Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                      --------->ATHB12                                                                                    --------->ATHB51                                                                                   <---------YAB1                          --------->GLK1(1)                                      --------->YAB1                          <---------GLK1(1)                                      <---------ICU4                          <---------HSFB2a(1)                                   --------->ICU4                   <---------ANAC58      <---------ANAC55(2)                    <---------YAB1                   <---------ANAC58      <---------ANAC46             <-----------GT1                  --------->ATHB12    --------->DOF5.7(2)     <-----------GT1<---------YAB1 --->GT1      <---------ICU4          <---------MYB52(1) ----------->GT1   ----------->GT1   aaaacatttcatacaataaatgcttgggaaattcgaaaacgttacctatacaacttatatagttatactatataacattgttattattattgaagaatac  10103600                            ---------->DOF2                      ---------->DOF2             <---------------AGL15             --------------->AGL15            <-----------------AG            ----------------->AG            ----------------->AGL3            ----------------->AGL1                                 --------->AHL20(2)     <---------ANAC58            <---------------AGL15                                 --------->YAB1          <---------ANAC58            --------------->AGL15---------->DOF2               --------->YAB1             <---------ANAC46            <-----------------AGL3                            <---------YAB1           <---------AtMYB61            <-----------------AGL1                        <-------GAMYB                --------->ALFIN1            ----------------->AGL2                  --------->MYB52(2)             <---------YAB1---- <---------AHL20(2)  <------ZmHOX2a(1)<XXXXXXXXXXXXXXXXXXXXMIR782 --------->AHL20(2)--------->ATHB12 --------->AHL20(2)<---------TOE2(3)  <---------KAN4(2)  ----------->GT1     ---------->DOF2---------   gatataaattttgacccaaataaggaaagggaaagaaaagaatgtccaaagagttagtggggttataataaaaatagcacaaagcatgagtggtgtgact  10103700                                                                                    =================                                                                                    =================                                                                                    <---------TGA1a                                                                  --------->TOE1(3) --------->O2                                                        <---------YAB1========================bZIP_DOF                                                       --------->AHL20(2)    --------->ARR14(2)                           XXXXXXXXXXXXXXXXXXXXX>MIR2936<---------AHL20(2)   <---------ARR14(2)                         --------->TOE1(3)             <---------AHL20(2)    <---------GLK1(2)      --------->ZAT6     --------->TOE2(3)      --------->DREB2C(2)   ---------->DOF2        -------- ------->GT1   --------->ETT(2)---------->DOF2 --------->MYB46(3) --------->TOE2(3) <---------O2 -->HVH21      <---------MYB46(3)              --------->DEAR3(2)--------->ZAT6     --------->TGA1a   cgttactaatactatggtcgatggaagccttaaaaaagataacacagaaaccgacattttaattctaaccctaaaatcggattctcacatgtctgaaaag  10103800                     <------------MYB.PH3(2)                     <---------MYB52(2)            <---------ARR14(2)         --------->ANAC58         --------->ANAC55(2)         --------->ANAC58         <---------ANAC55(2)       --------->MYB52(1)                                                           <---------AHL20(2)      ----------->HVH21                                                           <---------RVE1(1)    <---------At4g35610                                                          <---------GLK1(2)<--    --------->At4g35610                <-----------GT1                           --------->ARR11(3) ===bZIP_DOF<---------GLK1(2)      <----------DOF2                               <---------ARR14(2) =================================MYC_MYB    ---------->DOF2 <----------DOF2     --------->ARR14(2) -->DOF2<---------LBD16       ------>ZmHOX2a(1)        <---------AHL20(2)        <---------ARR11(3)--   agagacatctcacggattgtgtcactaacttcctctcctttttacttaaaagcatttttaattctttttggcattcacttgcagattttttttcattaga  10103900                                         <---------ANAC55(1)                                         <---------ANAC46                 --------->YAB1          --------->ANAC55(2)            <---------YAB1               <---------ANAC55(2)            --------->ICU4    <---------ANAC58          -------->HAHB4      <---------ANAC55(1)          --------->YAB1      --------->ANAC55(2)         --------->ICU4       <---------ANAC55(2)          <---------ANAC58       --------->YAB1         <---------ANAC58         <------------CBF    --------->ANAC55(2)      <-------TEIL<---------ANAC58  <---------ANAC46    <---------ANAC55(2) --------->AHL20(2)         <---------ZAT6                                 --- -----TEIL<---------ICU4<---------AHL20(2)       <---------ANAC46 ---------->DOF2           <-------- ------->YAB1    ----------->GT1         <---------ANAC58  <---------ANAC58          ------>NtERF2<--   ttcatcacataataatgaatagtaaaataaatacgtgtctaatgcgtgttctcgtgttattgcgtctataaagtcttaacgagatgaggccttagagtaa  10104000          <---------CCA1(1)          <---------RVE1(1)                                         ------>ZmHOX2a(1)         --------->ARR11(3)                              --------->YAB1         <---------ARR11(3)                              <---------ICU4 ------>ARR11(3)                                        <---------ATHB12                          <-- -ZAT6 *TSS                                             --------->ICU4                         <----- -------ARR11(3)     <------ZmHOX2a(1)                  <---------ATHB51          <---------MYB52(1)   gaacttaaacagatatttcataaggaaaatgaagggtgagtttttcacattgatggcaataatgtctctcctcttagccttctcgttagtccatggagga  