Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                <------                                                                                            ---------                                                                                         --------->YAB1                                                                                         --------->ATHB51                                                                                         -------->ATHB1                                                                                         <---------AHL20(2)                                                                                         <---------ICU4                                                                                         <--------HAHB4                                                                                         -------->HAHB4                                                                                        <---------ATHB51                                                                                        --------->ICU4                                                              --------->ATHB12          <---------YAB1                                                              --------->ATHB51        --------->YAB1                                                          <---------YAB1              <---------ICU4            --------->ZAT18                               --------->AHL20(2)         <---------AHL20(2) ------->MYC2                                             <---------AHL20(2)         --------->AHL20(2) <-------MYC2                                          <---------ARR11(3)           <---------YAB1 <-------MYC3                                          --------->ARR11(3)        <---------AHL20(2) ------->MYC3           <---------At4g35610            --------->AHL20(1)        --------->AHL20(2) -->At4g35610           --------->At4g35610        ----------->GT1      --------->At4g35610<---------YAB1 >AGL15     <---------ZAT18                --------->GLK1(2) <---------YAB1      <---------YAB1     -   gcatgtgtaatgtgtgcaatctagtaatctgaaatagaataacaaaatcggtctggatatattattattgaagaagatgccatattattaattattataa  10055300                                                                                                    <                                                                                                    -                                                                                                    <                                                                                                   <-                                                                     <---------ANAC58              --              <---------AHL20(2)                                     <---------ANAC58            ---- ---YAB1     --------->AHL20(2)              <---------YAB1 <---------AHL20(2)                   <--- >YAB1       <---------AHL20(2)            <-------TEIL   <XXXXXXXXXXXXXXXXXXXXMIR822           ----- --------->DOF2                ----------->GT1        --------->YAB1 <---------ANAC46           <----   aaaaaagatgccatattaattttaaaaaatagcatgttatataggttcttatagtatcatatgtaaatgtttcttgttttttgtgcaaaccgcatcaaat  10055400    <---------AHL20(2)   <---------AHL20(2)   --------->AHL20(2)  <---------YAB1 --------HAHB4 -------->ATHB51 ---------ICU4 --------YAB1 ------->ICU4 ----->YAB1                                                 --------->ANAC58           <---------At4g35610 ------ICU4                    <---------GLK1(1)            --------->ANAC58       --------->ARR14(2) ---->ICU4------->TEIL   --------->TOE2(3)     --------->TOE2(3)                   <---------ARR14(2) -----ATHB12          <-----------GT1         ----------->GT1            ---------->DOF2            -   cattattaaatgaatatcagtatataacctttgatttctctctaaaaaatgttaatagccacaagaaaaacttaagaaagcgccatttctgcttcttctt  10055500                                                         <-------MYC3                                                         ------->MYC3                                                        --------->TGA1a                                                        <---------TGA1a                                                        --------->O2                                                        <---------O2                                                        ====================================bZIP_DOF                                                       <---------TOE1(2)                                                       <---------TOE2(2)             <xxxxxxxxxxxxxxxxsmallRNA(s)      <----------DOF2           <---------ANAC58                    <---------DAG2<-----------GT1           <---------ANAC58                    ===================bZIP_DOF       <----------DOF2              --------->DAG2    <---------ALFIN1  ------>ZmHOX2a(1)     -------       ------>ZmHOX2a(1)           ===============================bZIP_DOF       <----------DOF2 ----------->CBF                   ---------->DOF2 <-----------GT1   ------>ZmHOX2a(1)  ------>ZmHOX2a(1)   acttcaatcctttgcgagagagagagagagagagagataaagtttcttcctttttcccacgtttcacgttcctcctcttacctctttctccttcgcttca  10055600                                                       <---------ATHB51                                                      <---------MYB52(1)                                              <----------DOF2             --------->YAB1                                             ------>ZmHOX2a(2)       ------------>CBF             <--                                            <------ZmHOX2a(2)       --------->TOE2(3)            ----                          >>>>>>>>>>MYB80  <---------ARR11(3)       --------------->AGL15        ----                      <------ZmHOX2a(2)    --------->ARR11(3)  <---------MYB52(1)               <---- ----->CBF      <----------DOF2        --------->MYB52(1)     <---------At4g35610              <-----   atcccttcaagtttcagtctttagatcaaaccaaaaaaaaaaaacgatctttttccgataattcagttaacttcaatcggaaaaccatttccagttttcc  10055700                                                                                  <---------------AGL15                                                                                  --------------->AGL15         --------->MYB52(1)                                               --------->At4g35610        <---------WRKY38(1)                                               <---------At4g35610        <---------WRKY12                         --------->LBD16       --------->At4g35610 -------------------WRI1                <---------YAB1                 --------->ZAT2 -->NtERF2                              --------->ICU4 ----------->GT1 <---------ZAT2   --------->HSFB2a(2) ----->LBD16              <----------DOF2--------->ATHB12              <---------At4g35610      ----- -----LBD16         ----------->HVH21 <---------ANAC55(2)          <---------ALFIN1     <---------HSFB2a(2) ----LBD16 <---------MYB52(2)         --------->ANAC55(2)       --------->AtMYB61----------------->AGL1   ggcgagatggccaacgaaggaagtgaccctttacttcaatacatgattagcccgagattgaaaaaacctccacagctgctgtttccattaccagaagaca  10055800                     ----------->HVH21                   <---------At4g35610                   --------->At4g35610                                             <-------TEIL             --------->At4g35610                                                 --------->ARR14(2)             <---------At4g35610                                                 <---------ARR14(2)         <---------ARR14(2)                 ----------->GT1                 --------->LBD16         --------->GLK1(2)            ---------->DOF2                       <------NtERF2         --------->ARR14(2)       --------->GLK1(1)                        --------->DEAR3(1)      <---------ANAC58      <-----------HVH21                 <----------DOF2    <---------GLK1(2)      <---------ANAC58     --------->DEAR3(1)         <---------LBD16     <---------LBD16 ---->MYB52(1)  ------>NtERF2   <------NtERF2         --------------->AtSPL8------>NtERF2   acgaagttgcgattccgatgccgatgacaccgtcggagttcaaagagcgtttaatcttcggacccttttcatgttcgccgcgagattcgtctcacttcat  10055900                                                                            ------>ZmHOX2a(2)                                                                           <------ZmHOX2a(2)                                                                          --------->ARR14(2)      <--                                                                          <---------ARR11(3)      ---                                                                          <---------GLK1(2) ---------                                                   ------>ZmHOX2a(1)      <---------ARR14(2)---------                                                   ================================HOX2a_HOX2a  -----                                                   ===============================HOX2a_HOX2a  ------                    --------->DEAR3(1)        --------->YAB1              --------->AGP1   --------->MYB46(3)               <-----------TGA1            --------->YAB1                 --------->ARR11(3)<--------               <-----------HVH21         <---------MYB52(1)             ----------->ARR10<---------ALFIN1              --------->ANAC46          <-------GAMYB                ------->GAMYB       --------->AtMYB61              ------->GAMYB             --------->At5g28300       <---------ALFIN1       --------->DEAR3(1)             --------->MYB46(3)        ----------->GT1          ===================HOX2a_HOX2a <-----             <------------AtMYB77   --------->DEAR3(1)          ==================HOX2a_HOX2a -------           --------->MYB52(1)       ------->GAMYB<---------ICU4 ------>ZmHOX2a(1)       --------->MYB46(3)          --------->MYB46(3)       --------->DEAR3(2)          --------->TOE2(3) --------->At4g35610     --------->AtLEC2              --------->MYB46(3)       <---------ARR14(2)   <---------At4g35610-     --------->ANAC46              <---------MYB55(2)       --------->ARR14(2)------>ZmHOX2a(1)------   cgattccatgaaacaaccgtcaccgtcgtcttcttcaaccgccgttaataatcctttctccgattcctcaaccctagatcctctgcttccaccaccacca  10056000 -------ALFIN1 ------>AtMYB61                                                              --------->ANAC58 >DEAR3(1)                                                                   --------->ANAC46 >AtMYB61                                                                    --------->ANAC58      -- ------>RAV1(1)                                                <------ZmHOX2a(2)                   == --->DEAR3(1)                                     --------->ANAC58        ----------->RAV1(1)    ---- -ALFIN1                                          <---------ALFIN1      --------->At4g35610      <--- ----ALFIN1                                       --------->ANAC58   ---------->DOF2            ----- -->MYB46(3)                                 --------->ANAC46 <---------ARR14(2)               <----- -------->MYB46(3)     <------ZmHOX2a(2)<-----------HVH21     --------->ARR14(2)           <---------YAB1 --->AtMYB61     <---------SPL7      <---------At5g28300    --------->DEAR3(1)             <---------ATHB12   ccacaaccagagccatggttgtccgatcaaacttcgagtcactgtcaaggccacgctcttcaccgatccaaaacagcaccagcaatggctgtaatcaatg  10056100                                      --------->TGA2(2)                                     <-----------HVH21                                     <-----------TGA1                                    --------->bZIP60(2)                                    --------->TGA2(1)                                    ====================================bZIP_DOF                                    <---------TGA2(1)                                    --------->bZIP60(1)                                    --------->TGA1a                                    <---------bZIP60(1)                                    <---------TGA1a                                    <---------O2                                    --------->ANAC55(2)                                    <---------ANAC55(2)                                    --------->O2                                    --------->ANAC58                                    --------->ANAC58                                    --------->ANAC46                            ========================HOX2a_HOX2a                            =======================HOX2a_HOX2a                            ------>ZmHOX2a(1)                          ------>ZmHOX2a(2)       --------->ANAC58  <------ZmHOX2a(2)       --------->ANAC46 --------->ARR14(2)   ------>ZmHOX2a(2)       --------->ANAC58 <---------ARR14(2)  <------ZmHOX2a(2) ---->ZmHOX2a(2)        --------->ARR11(3) --------->ARR14(2)                    ------->TEIL ==================================HOX2a_HOX2a            --------->ANAC58      <---------CCA1(2) ----->ARR11(3)         <---------ARR11(3) <---------ARR11(3)                 <---------ANAC58 ------ARR11(3)        --------->RVE1(1)   <---------ARR14(2)<----------DOF2  <---------ANAC46 ---->YAB1          ---------->DOF2<-----------STF1  <----------ID1           <---------ANAC58    <-- ----ATHB12         ==========================bZIP_DOF    --------->ANAC58 <---------MYB52(1)     <--   atcttcatcacccaattcgtcaaaaagatcctacagagacgtcacgatctgtagtaagacaagcttttgctcttctcgttgtgtatctctctctaggtgt  10056200  Previous    Next  AGI:  At4g18160.1    Description:  KCO6 (CA2+ ACTIVATED OUTWARD RECTIFYING K+ CHANNEL 6); outward rectifier potassium channel. Identical to Probable calcium-activated outward-rectifying potassium channel 6 (KCO6) [Arabidopsis Thaliana] (GB:Q9SVV6); similar to KCO2 (CA2+ ACTIVATED OUTWARD RECTIFYING K+ CHANNEL 2), calcium ion binding / outward rectifier potassium channel [Arabidopsis thaliana] (TAIR:AT5G46370.1); similar to TPK1 [Nicotiana tabacum] (GB:ABX60975.1); contains InterPro domain Potassium channel, two pore-domain; (InterPro:IPR003280); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048); contains InterPro domain Ion transport 2 (InterPro:IPR013099 Range:  from: 10055707    to: 10057747    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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