Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         <---------MYB52(1)                      --------->TOE2(3)                     <---------ANAC58                                      <---------YAB1                     <---------ANAC58                          <----------DOF2    --------->TOE2(3)          <---------ICU4                                      ------>ZmHOX2a(2)   --------->TOE1(3)         <---------------AGL15                              <---------ARR11(3)  <---------TOE2(3)         --------------->AGL15                              --------->ARR11(3) <-----------GT1   --------->ZAT6    <---------ANAC46             --------->YAB1 <---------AHL20(2)     --------->TOE2(3) -----RAV1(1)  <---------TOE2(3)    <----------DOF2<---------AHL20(2)    <---------AHL20(2)   tgcaaactctactcattgtggtttcgttagaaactctactttggtttgtttataaaaatgctgatcttttattgtttatttttacgttaaacttaataga  10126200                                                                                 ----------->GT1                     <---------ZAT18                             <---------AHL20(2)                   --------------->AtSPL8                        --------->AHL20(2)           ----------------------->TaNAC69(2)                    --------->AHL20(1)      --------->ARR11(3)               <---------AHL20(1)       <---------AHL20(2)      <---------ARR11(3)         --------->TOE2(3)              --------->AHL20(2)      ----------->GT1  ---------->DOF2 <---------ANAC46<---------MYB52(1)   <---------AHL20(2)    ---------->DOF2   caaacaaagaactcttaattcggtgtacatctcttcgttaatatatgtaaaacatattttttttaaaaaaattgtttagcaaagagtaaaatgaaaaatt  10126300                                                                                                   <-                                                                                                   <-                                                                                                   <-                                                                                                  <--                                                                                               ------          <------------------------ANAC81                                                      <-----      --------->ARR11(3)                                                    <---------GLK1(2)<-------      <---------ARR11(3)                                               <-----------GT1      <--------  ---------->DOF2         ------>ZmHOX2a(1)                      --------->AHL20(2)        ----------   ctacaaaagatgttctcttatttggctcctctacaaaaaaaactcaactccgattacaaattcgagtttaaatttacaggttttcaatattgggccgtat  10126400                                                                                                -----                                                                                              -------                                                                                              <------                                                                                              <------                                                                                              <------                                                                                              -------                                                                                              -------                                                                                              -------                                                                                             --------                                                                                             <-------                                                                                             <-------                                                                                             ========                                                                                             -------- --------ANAC46                                                                              <------- --------ANAC58                                      --------->YAB1                          ======== --------ANAC58                                     <---------ATHB12                         ======== -------MYB46(3)       --------->YAB1         --------->DAG2                               <---------ALFIN1 --->ARR14(2)       <---------ICU4        <---------ICU4                                 ------>MYB46(1) ----ARR14(2)       --------->YAB1        --------->YAB1    <---------TOE2(3)            ------>MYB83 --RAP2.6(3)     --------->YAB1          <---------ATHB12 =========================================== -ANAC46        --------------->AGL15  --------->WOX13(1) ---------->DOF2           <-----------GT1 ------->AGL1<-----------GT1       ----------->GT1  ----------->GT1          --------->REM1(1)<------   tgggtgctaatggttttactaataataagaatgggcctagttaatcataaggcaatgaaaaaaaggtttacaaaaccctacattttttaccttccacgtg  10126500 ---->REM1(2) >MYC4 -MYC3 -PIF5 -MYC4 >PIF5 >MYC3 >MYC2 ->O2                                      --------->ZAT2 --TGA1a                       <-----------HVH21 --O2                <---------ARR11(3)    --------->At4g35610 ==================================bZIP_DOF<---------At4g35610 ->TGA1a             --------->ARR11(3)  <---------ZAT18 --ANAC46--------->LBD16<----------DOF2  --------->ZAT18 =====================================MYC_MYB =========================================MYC_MYB                                         *TSS ==bZIP_DOF  <---------ATHB12 ------->GAMYB<---------ZAT2       ---------->DOF2   --------->AHL20(2) -MYC2   ------------>CBF    <------------AtMYB77      <---------LBD16         --------->ATHB12   <--   taaacttcttccccaatcttacaaatctttaactgtcatcgagcgagctcaacatttttcggacaacaaagtgtaagagactgattaaacaaaatcgaga  10126600                                                 <---------ANAC46                                         <---------ICU4                                         -------->ATHB1                                         --------->ATHB12                                         --------->ATHB51                                        <---------AHL20(2)                  --------->ETT(1)      --------->ICU4                                              -          <---------TOE2(2)             <---------ATHB51                    <---------AtLEC2        -         <-----------RAV1(2)            <---------YAB1               <---------TOE2(3)<---------MYB52(1) --------DOF2    ---------->ID1    ----------->GT1    <---------ANAC46  --------->CCA1(2)<---------ANAC46   ctttatagtactcaggtttgtcggaatcgactgagtatcgaaattattgtggtgttttgtgaacagaaaccaaggtatgcatgaaatcgttttgtatata  10126700                                                                                                <----                                                                                               ------                                                                                              <------                                                                                              <------                              ------>ZmHOX2a(2)                                               <------                              =======================HOX2a_HOX2a                         --------->ALFIN1                            --------->ARR11(3)          ----------->GT1         ----------->HVH21                         <---------WOX13(1)        <---------TOE2(3)          --------->ANAC46<------                       --------->ATHB12           ---------->DOF2             --------->ANAC55(2) -------->TOE1(3)     <---------YAB1          <------ZmHOX2a(1)               <---------ANAC55(2) -------->TOE2(3)<---------GLK1(2)<---------MYB52(1)    <---------MYB46(3)  <---------ANAC46 <-------   aaccctaatatcgatttcagaattttcattgatctcgttgttttagcaggattaaagatggttcaatctgtgttaatttcgcgtaacaagggtttggcgg  10126800     ------>ZmHOX2a(2)     <---------MYB59    <------ZmHOX2a(2)    --------->CCA1(2)   <---------AGP1   --------->ARR14(2)   <---------ARR14(2)                                                 --------->YAB1   --------->AGP1                                                     --------->TOE2(3)   <-----------ARR10                                                  --------->TOE1(3)   --------->ARR11(3)                                                --------->MYB46(3)   <---------ARR11(3)                                           --------->ANAC58 --NtERF2                                                  --------->ANAC46 --->LBD16                                                 --------->ANAC58  --------->MYB52(1) ---DEAR3(1)                   <-------TEIL      --------->bZIP60(1)-------->P             --------->ANAC46 ---ANAC46                    <-----------GT1 --------->LBD16   --------->ANAC58       <-----------GT1 ---ANAC58                 ----------->GT1    ------>ZmHOX2a(1) --------->ANAC46 --------->At5g28300 ---ANAC58               ---------->DOF2    <---------ANAC46    --------->AtLEC2----------->GT1 --LBD16           <---------REM1(1) ------>ZmHOX2a(1)     --------->ANAC58 --------->RVE1(1)    <---   agcaagatctaactaagcttgatgtaacaaagttacatcctctgtttcctgaagtcatttctcgccaagcaaccataaatatcggtaaattacactctgc  10126900                                                                          --------->ATHB12                                                                         --------->MYB46(3)                                                                      <------ZmHOX2a(1)                                                                    <---------TOE1(2)         -------          ------>ZmHOX2a(1)                                        <---------LBD16           --------      <---------ARR14(2)                                       --------->ARR11(3)           ---------      --------->ARR14(2)                                       <---------ARR11(3)           ---------     <---------ZAT2                                           <---------CCA1(2)          ----------->HVH21     --------->ZAT2                                          <---------AHL20(1)        <---------At4g35610     --------->At4g35610                                     --------->ARR11(3)    --------->O2     <---------At4g35610                                     <---------ARR11(3)    <---------O2    ------>NtERF2                    ---------->DOF2         --------->AHL20(1)    <-----------RAV1(1) -------DOF2              <-----------GT1                   --------->AHL20(2) <-----------HVH21-----   ttttgccagctcctctaggtctatagtataacttgatgtcaaagaaaccaatactgtgctaaatatatctcaggaaccattggtcatgtcgctcacggta  10127000     --------->ZAT14     <---------ZAT14 -->At5g28300                                                                   <------MYB46(1)    -- --->GT1                                     <---------TOE2(3)                  <------MYB83      --- >ANAC58              <-----------RAV1(1)<----------DOF2                   <---------YAB1         <-- >ANAC58 <---------ZAT6               <---------ANAC58               <---------YAB1  --------->AtLEC2 ----->DOF2---------->DOF2            <---------ANAC58     ----------->GT1 <---------TOE2(3)    -----   aatcgactatagtgaaagctatctctggtgttcagactgtgcgttttaagaatgaattagagcgtaacattaccattaagcttggttatgcaaatgcaaa  10127100  Previous    Next  AGI:  At4g18330.1    Description:  eukaryotic translation initiation factor 2 subunit 3, putative / eIF2S3, putative / eIF-2-gamma, putative. similar to EIF2 GAMMA (eukaryotic translation initiation factor 2 gamma subunit), translation factor, nucleic acid binding [Arabidopsis thaliana] (TAIR:AT1G04170.1); similar to Os12g0607100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067233.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN80178.1); contains InterPro domain Protein synthesis factor, GTP-binding; (InterPro:IPR000795); contains InterPro domain Translation elongation and initiation factors/Ribosomal, beta-barrel (InterPro:IPR009000) Range:  from: 10126590    to: 10128745    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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