Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     --------->ATHB51                                                                                   --------->ATHB12                                                                                   <---------ICU4                                                                                  <---------YAB1                                                                                  --------->ICU4                                                                                --------->YAB1                                                                                <---------ICU4                                                                                -------->ATHB1          ---------->DOF2              -------->P--------->AHL20(2) --------------->AGL15        <---------YAB1                 ------>MYB46(1)             <-----------------AGL3      <---------ICU4                   ------>MYB83  <---------ATHB12   ---------->DOF2      --------->YAB1                  ----------->RAV1(1)  <---------AHL20(2)   <--------HAHB4     --      -------->HAHB4                 ------->GAMYB<---------AHL20(2)<---------------AGL15          <-     --------->ICU4                 --------->MYB46(3)     --------->AHL20(2)  <---------ATHB12 -----     <---------ATHB51       --------->YAB1    ----------->GT1      --------->TOE2(3)            <----  <---------YAB1---------->DOF2     <---------MYB52(2)    --------->AHL20(2)   --------->ICU4  <-----   gtttctaattatgaaagaaaaagagttgtttcatagtaaccaacaagaagattaaatcaatttaaaaattcttaaaaaggaatcattattgatgtgttct  10165200              <-----------RAV1(2)           ----------->HVH21           <------ZmHOX2a(2)         <---------At4g35610         --------->At4g35610     --------->AtLEC2    <---------ARR11(3) ------->ARR14(2)        --------->ARR11(3)                               <----------ID1 --------GLK1(2)       --------->ANAC58                               ---------->DOF2           ----- ---->HSFB2a(2)        --------->ANAC58  --------->AHL20(2)          --------->AHL20(2)       <------ -----HSFB2a(2)    <-----------HVH21 <---------TOE2(3)               <---------AHL20(2)       ------- ----LBD16<---------ARR11(3)     <----------DOF2            ---------->DOF2              <----------DOF2   ggattctatgcagatcacaggtgtcaagctcttggctttgagattatatgaaaccaaaattttaaagcaaattaaaggaacaaatacacttctttctaca  10165300                                --------->HSFB2a(2)                               ------>ZmHOX2a(2)                              <------ZmHOX2a(2)                             <---------ARR11(3)                             --------->AGP1                             --------->ARR11(3)                        --------->TOE2(3)                                        --------->GLK1(2)                      --------->GLK1(2)                               --------->ANAC46                      <---------ARR11(3)                              --------->ANAC55(1)                      --------->ARR11(3)                              --------->ANAC58        -------                     --------->RVE1(1)                      <---------TOE2(3)   <---------ARR14(2) ------>GT1       --------->YAB1<---------HSFB2a(2)         <---------ANAC55(2) <---------GLK1(2)---- ---ZAT14   --------->ANAC58 <---------AGP1                 ----------->GT1     --------->ARR14(2) -->ZAT14   --------->ANAC58<---------CCA1(2)       --------->YAB1    --------->ANAC58     --------->YAB1   gtgaaattctcatcaagaaataaaaatcttagatctagaattgtttttttggaatcagaattaagtataaacacgaaattcagattctttctatgaaaaa  10165400                       <---------HSFB2a(1)                       <---------HSFC1(2)                                                       <----                       --------->HSFC1(2)                                                    --------                       --------->HSFB2a(1)                        <---------ANAC58           -------- <------MYB83    --------->HSFB2a(2)                              <---------ANAC58         <------MYB83 <------MYB46(1) <---------HSFB2a(2)             --------->HSFB2a(2)                       <------MYB46(1) --->DOF2  --------->MYB52(2)                    <---------HSFB2a(2)                      --------->MYB111(1) ----->ATHB12    <---------LBD16    --------->AHL20(2)         <------ZmHOX2a(1)         <--------P   gattggtttttgtttgtttctcggaaaattcgatgagataaattgagacttacagaagaaacagaggagcttgagcttggagttagtagtagtaggtgac  10165500                                                  --------->LBD16                                                  <---------HSFB2a(2)                               -                                                  --------->HSFB2a(2)                           <---- ---------->DOF2                              --------->ARR14(2)                             -------- -----ANAC46                                  --------->GLK1(2)          ----------->GT1    --------- --->TGA1         <----------DOF2         --------->YAB1                 *TSS               <-------- --->HVH21<----------DOF2   ----------->GT1   <---------ARR14(2)   <----------DOF2---------->DOF2 ---   gaagaaagagggctatagggttttagggatttgtatataagaaataaaaatccgagaaaattggaatttctttgatggtgattttaaaggagtgatcatc  10165600                                                                           <---------GLK1(1)                                                                           --------->GLK1(1)                                                                          --------->ARR14(2)                                                                          <---------ARR14(2)                                                                       --------->ANAC55(1)                                                                       --------->ANAC55(2)                                                                       --------->ANAC58             <------------CBF                                          <---------ANAC55(2) -------->ALFIN1                                                       --------->ANAC58 -------RAV1(2)                                                        --------->ANAC46          ---- ->YAB1     --------->CCA1(2)        <-----------GT1                  <---------LBD16            ---- >ICU4     --------->ARR11(3)    <---------AHL20(2)            --------->ANAC55(2)--------->ANAC58<-- -YAB1     <---------ARR11(3)    --------->AHL20(2)  <---------ICU4  <-----------GT1    ------>ZmHOX2a(1) ------>At4g35610         <----------DOF2     <-----------GT1  <---------ANAC55(2)--------->ANAC58---   agatggggagagagatattgggcataaactttgattttatttccatttttgcccttcattacattacttattcacggaattgccacggtcctctacaaaa  10165700             <---------YAB1                                                                       ---           --------->YAB1                                                                        ----       <---------AHL20(2)                       --------->AHL20(2)                           --------       <---------AHL20(1)                       --------->ATHB51                            ---------       --------->AHL20(2)                       --------->ATHB12                            <--------       --------->AHL20(1)                      <---------AHL20(2)--------->MYB52(2)         ---------      --------->AHL20(2)                ----------->GT1         <---------TOE1(2)        --------->AHL20(2) ----->RVE1(1)                    <-----------RAV1(2)          <---------MYB52(1)      --------->ANAC58 ----->CCA1(1)--------->YAB1   <---------GLK1(1)<---------AHL20(2)                     --------->ANAC58 -------ARR11(3)   ------>ZmHOX2a(1)<---------At4g35610      <---------ANAC58 --------->AHL20(2) <--- ------>ARR11(3)  --------->TOE2(3) --------->At4g35610      <---------ANAC58 --------->YAB1<--------   tatctgtattaaattatcatcctcagtaatttgatttcaggtgagaaaaattatttgatattttcgtttgtttttggcaataaaaacacaagaaaatatt  10165800 ------->DOF2          <---------AHL20(2) ----->AHL20(2)       --------->YAB1                                          --------->LBD16 ->AHL20(2)           --------->AHL20(2)                                     ----------->GT1 >ARR11(3)           <---------YAB1                                          <---------ANAC55(2) -AHL20(1)       <------NtERF2                                               <---------ANAC46 >AHL20(1)       <---------At4g35610                                         <---------ANAC58 ------AHL20(2)  --------->At4g35610                                         <---------ANAC58-------- -ARR11(3)       <---------ZAT2                                        <---------ATHB12   --------->GLK1(1)   taaagaagttttttttggcagctattatatcaagaagttgtgaacataaatgctatagaaatgttagaaacaaatcaatgcgtgaatatgagaaatcata  10165900               ------->TEIL      <-----------HVH21     <---------bZIP60(1)             --------->MYB46(3)     --------->bZIP60(1)        <------ZmHOX2a(1)     --------->TGA1a <---------TOE2(3)                   <----------DOF2    <------ZmHOX2a(1) ->YAB1----------->HVH21   <------ZmHOX2a(1)          <-----------GT1   ------>ZmHOX2a(1)   ttatctcatgtcacatgtatatttatgtaggagaggagaacaaacaaaaaaacaattcactttgtccaagtgtccttaggattttagtttgttcatagaa  10166000                                                                                             --------                                                                                            <--------                                                                                            <--------                                                                                          --------->WOX13(1)                                --------->YAB1                                        <------MYB46(1)                               <---------YAB1                                         <------MYB83<--                    --------->YAB1           --------->YAB1--------->REM1(1)         --------->MYB59                   <---------ATHB12         <------ZmHOX2a(2)                        <---------AtMYB61   atagaattcgattaatactcaataatctactctatgatatgtttcgatcataaaaaatgctacatgttttatgttttcaaaataggtttggtctatcatt  10166100  Previous    Next  AGI:  At4g18390.1    Description:  TCP family transcription factor, putative. similar to TCP24, transcription factor [Arabidopsis thaliana] (TAIR:AT1G30210.1); similar to TCP24, transcription factor [Arabidopsis thaliana] (TAIR:AT1G30210.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO40343.1); contains InterPro domain Transcription factor, TCP (InterPro:IPR005333) Range:  from: 10162964    to: 10165573    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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