Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           --------->At4g35610                       --------->YAB1          --------->DAG2                    --------->WOX13(1)        ---------->DOF2                                       <                   --------->MYB46(3) --------->DEAR3(1)   <---------At4g35610                   ----             <---------ARR11(3)  --------->ANAC58         <---------ARR11(3)                    <----             --------->GLK1(2)   --------->ANAC46         --------->ARR11(3)                   <-----             --------->ARR11(3)  --------->ANAC58  --------->MYB52(1)                        *TSS<---   tttgatattgatgaaaatctaacaatcagataaacaagcatcgacgagaaaagtaacagagagcttcttacctagaggcctagagagacttggtcttctc  10148700       <---------ANAC46      <------NtERF2    <---------DEAR3(1)    --------->ALFIN1                                       --------->AHL20(1)  <------MYB46(1)                                          --------->AHL20(2)  <------MYB83                                             <---------AHL20(2)                     <-- <---------AtMYB61                                         <---------AHL20(1)                     --- --------P                                                --------->YAB1                          --- ----->HSFB2a(2)                                    <---------ZAT6                               <--- -----LBD16    --------->YAB1                     <---------ZAT14                              ------ ----LBD16  --------->YAB1                    <---------------AtSPL8                           ------ ------HSFB2a(2)         <----------ID1      ------>ZmHOX2a(2)           --------->YAB1---------->DOF2   gggaaggtggcgaagaataagaatataagaacaaaacaaaatgttgatcgagtactcttaatataatatagacactcataactaagtcacaaagaaacat  10148800                                                 --------->O2                                                 <---------O2                                                 --------->TGA1a                                                 <---------TGA1a                                                 ==========================================bZIP_DOF                                                 <---------ANAC46                                                <-----------------------TaNAC69(2)                                              <------ZmHOX2a(2)                                       ----------->HVH21                                      <-------MYC3                                      ------->MYC3------->MYC3                                     <---------ANAC46                                     ======================bZIP_bZIP                                     --------->O2<---------ANAC55(2)                                     --------->TGA1a                                     --------->ANAC55(2)                                     <---------ANAC55(2)                               <---------WOX13(1)----------->GT1                   --------->ATHB51  <---------O2--------->ANAC55(2)                   <--------ATHB1    <---------TGA1a      ----------->HVH21<-----------HVH21  <---------WOX13(1)        --------->ANAC46 -------ANAC55(2)  <---------ICU4    --------->bZIP60(2)     --------->At4g35610 ------>ANAC46     -------->HAHB4<-----------HVH21<-------MYC3    <---------At4g35610 ------>ANAC55(2) <---------AHL20(2) <---------bZIP60(1)     --------->ZAT2 ----TEIL         <---------ATHB51 <-------------DYT1       --------->ANAC58                 -------- --->TOE2(2)      --------->AHL20(2) --------->bZIP60(1)    --------->ANAC58    <----------DOF2 --->TOE1(2)----------->GT1  --------->ATHB12<-----------HVH21    --------->At4g35610   <---------MYB46(3)   acgtctctgtgactgtgtaaataattgtcagtgattgtcacgtgatggatcacgtgaaacacaagctcaccagacaccagggcttttcatttgttacaac  10148900                                                                                   ---------->DOF2                                                                                 <---------YAB1                                                                           --------->ATHB12         -  <-------TEIL                                                            <---------YAB1         <--- --------->AtLEC2                                                      <---------AHL20(2)        ---- ->REM1(1)          <---------ICU4         <---------GLK1(2)          --------->AHL20(2)         <---   aacatgcatagtttaagacccattattctcaaataagatggaccagattagtcatttgtgatttggctccaattttatgatttataaaagagttgggagt  10149000                                                             <---------ZAT14                                                             --------->ZAT14                                                      --------->MYB46(2)                                                      --------->MYB111(2)                                                      --------->MYB111(1)         ----------->GT1                              <---------MYB46(3)         <---------MYB46(3)                          <--------P    --------->AHL20(1)                              <---------MYB52(1)    --------->ARR11(3)                             ------------>MYB.PH3(2)    <---------ARR11(3)                           <-----------RAV1(2)    <---------AHL20(1)                          <------ZmHOX2a(2) -------->ANAC46         <------MYB83          --------->ARR14(2) ------ZAT18             <------MYB46(1)       <---------ARR14(2)              ------------>CBF     < ----->ZAT18            <---------MYB46(3) <---------At4g35610    --------->At4g35610      <---------MYB46(3) ------ZAT14       <---------YAB1------->TEIL <------ZmHOX2a(1)   <---------At4g35610   <----------DOF2   ccacaaaatattggttatattgtgagtgggtaatggatgttgttcagaggatcaggtagttagtactctgctgttttaaaatccaatagactttggttaa  10149100                                    ---------->DOF2                             --------->SPL7                         <---------TOE2(3)                       <-----------GT1                                                        -------                  <-----------------AGL3                      <---------DAG2             <---------ANAC58      --------->AHL20(2) <---------TOE1(3)       --------->AHL20(2)                      <---------ANAC46      <---------AHL20(2)<---------At5g28300      <---------AHL20(2)                      <---------ANAC58  ----------->GT1 ----------------->AGL3   <---------MYB59  ------>NtERF2     ----------->GT1 <------ ------------CBF  ----------------->AGL2*TSS    --------->AHL20(2) <-----------GT1 <---------AHL20(2)   caaattgtttaaatcacaaaaccatttacggttcgaccgaaagaaccgaattttattctctctgccttatcacctctgagtggaaaaaattgagtgagcg  10149200                  ---------->DOF2               <---------HSFB2a(2)               --------->HSFB2a(2)              <---------ANAC46         --------->ARR11(3)           --------->ANAC58                 <---------DAG2       <--------         <---------ARR11(3)       >>>>>>>>>TBF1           <---------ANAC58    ------>ZmHOX2a(1)      <------ZmHOX2a(1)  >>>>>>>>>TBF1--------->ANAC58    <---------ANAC58   --------->TOE2(3) -->At4g35610 <---------LBD16  >>>>>>>>>TBF1<---------WRKY18(1)        <----------DOF2      <-------- ---At4g35610<---------LBD16>>>>>>>>>TBF1  ----------->HVH21      ---------->DOF2  --------->YAB1<---   ccattgtaggagagcttcgggaaagaagaagaagaagaagaagccatgaccatggctcttgcttcttctaaagctttttcctcaatcttcaatactttat  10149300                                                              ------>ZmHOX2a(2)                                                       --------->ATHB12                                                      --------->TGA2(2)                                                     <-----------TGA1              <----------DOF2                                                     <-----------HVH21            ------>ZmHOX2a(2)     --------->WOX13(1)                             <---------O2                 <---------YAB1   <---------ATHB12                                 --------->O2                <---------ARR11(3)  ------>MYB46(1)                                   --------->ANAC58            --------->ARR11(3)  ------>MYB83             <---------ANAC58         --------->ANAC46          <---------YAB1 --------->WOX13(1)        <---------ANAC58         --------->bZIP60(2)     <---------ICU4 -DAG2                    --------->At4g35610       --------->ANAC58      --------->GLK1(2) --DOF2<---------ATHB12   <---------At4g35610      <-----------STF1   >>>>>>>>>TBF1================== --------GT1         <---------ZAT6        <---------ATHB12--------->ATHB12 --------->YAB1   caccaatcaatcagtcgaaatttgtgttagcttgctctggttcaaatcatgtagacgtcattgatcggagaagaagaatcatgatctttggctcgagttt  10149400                <---------AtLEC2               --------->ZAT2               <---------ZAT2--------->MYB52(1)     --------->ANAC46        ----------->RAV1(1)     <---------O2           --------->YAB1     <---------TGA1a       --------->MYB46(3)       --------->LBD16     --------->bZIP60(1)   <---------ATHB12        --------->ANAC58                              <---     --------->TGA1a      --------->ANAC46         --------->ANAC58                        <---------ANAC58     --------->O2  <------MYB46(1)                 --------->ANAC46                        <---------ANAC58     ===================================MYC_MYB   <---------LBD16                        --------->ARR11(3)  ----------->HVH21<------MYB83 ------->GAMYB   --------->ARR14(2)             ---------->DOF2 <----- ==============bZIP_DOF  --------->WOX13(1)     <---------ARR14(2)       ---------->DOF2 <---------ARR11(3)   ggctctcacgtcgtctctgcttggttccaatcaacagagacttccgatggaatccgcaatcgcattggagcaattcaaagaaaaagaagaagagcttgag  10149500                                                                                        <---------AHL20(2)                                                                                       <---------AHL20(1)       ----------->GT1         --------->ARR14(2)<----------DOF2                       <---------AHL20(2) >>>>>>>>>TBF1              <---------TOE1(2)    <---------DAG2                        --------->AHL20(2) ---ZmHOX2a(1)              --------->LBD16 ---------->DOF2                ---------->DOF2      <---- ----TOE2(3)      --------->WOX13(1)   <----------DOF2         ----------->GT1  --------->GLK1(2)   gaagaagaagagagaaatgtcaatctcttccaggttttgctctttgcaaagctttttgttttctctggtaacaaaaaaaaagaatccaatttttttgtct  10149600  Previous    Next  AGI:  At4g18360.1    Description:  (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative. similar to (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative [Arabidopsis thaliana] (TAIR:AT3G14420.1); similar to (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative [Arabidopsis thaliana] (TAIR:AT3G14420.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO40335.1); contains InterPro domain FMN-dependent alpha-hydroxy acid dehydrogenase, active Range:  from: 10145930    to: 10148693    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g18370.1    Description:  DEG5/DEGP5/HHOA (DEGP PROTEASE 5); serine-type peptidase/ trypsin. Identical to Protease Do-like 5, chloroplast precursor (DEGP5) [Arabidopsis Thaliana] (GB:Q9SEL7;GB:O49507;GB:Q93ZW5); similar to DEGP1 (DEGP PROTEASE 1), serine-type peptidase [Arabidopsis thaliana] (TAIR:AT3G27925.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40338.1); contains InterPro domain Peptidase S1 and S6, chymotrypsin/Hap; (InterPro:IPR001254); contains InterPro domain Peptidase S1C, HrtA/DegP2/Q/S; (InterPro:IPR001940); contains InterPro domain Peptidase, trypsin-like serine and cysteine; (InterPro:IPR009003) Range:  from: 10149140    to: 10151229    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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