10104100                                                      <------ZmHOX2a(2)                                                      <<<<<<<<<<<<<<<<<LFY                                                     --------->ARR14(2)                                                     <---------ARR14(2)                                   ------>NtERF2     --------->ARR11(3)                                  --------->LBD16   <------ZmHOX2a(1)                              -------->P           <---------HSFC1(2)                             <---------ALFIN1      --------->HSFC1(2)                       <--------                           --------->At4g35610     <---------HSFB2a(1)                 ------>MYB83                           <---------At4g35610     --------->HSFB2a(1)               <---------MYB59                          --------->RAP2.3(2)  ------->GAMYB                        <----------------          <---------ALFIN1--------->ANAC46    --------->DEAR3(2)           <---------At4g35610  -----     --------->HSFB2a(2)  --------->RAP2.6(2) --------->MYB46(3)     <---------MYB46(3)------>MYB46(1)     <---------HSFB2a(2) --------->RAP2.3(1) ------>MYB46(1)<---------MYB46(3)     ------->TEIL------  --------->GLK1(2)     --------->At4g35610  ------>MYB83  --------->ALFIN1--------->At4g35610 <----- ----ZmHOX2a(1)         ------>NtERF2        -------->P------>ZmHOX2a(2)   <---------ZAT2  <---------LBD16 -ZmHOX2a(1)            <---------At4g35610 --------->MYB52(1)      --------->ALFIN1-----------------   ggagagtctggaacaccttctaatgcagccgctaccccgactagcccaaccgaaggatccagtggttcaagtggttcagctcatggacctaattggggat  10104200                              <-------GAMYB                             <---------MYB46(3)                            --------->ALFIN1                          <------MYB83                         --------->ALFIN1                         <---------DEAR3(1)    <---------ANAC46   <---------MYB52(1)                                               <---------GLK1(2)   <---------LBD16    --------->LBD16                                          --------->DAG2     <-- -ANAC46             --------->LBD16                                          --------->DAG2      <-- -AGL1               <---------LBD16                           <-----------RAV1(2)      --------->ARR14(2) ---->CCA1(2)       <---------LBD16                           <---------At4g35610       <---------ARR14(2) --->ARR14(2)    <---------At4g35610                      <-----------HVH21  ---------->DOF2      <-- ----ARR14(2) <-------TEIL<------MYB46(1)                --------->MYB52(2)<------ZmHOX2a(1)     ---- >AGL1  --------->ALFIN1 <---------AtMYB61              <-------TEIL    <------ZmHOX2a(1)        <---   atagttggggatggggttcagccccgggaggtggttatggctatggttctggttcgggttcgtcaccagatggaggaggaaaaggggctggattcgggtt  10104300                                                                                             --------                                                                  <---------ARR14(2)         --------                                                                  --------->ARR14(2)      --------->ARR14(2)                                                  <------ZmHOX2a(1)                     ----------->HVH21                                                  --------->ATERF1(1)               --------->TCP20        <-----------RAV1(2)                     --------->ALFIN1--------->MYB55(2)  <---------PCF5      <-----------HVH21 <---------ARR14(2)     <------ZmHOX2a(1)--------->ABI4(2)   <---------PCF2  <---------LBD16       --------->ARR14(2)   --------->ALFIN1   <---------MYB46(3)  --------->TCP15(1) ----MYB83        --------->ARR14(2)        <------ZmHOX2a(1)  --------->ALFIN1     --------->TCP16(1) ----MYB46(1)     <---------ARR14(2)      --------->ALFIN1    <XXXXXXXXXXXXXXXXXXXXMIR842 <---------ARR14(2) -------MYB46(3) <------ZmHOX2a(1)    <---------LBD16       <---------DEAR3(1)     ----------->HVH21 ----->MYB59 <-------TEIL           <---------ANAC58    <-----------RAV1(2)      --------->ALFIN1  <- ------AtMYB61<-----------RAV1(2)   <---------ANAC58  ----------->RAV1(1)  --------->AtLEC2  --------   tggttcggggtcaggttcaggaactggatttgggtctggctcgggaggaggaggagccacagacggtggttctggccatggaagtgggaccggacacgct  10104400                ===========================HOX2a_HOX2a                <------ZmHOX2a(1)             <-----------RAV1(2)         ------>ZmHOX2a(1)        <---------DEAR3(1)             ----------->RAV1(2)        --------->ALFIN1             ------>ZmHOX2a(2)       <------NtERF2                 ==========================HOX2a_HOX2a       <-------GAMYB                <---------GLK1(1)       --------->ATERF1(1)          --------->GLK1(1)      <---------ATERF1(1)           ===========================HOX2a_HOX2a      <---------ORA47(2)            <------ZmHOX2a(2)      <---------DEAR4(2)           <---------ARR14(2)                                        <-------      <---------MYB46(3)           --------->ARR14(2)                                       <--------     <---------DEAR3(1)            --------->ARR14(3)                                     --------->YAB1     <---------DREB2C(2)           <-----------ARR10                                      <---------ICU4     --------->ALFIN1              --------->ARR11(3)                                    --------->ICU4 ->ANAC46 <------NtERF2            <---------ARR11(3)                                    <---------YAB1 ->ANAC58<---------MYB46(3)       <------ZmHOX2a(1)                    ---------->DOF2<---------YAB1 --------REM1(1)============================HOX2a_HOX2a        <---------ALFIN1   <---------ANAC58 -- ->ANAC58------>NtERF2       <---------REM1(1)          <------ZmHOX2a(1)         <---------ANAC58 --   ggtgaaggcggtggctcaggaagtggaaatggtgaaggatctcctggtcgtagagagaggagccaacaccgctaaaagaagttttcttgttattattact  10104500  Previous    Next  AGI:  At4g18280.1    Description:  glycine-rich cell wall protein-related Range:  from: 10104007    to: 10104744    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version