Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 --------->YAB1      --                                  <---------YAB1                            --------->YAB1    ------- ------->ZAT14     --------->ATHB12  ------->TEIL                <---------ATHB12           --------- ->GLK1(2) ------->TEIL     <---------AHL20(2)     --------->GLK1(2)     <-----------GT1    <--------   ctaaacttccatgaatcttcttcatttgatttttttatgaaactaagaaacagaatcaatgttcacaatcagttttaactataatctctcactcagcaaa  10170900                                                                                              -------                                                                                             <-------                                                                                            ---------                                                                                          <---------SPL7                                                       <---------GLK1(1)                 <---------ANAC58        --------->ARR11(3)                            <---------ARR14(2)                 <---------ANAC58        <---------ARR11(3)                            <---------ARR11(3)                <------------ -------->DOF2    <---------REM1(2)                   --------->ARR14(2)             <----------DOF2 --->DOF2         --------->ZAT14                     <---------GLK1(2)            <---------ZAT2 >At4g35610       <---------ZAT14             <------ZmHOX2a(1)                 <---------ANAC58    - -At4g35610<----------DOF2            --------->ICU4  --------->ARR11(3)        <---------ANAC58 ----   gtaaagagaagctctttctctacacttagtcaaattagtgattatgcaggaccaaggattttcgattagaactacaaaaaatgcgagctttgggtacgat  10171000     <---------YAB1     <------ZmHOX2a(2)    <---------ARR11(3)                                                            --------->DAG2    --------->ARR11(3)                                                           --------->DAG2------ ---->GT1                                                                <---------HSFB2a(2)   <----- --YAB1                                                                  --------->HSFB2a(2)   ------ >SPL7 --------->KAN4(2)                                            <-----------RAV1(1)      -------- ---AtSPL3 <---------YAB1                  --------->ANAC58         <---------REM1(1)    ----------->GT1 --------->DOF2       ----------->GT1      --------->ANAC58        <---------TOE2(3)   ---------->DOF2 ----->AHL20(2)     ----------->GT1      ---------->DOF2   <---------ATHB12     ---------->DOF2<-----   taaaaagatcattctaattgaagggagataatagaaaaacccagaaagcaaaaccctagaaatcaatttgatgttgcagaagaaaaggggaaagtaagat  10171100                                                    --------->HSFB2a(1)         <------NtERF2                                                    <---------HSFB2a(1)        --------->LBD16                                                   <---------KAN4(2)          <---------DEAR3(1)                                                <---------ANAC46              <---------ANAC46                                              --------->MYB55(2)            ------>NtERF2                                             --------->ALFIN1              <---------RAP2.6(2)      -                                            <---------MYB52(1)             <---------LBD16         <-                                           --------->LBD16                 <---------RAP2.3(2)    <--                                       <---------ARR14(2)               --------->GLK1(2)       -----                                     <---------HSFC1(2)                --------->ARR14(2)       -----                          <------NtERF2--------->ARR14(2)              <---------GLK1(2)        <---- --->ARR11(3)            --------->LBD16 <---------LBD16      <------MYB83<---------LBD16     ------- ----ARR11(3)          <---------LBD16--------->DOF5.7(2)     <------MYB46(1)<---------LBD16  <------ --->AHL20(1) ------>ZmHOX2a(2)      --------->HSFC1(2)     <--------P <---------ARR14(2)     <------ --->ARR10 <------ZmHOX2a(1) <------ZmHOX2a(1)<---------MYB46(3)     <---------YAB1           ------- ----AHL20(1) ======================HOX2a_HOX2a<------NtERF2--------->ALFIN1--------->LBD16 <------ZmHOX2a(1)   attacttcgactaggatcgaatgtagccggaggagtagacgtttccggtgggggatgttcgggttgggatgaagattccggcggagaaggaagaggaggt  10171200                                                                             ---------->DOF2        <---------ZAT18                                                 --------->AHL20(1)        --------->ZAT18                                                 <---------AHL20(2) -------->LBD16                                                         --------->AHL20(2) --------ANAC46                                                 <---------RVE1(1)   ----------->RAV1(2) -------LBD16                                           ----------->RAV1(1)<---------YAB1 ---->GLK1(2)                                    <---------AHL20(2) *TSS<---------AHL20(1) --------->AHL20(2) ---->ARR14(2)                                  --------->AHL20(2)  <---------AHL20(2)   ----------->GT1 -----ARR14(2)          ------>NtERF2           <---------AHL20(2) <---------YAB1   --------->At4g35610 -->HSFC1(2)            --------->LBD16     <---------ARR11(3) <---------GLK1(2)    <---------At4g35610 ---HSFC1(2)           --------->ANAC58   --------->ANAC46     --------->ARR11(3)   <---------ZAT2 ---HSFB2a(1)          --------->ANAC58   --------->ANAC58     <---------ARR11(3)   --------->ZAT2  < -->HSFB2a(1)          --------->ANAC46   --------->ANAC58    <---------RVE1(1)   <-----------RAV1(2)   tccggtgaagttcgcttctcttcttccgccattgaagaagtttcaagaaatttttttcccacagagatttttattttattaaagtcagctgaagtaaata  10171300                                           <---------MYB52(1)                                         <---------ANAC58                                      <-----------GT1                                   <---------AHL20(2)         <------------CBF          --------->AHL20(2)        <---------ICU4         --------->AHL20(2)       ------>ZmHOX2a(1)       <---------AHL20(2)       <---------YAB1         <---------AHL20(2)                  --------->ARR11(3) <-----------ARR10            --------->AHL20(2)      --------->DAG2 <---------ARR11(3)      --------->At5g28300  ----------->GT1     <---------ARR11(3)          <------ --------->ARR11(3)>>>>>>>>>>>>>>>>>LFY  <---------ANAC58     ---------->DOF2      <---------AHL20(2) ---------GLK1(2) <-----------GT1 <---------AHL20(2) ---------->DOF2 <----------DOF2        ---------   caaaatctccttattgctattttccactgtgatttatttatttccgttttgttaaaaaagttttaaaagctctttataatgtcattttatcaaatagtga  10171400             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)          <---------AHL20(2)     --------------------->WRI1    <---------AHL20(1)          --------->YAB1    --------->AHL20(1)          <---------ICU4    <---------AHL20(2)         <---------YAB1   --------->AHL20(2)   --------->AHL20(2)   --------->At4g35610   --------->YAB1       <---------AHL20(2)   <---------At4g35610                              <------  <---------YAB1 <----------DOF2--------->ATHB12                      ----------->GT1         ======= ---ZAT6 --------->AHL20(2) --------->AHL20(2)     ----------->GT1--------->DAG2              ------- -->GT1  <---------AHL20(2) <---------AHL20(2)<----------CDC5    ---------->DOF2 <----------ID1   tactattatattttaatttctttcatataatttatcattgtttatttcgctgagggaaaaaaaactataaagtcgtttaaaaaaaaacaaatccaactat  10171500                                                                                          <----------DOF2                                                                                        <------ZmHOX2a(2)                                                                                       <---------ARR14(2)                                                                                     xxxxxxxxxxxxxxxx                                                                                  xxxxxxxxxxxxxxxxxxx                                                                    --------->At4g35610<---------ARR11(3)                                                            <---------HSFB2a(1)  xxxxxxxxxxxxxxxxxxxx                                                           <xxxxxxxxxxxxxxxxsmallRNA(fl3)------>ZmHOX2a(2)                                                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                          <xxxxxxxxxxxxxxxxsmallRNA(i)xxxxxxxxxxxxxxx                                                          xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                    ----------->GT1  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)     ---------->DOF2-------             --------------->AGL15   --------->MYB52(1)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)---------             <---------------AGL15   xxxxxxxxxxxxxxxxx>smallRNA(le3)<---------At4g35610--------->ARR14(2)            <-----------------AGL3xxxxxxxxxxxxxxxx>smallRNA(i)    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)            ----------------->AGL3xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)    xxxxxxxxxxxxxxxx>smallRNA(s)        --------->MYB46(3)  --------->AHL20(2)         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)---------      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)---------      <-----------GT1       <---------AHL20(2)        xxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxxxxxxx     <xxxxxxxxxxxxxxxxxxxsmallRNA(le3)         <xxxxxxxxxxxxxxxxsmallRNA(i)   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)xxxxxxxxxxxxxxxxxxx>smallRNA(l2) ----------->GT1   --------------->AtSPL8<xxxxxxxxxxxxxxxxsmallRNA(i)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) ---------AGL15    <---------------AtSPL8xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2) <---------REM1(1) ============================MADS_MADS  <xxxxxxxxxxxxxxxxsmallRNA(i)--------->ZAT2<xxxxxxxxxxxxxxxxxx -------->AGL15--------->AHL20(2)xxxxxxxxxxxxxxxx>smallRNA(i)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2) <xx   attttgtaaaaccacctataaatagtacaattaatcgataaacggtctatttccccatgggaactatcgcatctggctagatgaagcccgatctttgacc  10171600       <-----------GT1                            ---------->DOF2        --------->ANAC46 xxxxxxx>smallRNA(fl3)                        ------>MYB46(1)            --------->LBD16 xxx>smallRNA(le3)                            ------>MYB83              <---------HSFB2a(2) >smallRNA(le3)                             <---------MYB111(1)         --------->HSFB2a(2) xxxxxx>smallRNA(se3)                     ----------->RAV1(1)           --------->LBD16 --->ID1                                  ------>NtERF2                 <------NtERF2 >WRKY38(1)                              <---------ALFIN1      <----------DOF2               <------- -->HVH21                                --------->ANAC46   xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) >WRKY12                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)      <---------LBD16     --------->At4g35610 xxxxxxx>smallRNA(le3)----------->GT1   --------->MYB46(3)  --------->ARR11(3)         --------->HSFB2a(2) xxsmallRNA(fl3)    ---------->DOF2   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)--------->LBD16 <---------ARR11(3) xxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)   <-----------GT1        <---------ARR11(3)         <---------HSFB2a(2)   tcttgctatttacccatgaaatgaaagttaaacgtctatttccccaccaaataaaagttgaagagcttaatgtccccgaaataaaacttcgagagcttaa  10171700                                    <---------ARR14(2)                                    --------->ARR14(2)                                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                       --------->ZAT14                                                     xxxxxxxxxx                       <---------ZAT14               ------>MYB83                      <---------AHL20(2)                      <----------DOF2                ------>MYB46(1)               ------>MYB46(1)                    <------MYB83 --------->ANAC46  ------->GAMYB                   ------>MYB83    <x                    <---------DEAR3(2)          <-----------GT1                  <---------MYB59  ---                    <------MYB46(1)xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)           --------->TOE2(3)<--      <---------AGP1----------------------->TaNAC69(2)<---------MYB52(2)      <-----------GT1    ---- ---DOF2    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) --------->MYB46(3)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)   tgtccatagaactggattaagtcggtttactgtatgcgaaaccgatgacttaaccaactaaacctatttagaaccagaataaacctaatttaaaccaaaa  10171800  Previous    Next  AGI:  At4g18400.1    Description:  similar to hypothetical protein [Vitis vinifera] (GB:CAN62206.1) Range:  from: 10169877    to: 10171268    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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