Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            ------>ZmHOX2a(1)         <---------MYB59  <---------ICU4  --------->YAB1 <---------ATHB12                      <----------DOF2 ------->WOX13(1)          ---------->DOF2                                 <---------ANAC46 ------->YAB1           --------->ANAC58                            <---------ANAC58 ------>MYB46(3)        --------->AtLEC2      --------->ZAT14       <---------ANAC58         <------- --->MYB46(3)           --------->ANAC58      <---------ZAT14   <---------ANAC58      <---------GLK1(1) --->RAV1(1)           --------->WOX13(1)     <---------ZAT18   <---------ANAC58<---------ZAT6   acaatcatgttcctaacttcaaaatcaagcaaagtctgaaactttcagtgaacatcatcaaaaaatgcttacttgttcagtagagttgatttcagtggct  10203100        --------->ANAC46        ------->GAMYB     --------->MYB52(1)                  ----------------->AGL1      <---------ANAC58  --------->YAB1                         <-----------------AGL3<-----------GT1 <-------TEIL                           ---------->ID1  ------>ZmHOX2a(1)  --------->ANAC46 --MYB46(3)                         <----------DOF2 <---------GLK1(1)<---------ANAC58 ------>ZmHOX2a(1)   acattcataaccgaaacatggtaacgagacctgttcttctttggccttatttggattcctgcatttaacttgcttccaaacaattttcctgtatacaaaa  10203200                                                                                 --------->ALFIN1                       ----------->GT1                                     --------->ANAC58    <-----           --------->ATHB12                 <---------TOE1(3)              --------->ANAC58    ------           <---------ICU4                   <---------TOE2(3)         <---------ANAC58         <-----          --------->ICU4              --------->ARR11(3)              <---------ANAC46         <-----          <---------YAB1              <---------ARR11(3)              <---------ANAC58      <------ZmHOX2a(1)      <---------At5g28300       ----------->GT1                       ----------->RAV1(2)<------ZmHOX2a(1)     <-----------GT1 ----------->GT1----------->ARR10            ----------->RAV1(2)   --------->ALFIN1   attcaattcaccatgatttcgaattgagaaaaaacagtaagattttaaggtttggagagactggtttacctggcctgaagcaaatgggggaggaggaagg  10203300                                                                          <---------ANAC58                                                                          <---------ANAC46      <----                                                                ------>NtERF2                  <-----    <------ZmHOX2a(1)                                          --------->ANAC58         --------->ZAT14  <---------TOE2(3)                                            --------->ANAC46<---------At4g35610 -MYB46(1)                                                     --------->ANAC58--------->At4g35610  < --->HSFB2a(1)                                               --------->CCA1(2) <---------ZAT2  <----- ----HSFB2a(1)         <------ZmHOX2a(1)       <---------ARR11(3)         <---------ANAC58     ------ -MYB83 <------ZmHOX2a(1)                      --------->ARR11(3)   --------->ICU4      <---------ZAT14   ttttgaggaaggagaagagagtgaaggagaagcccagattgcagaagaagatgttccaagaagagacgccatttttgtgtgagcttagagtttactcagc  10203400        <----------DOF2       <---------ANAC58       <---------ANAC58   <---------WOX13(1)                             --------->MYB52(2) --------->ATHB12                         <---------ANAC58                      *TSS               <- -----GLK1(2)             <---------AHL20(2)  <---------YAB1           <------ZmHOX2a(1) <---------CCA1(2) ----At4g35610   --------->TOE2(3)        <---------ANAC58       <------ZmHOX2a(1)     ------>ZmHOX2a(1) ---------YAB1   --------->TOE1(3)        <---------ANAC46    <-----------RAV1(2)   ------>ZmHOX2a(1) ----ZAT2   <-----------GT1           <---------MYB52(1)<-----------RAV1(1)    --------->GLK1(1)   <- --->At4g35610<-----------GT1     >>>>>>>>>>>>>>>>>LFY  ==================RAV  <---------GLK1(1)-----   ttctgattggcttttttcaccttagaatttttttgtttccattggcttatgtttgtttctgtggtcaggataaggagatagatttcctcctctatctcct  10203500                                                                                       --------->TOE1(2)                                                                                       --------->TOE2(2)                                                                                    ------>MYB83                                                                                  <---------MYB59                                                                           --------->AHL20(2)                                                                           <---------AHL20(2)                                                                           ----------->TBP                                               --------->SPL7   <---------At4g35610 ------>MYB46(1)          --------->YAB1                     <---------SPL7  <---------ANAC58     <---------MYB46(2)        <-----------TBP             <---------AHL20(2)       <---------ANAC58    --------->ANAC46      <---------AHL20(2)     ----------->GT1--------->RAP2.6(2) <---------ZAT2 <-----------GT1     <---------AHL20(2)  >>>>>>>>>>GT-1    --------------->AtSPL8        <---------AHL20(2) --------DAG2            --------->ARR11(3)--------------->AtSPL3        --------->AHL20(2) ---------DOF2       --------->YAB1 --------->AHL20(1)    --------->DAG2 ----------->TBP         ---- ->ZmHOX2a(1) --------->WOX13(1)    --------->AHL20(2)  ---------->DOF2----------->TBP--------->YAB1   ccttttttttatttataaatcaaaaatgatatagaaaataaaatagccgtaccaaaaaaaaaggcgagcttctatatatatataccaaacataagaatat  10203600                                                                     <-----------GT1                                                               <------NtERF2                                                              <---------RAP2.3(1)                                                             <---------DEAR3(1)                                                             <---------At1g77200                                                            --------->ATERF1(1)                                       <-----------ARR10    <---------MYB52(1)      <------NtERF2                           <---------At4g35610             <-----------HVH21      <---------ANAC46 --                           --------->At4g35610            <---------ANAC58        --------->bZIP60(1)                           <---------ZAT2             <---------GLK1(1)           <---------bZIP60(1)         *TSS --------->ATHB12         --------->ARR11(3) <---------ANAC58       <------NtERF2     --      --------->ANAC58     --------->ZAT2     <---------ALFIN1------>NtERF2    --------->ALFIN1  <---      --------->ANAC58------>NtERF2    <---------ARR11(3) <---------ANAC46   --------->LBD16    <---- ------>DOF2 <---------ATHB12         <---------GLK1(2)--------->ARR14(2)  <---------LBD16<----------   aaaggcccaagtcaaatcattcggagcccagctaatttcaaaatctccccccttcgagttccgtcggcgattttctctccggtgtcgtcgtcttgttgcc  10203700            <---------MYB52(1)           --------->TOE2(3)         <---------TOE2(3)  ------->TEIL<---------DOF5.7(2)                                                                 <-- ------->WRKY12                                                                           <---------- ------->WRKY38(1)                                                       <---------ANAC58 --------->GLK1(2) ----GAMYB --------->TOE1(3)                                   <---------At5g28300     ----------->ARR10 -----ANAC46--------->DOF5.7(2)       ---------->DOF2         <-----------GT1       <---------ANAC46< -RAV1(1)<---------TOE1(3)         ------->GAMYB    ----------->GT1      <---------ANAC58<---------GLK1(2)   gttgaacgtttatcgttagcgcctactacatatacaactgcaaagcgattcaatcggtaagaatttaccctcgttgctcgtcgattgagtagaatctcac  10203800                                                       --------->YAB1                              --                                                <---------MYB46(3)                              <----                                               ------>ZmHOX2a(2)                                <----                                          <---------TOE2(3)                             <---------ANAC46                                <-------TEIL  <------ZmHOX2a(2)                         <---------ANAC58 >>>>>>>GRF7                <---------TOE2(3)--------->ARR14(2)                         <---------ANAC58 ---------HVH21             <---------TOE1(3)<---------ARR14(2)    ------->TEIL      ----------->HVH21 -ARR10       <---------At4g35610    --------->ATHB12 <---------YAB1                 ----------->TGA1 -----------RAV1(2)  <---------MYB52(1)<---------WOX13(1)<---------YAB1      <-----------HVH21  <----   tgtcaggcgttgttttagcttcggtttgctaaggttcgacgattgacgatcggttgatcataatcgatgaacatttctgtgttagaggtgacgtttatgc  10203900                                                                                                  <--                                                                                                  ---          --------->ANAC58                                            --------->WRKY38(1)        <---          --------->ANAC58                                   <---------At4g35610                <----  --------->CCA1(2)                    <----------DOF2    <---------ANAC58                      <---- <---------ARR14(2)                  ------->TEIL         <---------ANAC46                      <---- --------->ARR10      ===============================HOX2a_HOX2a      --------->WRKY12          <---- -----ANAC46          <------ZmHOX2a(2)<---------DAG2     <---------ANAC58  --------->LBD16     ----- -----ANAC58      <---------------------WRI1  ------>ZmHOX2a(1) <---------At4g35610             <---- -----ANAC58   <---------HSFB2a(1) <-------TEIL   --------->TOE2(3) <-------GAMYB            --------   gtagatttgagtaagaaatgttcgatcaatgctaagatgcactttctcctaaacttagtttcgtgctgctcgttgtccctgaaatttagtctcgagtggc  10204000  Previous    Next  AGI:  At4g18480.1    Description:  CHLI1 (CHLORINA 42); magnesium chelatase. Identical to Magnesium-chelatase subunit chlI, chloroplast precursor (CHLI) [Arabidopsis Thaliana] (GB:P16127); similar to CHLI2, magnesium chelatase [Arabidopsis thaliana] (TAIR:AT5G45930.1); similar to unknown [Populus trichocarpa] (GB:ABK95697.1); contains InterPro domain Magnesium chelatase ATPase subunit I; (InterPro:IPR011775); contains InterPro domain AAA+ ATPase, core; (InterPro:IPR003593); contains InterPro domain Magnesium chelatase, ChlI subunit; (InterPro:IPR000523) Range:  from: 10201683    to: 10203480    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g18490.1    Description:  Identical to Uncharacterized protein At4g18490 [Arabidopsis Thaliana] (GB:P16128;GB:Q9SB82); similar to hypothetical protein [Vitis vinifera] (GB:CAN81126.1) Range:  from: 10203609    to: 10208208    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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