHOX2a(2)                               --------->ARR11(3)                 <------ZmHOX2a(1)    ----------->GT1                               <---------ARR11(3)                 ============================HOX2a_HOX2a                             <---------TOE2(3)                  --------->MYB59   <---------TOE1(2)                         <----------DOF2                       --------->YAB1   <---------ANAC46       ---------->ID1   <---------ICU4                 <---------TOE2(3)    <---------HSFB2a(1)  <---   <---------ANAC58   --------->GLK1(2)     ------->TEIL----------->GT1     --------->HSFB2a(1) -----   <---------ANAC58   <---------ARR11(3) --------->ICU4<---------TOE1(3)    --------->HSFC1(2) ------ ----------DOF2 ------>ZmHOX2a(1)        <---------YAB1--------->MYB59      <---------HSFC1(2) <-----   cactttcttgtcttcttcctccataatctttaagatacctgtaatgaatgttttgtttaggttaattaggatcagagaagctccttggatcgaaaaatta  10227000                                                                      <---------ANAC58        <------                                                                      <---------ANAC46        -------                                                           <---------ANAC46                   <------                                                           <---------ANAC58                   -------                                                           <---------ANAC58                  <-------                                                          <------NtERF2 <-----------RAV1(1)  <-------                                                        <---------DEAR3(1)           <---------HSFC1(2)    ------->TEIL                             ----------->TBP  <------------CBF       --------->HSFC1(2) ------TOE2(3)                               --------->AHL20(2)       <---------ANAC58       <------- ----->DOF2                                  <---------AHL20(2) <---------REM1(1) <------ZmHOX2a(1) --->AHL20(2)                    <---------MYB46(3)  <---------MYB46(3) --------->ALFIN1     ======== ----AHL20(2)          ------------>CBF <---------YAB1 <---------MYB52(1)     --------------------->WRI1   aagatgaattttgttgaaaaatgaaaacaatagagtggtttgatgatataaatattcgttggcgtattgtaggcgtgttgcagaggaagtatcgttctcg  10227100                                                                                 --------->ANAC58                                                                                 --------->ANAC58                                                                              <------ZmHOX2a(1)                                                                       --------->TOE2(3)       --------->AHL20(2)                                             <---------------AGL15       <---------AHL20(2)                                            <-----------------AG ----------->GT1                                          --------->ARR11(3)<---------TOE1(3) ---------AGL15                                       ---------->DOF2<---------TOE2(3) -->HSFB2a(2)                                       --------->LBD16  <---------TOE1(3) ---HSFB2a(2)                           --------->TOE2(3) <---------ARR11(3)<---------TOE2(3) -------->AGL15                   --------->DAG2  ------>ZmHOX2a(2)  <-----------------AGL1 ----------AG ---------->DOF2    ---------->DOF2  ===================================HOX2a_HOX2a   <- ----------AGL2          <---------AHL20(2)  <---------WOX13(1)     <-----------GT1     --------->At4g35610 ----------AGL1         <---------AHL20(2)  <------------CBF    <----------DOF2---------->DOF2<------ =====================================================================================MADS_MADS<-----   atatggtattaaaatataaagtattttttatttgataaagtttcttaattgatccgaaaagatgttcttttaacgtttaaggaaagcaatagctcacctt  10227200                                                                                              <------                                                                                      --------->TOE1(3)                                                                                      --------->TOE2(3)                                                                                   ------>MYB83                                                          <-----------GT1          ------>MYB46(1)                                                      <---------DAG2             --------->AtMYB61                                                      <----------DOF2         <-----------GT1 ------- --------AtLEC2                                    <-----------GT1       ----------->GT1  --------->DAG2 ---DAG2<-------TEIL                             <-----------GT1 <-----------------AGL2  ---------->DOF2 -----DOF2 --------->ANAC46<----------DOF2  <----------DOF2    --------->AtLEC2  <---------MYB59   tgcatcaacatacacagtacaaacgattcctttctcttcttgtaatctttttttcactttttgccatgctgcaaatggtttaaccaaacctaaaagcggt  10227300                                                                              ------>MYB46(1)                                                                            <---------MYB59                                                                            <---------MYB46(2)                                                                            <---------------AGL15                                                                            =========================                                                                       --------->TOE1(3)                                                                       <---------MYB59                                                                       --------->TOE2(3)                                                                       <---------DAG2                                       <------ZmHOX2a(1)              --------->HSFB2a(1)                                <---------AHL20(2)                   <-----------ARR10                           --------->ARR11(3)                        ------->TEIL                           --------->AHL20(1)                       ------>MYB46(1)                           <---------AHL20(1)                       ------>MYB83                           <---------ARR11(3)                     <---------MYB59                 <--                          --------->CCA1(2)                       <---------MYB46(2)         <-------                         <---------ARR11(3)                       <---------MYB52(2)        ---------             ===============================================================================MADS_MADS             <---------------AGL15   --------->ANAC46       <---------------AtSPL3       <---------YAB1 ---MYB46(3) --------------->AGL15   <---------TOE2(3)      <---------------AtSPL8  <------ZmHOX2a(1) ---->GT1 <-----------GT1--------->ARR11(3)    ----------->GT1 <-----------GT1------>MYB83 <---------AHL20(2)   tcaatgtcaaatttactcaaatttgaagatatattttataaggaatcaacagtgaaactaattttgtaccgaaccttaccaaactaggattattttaaat  10227400  Previous    Next  AGI:  At4g18550.1    Description:  lipase class 3 family protein. similar to lipase class 3 family protein [Arabidopsis thaliana] (TAIR:AT1G06250.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48079.1); contains InterPro domain Lipase, class 3; (InterPro:IPR002921) Range:  from: 10224932    to: 10226873    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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