Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        --------->ANAC46    <---------AHL20(2)                                                          <---------ZAT2                 --------->AHL20(2)                                                        <---------ZAT18           <---------ANAC46 <---------TOE2(3)                                     <---------ANAC58       <-----------HVH21 <---------TOE1(3)                         <-------TEIL<---------ANAC58      --------->ANAC46       - ----->YAB1 ----------->GT1             --------->At4g35610  <-------TEIL    --------->ANAC58   ----- ----->TOE2(3)  <---------AHL20(2)     <---------ARR11(3) --------->At4g35610--------->ANAC58   -----   cttaaggtagtcatttgttaaattttggtattcaatctcgagagcttcataagtctagcgagcttcataaacacactacaagtcatgtgtataaaatttc  10192500                                                                                                  <--                                                                                               <-----                                                                                               <-----         <-----------GT1                     --------->DAG2                                   -------         --------->YAB1                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)              <------ -------->GLK1(2)                  <xxxxxxxxxxxxxxxxsmallRNA(i) --------->AHL20(2)         --------->ARR11(3) ------------>AG      <xxxxxxxxxxxxxxxxsmallRNA(i)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)     <---------ARR11(3) ------------>AGL1   --------->TOE2(3)      ---------->DOF2  --------->ATHB12          ---------->DOF2   caattctgtaatcacaagtctaaacttaatctgaatccaaatcacaaaaagcattttcaaaattgattaaaaaaaaaactacaatatagaaaagatttta  10192600                                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                      <---------ANAC58                                      <---------ANAC58                                 --------->ATHB12                                <---------YAB1           --------->ANAC58     --------->ICU4           --------->ANAC58    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)    <---------ANAC58       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)    <---------ANAC58     <---------ANAC55(2)  ---------->DOF2    <---------ANAC46     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)        <---------ARR14(2)   --------->ATHB12      --------->ANAC55(2)----------->HVH21         --------->ARR14(2)  <---------YAB1         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) <---------YAB1 -------WOX13(1)         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)xxxxxxxxxxxxxxxx>smallRNA(i) ----AHL20(2)       --------->ZAT6  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)            <---------TOE2(3) ----YAB1<xxxxxxxxxxxxxxxxsmallRNA(i) <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)            ---------->DOF2 -->AHL20(2)       <---------TOE2(3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)<---------ALFIN1 ---AHL20(2)    <---------MYB52(2) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)--------->MYB46(3)---------->DOF2   attgatgcttggaacggaactaacattacctgttatgatttcgggcctgaaagtattctgagttttgattcagaaccactcggtattaaagaaaaagaag  10192700                                      <---------YAB1                                    -------->ATHB1                           <---------AHL20(2)                         <---------AHL20(2)    ------>MYB46(1)                       <---------AHL20(2)      ------>MYB83                      <---------AHL20(1)    --------->MYB46(3)                                     --                      --------->AHL20(1)  <-----------GT1                                          <-                     <---------AHL20(2)--------->YAB1                                             <--                 <---------AHL20(2) <--------HAHB4                                               <---                 --------->AHL20(2) <---------ICU4                                          ---------             <---------AHL20(2)     --------->ATHB51                                    --------->TOE1(3)             --------->AHL20(1)     --------->YAB1                                      --------->TOE2(3)             --------->AHL20(2)    --------->ICU4  <---------YAB1                       --------->TOE2(2)            --------->AHL20(2) <---------YAB1------->GAMYB                              --------->TOE1(2)   acttactacaaaaaaaaaattatatatatttttatgaattattataaccaactaatattgtctctattggttctaagttcaaacttctaaccttcgaggg  10192800                                                         <------------CBF                                                    ----------->GT1   <-------TEIL                                     <------NtERF2                         --------->ARR11(3) ------->LBD16                                    <---------ANAC58                   <---------HSFB2a(2) -----NtERF2           <---------AHL20(2)         <---------ANAC58            <---------TOE2(3) -------ANAC46        --------->AHL20(2)          <---------ANAC46            <---------TOE1(3) ------LBD16          <---------AHL20(2)         <---------LBD16      --------->HSFB2a(2) <---------ARR11(3) >HSFB2a(2)<---------HSFB2a(2)     ------------>CBF--------->LBD16   <---------ETT(2)--------->HSFB2a(2)   ccgggttcaaattccagtaagtgatttattttttgctaacaattctcttatggcgggaaaattgacttctgtcgagaattagggtttctacaaatctttc  10192900                                                        --------->At4g35610                                                        --------->ZAT2                                                        <---------At4g35610                    *TSS                                <---------ZAT2                   --------->ARR11(3)                <---------At4g35610                   <---------ARR11(3)             <---------ANAC58                         --------->ARR11(3)                 <---------TOE2(3)               <-----------RAV1(1)              ---------->DOF2----                 <---------YAB1                <----------DOF2                  <---------YAB1 ------         <---------LBD16         ------>ZmHOX2a(1)<---------ANAC58    ----------->GT1      <---------ARR11(3)   tccgttctaatttcggattaagatttcaatctctccttctcgttttcttctttggtgctgctgagaagaaattagtgaaattgtgaaagagaagatgtcg  10193000                                                            --------->At4g35610                                                     <---------ANAC58                                                     <---------ANAC46                                                  <--------P<---------At4g35610                                                 <-------GAMYB                                                 <------NtERF2                                                 --------->At5g28300                                    --------->ALFIN1 <---------ANAC58                                   --------->ATHB12 <---------ZAT2                              -----         ----------->GT1--------->ANAC58         <---------MYB52(1)            <---------WOX13(1)  --------->CCA1(2)     --------->ANAC46       <---------RAP2.6(2)           --------->ATHB12<------- <----------ID1         --------->ANAC58       <---------ANAC46  <---------ALFIN1       <---------LBD16 ------>DOF2   --------->YAB1     --------->ICU4<---------DEAR3(2)          <---------YAB1   -------- --->ETT(2)    <-----------GT1    <---------YAB1<---------MYB46(3)          --------->ICU4--------->LBD16   aaagagacgaagggtaataacaatacaagcagagtgatgagtggctatggcggtagcttggaagctaacaccttggctatgattgattccaccggagcta  10193100                              <---------ARR14(2)                              --------->ARR14(2)                          --------->SPL7                        --------->TOE1(2)                       ------>ZmHOX2a(2)                       ==================HOX2a_HOX2a                      --------------->AtSPL3                      <---------------AtSPL3                      ===================HOX2a_HOX2a                      <------ZmHOX2a(2)                      --------------->AtSPL8                      <---------------AtSPL8                     --------->ARR14(2)                     <---------ARR14(2)                     <---------ARR11(3)                     --------->ARR11(3)               <---------TOE2(3)          --------->ANAC58<---------TOE1(2)          --------->ANAC58<---------TOE2(2)                                                  --------       ----------->HVH21<---------SPL7                                                       -------- ----->DOF2   --------->MYB52(1)        <-----------GT1                            <---------AtLEC2 --At4g35610  <---------DOF5.7(2) ------>ZmHOX2a(1)                            ------>ZmHOX2a(1) ->At4g35610--------->DOF5.7(2)  --------->TOE2(3)   <----------DOF2         ------>ZmHOX2a(2)  <----   aagacagtcgcgacgctaacgaagatcgtacgtttcctcaattttcaatcttcgtctttgtttttgttaattgtattgatcctttgaatgaaaaacctta  10193200                                                             <---------ATHB12                                          --------->LBD16    --------->MYB46(3)                                         --------->LBD16    ------>MYB46(1)                                         --------->ANAC46 <---------MYB111(2)                     <---------ANAC58    <---------------AGL15                     <---------ANAC58   =============================================================               --------->At4g35610      <-----------------AGL3  --------->ANAC58               <---------ZAT2           ----------------->AGL3  --------->ANAC58         <---------LBD16                ----------------->AG------>MYB83       --------->GLK1(2)<---------At4g35610             ------>ZmHOX2a(1)       --------->ARR14(2)               ----------------->AGL2  ----------->GT1       <---------ARR14(2)               <---------HSFB2a(2) -------->P ->TOE2(3)--------->HSFB2a(2)           <-----------------AGL1------->GAMYB ->TOE1(3)<---------HSFB2a(2)<----------DOF2       --------->GLK1(1)      --------->AHL20(2) -----TOE2(2)  <---------At4g35610    ------->TEIL <---------GLK1(1)     --------->AHL20(2)   ggtttgcagtatctggaagctgttcgtgctgcttcacttgtacccgaaaatggaattcctccaaccaagtaaaaaataaaaaactctgtttttctaagaa  10193300                                                                                                -----                                                                                                <----                      --------->ZAT14                                               <---------ARR14(2)                      <---------ZAT14                                               --------->ARR14(2)                    <---------------AtSPL3                                          --------->ARR11(3)                    <---------------AtSPL8                                          <---------ARR11(3)                 ---------->DOF2                                       ------>MYB83<------ZmHOX2a(1)            --------------->AGL15--------->ATHB12                      ------>MYB46(1)          <----            --------->ZAT6      <---------YAB1                         --------->ANAC58      --------         <-----------GT1  --------->ICU4        <---------AHL20(2)     --------->ANAC58   <---------TOE2(3) ===========================MADS_MADS           --------->AHL20(2) ------->TEIL <---------LBD16------   atttgaagtttttacctctaaaagagtactgattttgatttgggttttgtttaattttgaagcaaaatgtaccaagcgattttcaggatattgagatttg  10193400  Previous    Next  AGI:  At4g18470.1    Description:  SNI1 (SUPPRESSOR OF NPR1-1, INDUCIBLE 1). similar to unnamed protein product [Vitis vinifera] (GB:CAO66366.1) Range:  from: 10192920    to: 10195673    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version