Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                             --------->ALFIN1                                                                         <---------ANAC46                                                                         --------->ALFIN1                                                                        <---------MYB52(1)                                                                       --------->LBD16                                                                     <---------LBD16                                                                <---------TGA1a                                                                =====================================                                                                --------->TGA1a                                                                <---------O2--------->ZAT18                                                                --------->O2<---------ZAT14                                                                <---------ANAC58                                                                <---------ANAC58                                                                =====================================                                                                <---------TGA2(1)                                                                --------->TGA2(1)                                                                <---------bZIP60(1)                                                                <---------bZIP60(2)                                                            --------->MYB46(3)                                                            <---------MYB52(2)                                               ----------->GT1  --------->bZIP60(1)                                            --------->CCA1(2)  ----------->STF1                                            --------->ARR14(1)<---------TGA2(2)                                           --------->ARR14(2) --------->MYB52(1)                    <                                           <---------ARR11(3)------->GAMYB--------------->AtSPL8    <                      <---------TOE1(3)    <---------ARR14(2)----------->TGA1                    ====                      <---------TOE2(3)    --------->ARR11(3)=============MYC_MYB              <-----                  <---------At4g35610      --------->ARR11(1)----------->HVH21                 ------                  --------->At4g35610    ----------->ARR10  <---------MYB55(2)                 <-----                  <---------ZAT2       ===================================bZIP_DOF             ------             --------->ANAC46          ---------->DOF2     ----------->RAV1(2)          <------ZmHOX2a(1)            <---------LBD16          --------->ANAC58      --------->At4g35610     --------->AtMYB61<          --------->ETT(2)           --------->ANAC58      <---------At4g35610 --------->MYB46(3)<---   atcgggtctatgtctacgggagctaaggttattggagtcaagaaagatatggtgaaactccaactgacgtctccggtgtgtaccaccataggagagaagg  10128500           --------->O2           --------->TGA1a           <---------bZIP60(2)           <---------O2           <---------TGA1a           <---------ANAC58           <---------ANAC58           <---------ANAC46          <------NtERF2         <---------RAP2.6(3)         ------>NtERF2        --------->DEAR3(1)        ----------->HVH21      <---------At4g35610 <----------DOF2 ====================bZIP_DOF ===========bZIP_DOF =====MYC_MYB ---------ANAC46 ---------ANAC58                                               --------->MYB46(3) ====================MYC_MYB                                 --------->ARR14(2)                <----- ----HSFC1(2)                  <------NtERF2             <---------ANAC46               <----------DOF2 --->HSFC1(2)--------->ALFIN1<---------ANAC46     <---------GLK1(2)--------->AtMYB61 ------>ZmHOX2a(1) ----HSFB2a(1)               <---------ANAC58    <---------At4g35610              ------>ZmHOX2a(1) --->HSFB2a(1)  --------->ETT(2)               <-----------RAV1(2)--------->MYB46(3)<---------ALFIN1 ---------ANAC58<---------ETT(2)    <---------WOX13(1)<---------YAB1           ------>ZmHOX2a(1) -----P--------->DEAR3(2)    <---------ANAC58<-----------HVH21 <---------MYB55(2)<---------ALFIN1   ttgctttaagccgacgtgtcgataggcattggcgtctaattggtaagggtcagattatggctggaaccaccatcgatgttcctcctcctcctttctaatg  10128600                                              <-------MYC2                                              ------->MYC3                                              ------->MYC2                                              ------->MYC4                                     <---------ICU4                                    --------->ICU4 <----------DOF2                                    <---------ATHB51                      <---------ANAC58        <-------MYC3                <---------AHL20(2)  --------->AHL20(2)   <---------ZAT6     <---------ANAC58   <-----------GT1            <----------DOF2               ---   --------->ICU4 <------------CBF  <---------AHL20(2)           <-----------GT1     --------->AHL20(2) ----ATHB12  <-----------TBP      --------->YAB1------->TEIL <---------AHL20(2) ------------>CBF <---   aagtagtgatgagttttttatattgtttgcattcaaaaataattaacatgtgcctttgtatgtttaatcactttctttcgactacaatataaaactatat  10128700                                                             <---------ANAC55(2)                                                             <---------ANAC58                                                             --------->ANAC55(2)                                                       <---------ARR11(3)                 <---------TOE2(3)                     --------->ARR11(3)                >>>>>>>>>WRKY18           --------->ATHB51   <---------ANAC58          ----------->RAV1(1)             <---------ICU4   <-----------GT1          <---------AHL20(2)       --------->ZAT6                  --------->YAB1 --------->YAB1        <------ZmHOX2a(1)       --------->ANAC46   --------->AHL20(2)        <---------TOE2(3)     --------->MYB59 <---------YAB1     <-----------GT1      <---------AHL20(2)     <---------YAB1<---------ICU4       --------->AHL20(2) ------>YAB1 <------------CBF         <-------TEIL --------->YAB1 --------->ZAT6<---------AHL20(2) ----TEIL--------->ANAC46--------->AHL20(2)     --------->TOE2(3)<---------YAB1 --------->AHL20(2)   tcatatttaacacaacattgacgaaaatttaaaaaacaaattcataatttcattaatgatattacttatcactaattaggaattatataattctaattcc  10128800                                                                                       <------MYB46(1)                                                                                       <------MYB83                                                                                    --------->CCA1(2)                                                                                    --------->ARR14(1)                                                                                   --------->ARR11(1)                                                                                   --------->ARR11(3)                                                                                   <---------ARR11(3)                                                                   ------------>CBF<---------ARR14(2)                          <-----------GT1                --------->ZAT14 ------------>CBF                        <----------DOF2                  <---------ARR14(2)        --------->ARR14(2)            <----------DOF2                              --------->ARR14(2)       <---------HSFB2a(1) ------>ZmHOX2a(1)     <---------ICU4         --------->At4g35610<----------DOF2 ----------->ARR10   ctcctcgttctgagcttttgtttcatctttacgctctctcttactctcagccaaaaccctatactctctttcaatcccaatggaagatttggttttgatg  10128900                                                                   --------->YAB1                                                                   <---------ICU4                                                                  <---------YAB1                   <-------TEIL                                 --------->YAB1             ---------->DOF2                                    <---------ICU4                   ----          <---------HSFB2a(2)                          <---------At4g35610         --------->ANAC58          --------->HSFB2a(2)                          --------->At4g35610         --------->ANAC58   <---------GLK1(2)                                ------>ZmHOX2a(1)           <---------ATHB12<----   aaacagagtcttctaaaaagcttcatcgtctctcttattctcactctcgtcttcctcatctcaccatcatcatcatcttcgaatcaagaaacaagagtat  10129000                                                 ------>MYB83                                               --------->AtMYB61                                               --------->MYB46(3)                                           <---------ZAT18                                           --------->ZAT14                                           --------->ABI4(1)                                  <---------ANAC55(2)                          --------->MYB52(1)   <---------MYB111(1)                          ------------>AtMYB77 <---------ALFIN1                       --------->TOE2(3)  --------->DEAR3(1)             ------>NtERF2        <------                    <---------CCA1(2)    --------->ANAC46               <---------ALFIN1     <-------                 <---------HSFC1(2)     <---------At5g28300          --------->ANAC58     -----------                 <---------At4g35610   <-----------GT1               --------->ANAC58     --------->MYB52(1)                 --------->HSFC1(2)   --------->MYB46(3)       --------->ANAC58 --------->ARR11(3)            --------->ANAC58      --------->ANAC55(2)     --------->REM1(1)  <---------MYB52(1) ----->YAB1 --------->ANAC58   --------->ARR14(2)------>MYB46(1)     --------->ANAC46   --------->MYB46(3) -----YAB1--------->MYB52(1)   <---------ARR14(2)-------->P    --------->ANAC58<---------CCA1(2)   catcaacacaaaaaacggaagcttatctcaacggttacgaatcaccgcaccaactcgtctacatcaagaaaacgacaccgtttatcttgaaccagcggtt  10129100                     <------NtERF2                   <---------DEAR3(1)                  <------NtERF2                <---------DEAR3(1)          --------->AtMYB61          ------->GAMYB                                                   --------->LBD16         <---------MYB52(2)                                      <-----------HVH21   <---------ICU4         --------->MYB46(3)                                      <-----------TGA1   <---------YAB1 -GAMYB  <---------MYB55(2)                         >>>>>>>>>>AtTINY2    --------->DEAR3(1)   ------>NtERF2 --MYB46(3)  --------->DEAR3(1)--------->YAB1       --------->ETT(2)     <---------ANAC46  --------->ZAT2 ->AtMYB77<---------ALFIN1    --------->MYB46(3)    <---------ETT(2)  --------->DEAR3(1)   <---------ZAT2   gcaacgagacaaccaccgtcgtcgtcgttacaatcaccaatactactactactatcgacatactcttcgtcatcgccgtggtcttcatcatcgtgctggc  10129200                                                                                   <---------ANAC58                                                                                   <---------ANAC58                                                                                <---------ARR14(2)                                                                                --------->ARR14(2)                                                                     <---------ANAC58 --------->SPL7                                                    --------->ARR14(2)          <---------GLK1(2)                                             ----------->HVH21     <---------YAB1 <---------------AtSPL3                                      <---------MYB52(1)        <---------ARR14(2)--------------->AtSPL3                                     <-----------HVH21          <---------MYB52(1)--------------->AtSPL8                           ----------->GT1  --------->SPL7      --------->ARR14(2)<-------TEIL                          <------------MYB.PH3(1)   <---------ARR14(2)     ---------->DOF2                        --------->MYB52(1) --------->ARR14(2)  <-------GAMYB   <------ZmHOX2a(1)-----                        <-----------GT1--------->SPL7   <----------DOF2  --------->HSFB2a(2)  <------                  --------->YAB1 <-----------GT1    <---------ARR11(3)   <---------HSFB2a(2)------>ZmHOX2a(1)       <---------YAB1--------->YAB1  <---------SPL7<------ZmHOX2a(1) <---------ANAC58 ------->TEIL <-   tacttcaagatgatggccaagaagaataacggtttaaaccgtccggttcgacaggatactttctcggttatgcttcccaaaggattcgtacctccttccg  10129300                                                                                             --------                                                                                             <-------                                                                                             <-------                                                                                             <-------                                                                                             <-------                                                                                            <--------                                                                                            ---------                                                                                        <------------          ----------------->AGL1                                                      --------->ANAC55(2)        --------->ANAC58                                                             <-------TEIL        --------->AtLEC2                                                           --------->ARR14(2)        --------->ANAC46                                          ------->GAMYB    <---------ARR14(2)        --------->ANAC58                                      --------->ANAC46     <---------MYB52(1)  --------->At4g35610          --------->ANAC46     <------ZmHOX2a(2)             <---------RAP2.6(3)  <---------At4g35610  --------->TOE2(3)    <----------DOF2 --------->ANAC46    <---------ANAC46 ---->LBD16         --------->ARR14(2)--------->ZAT14------>ZmHOX2a(2)  <---------GLK1(1) <---------SPL7 ---LBD16 ----------------->AGL2<---------At4g35610<---------ARR11(3)  <---------ARR11(3)--------->TOE1(1) ------TEIL<---------------AGL15--------->LBD16    --------->ARR11(3)  --------->ARR11(3)--------->TOE2(1)   gttcatctccatgccataaccagaaccctaattccgctactactctcttttgcgatctttctacacaaccctagatatcgttgccgatacgtcgtacgtg  10129400  Previous    Next  AGI:  At4g18330.1    Description:  eukaryotic translation initiation factor 2 subunit 3, putative / eIF2S3, putative / eIF-2-gamma, putative. similar to EIF2 GAMMA (eukaryotic translation initiation factor 2 gamma subunit), translation factor, nucleic acid binding [Arabidopsis thaliana] (TAIR:AT1G04170.1); similar to Os12g0607100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067233.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN80178.1); contains InterPro domain Protein synthesis factor, GTP-binding; (InterPro:IPR000795); contains InterPro domain Translation elongation and initiation factors/Ribosomal, beta-barrel (InterPro:IPR009000) Range:  from: 10126590    to: 10128745    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g18335.1    Description:  unknown protein Range:  from: 10128880    to: 10129374    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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