Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                           <---------TOE2(3)                                              ---------->DOF2       ------>ZmHOX2a(1)         ----------->HVH21                  <------ZmHOX2a(2)<-----------GT1   <---------ANAC58 --------YAB1                               ===============================HOX2a_HOX2a ---->GLK1(2)                     <---------RVE1(1)         <-----------GT1    <---------ANAC58    <- ---->ICU4     ---------->DOF2   <---------MYB52(1)    ------->TEIL--------->TOE2(3)          <------   tctgagtagcagtgaccaaaagttccattctctccgatattttgggatcaaagcatgaatttttaacatccttatgaggtttcttacaaacaccaagaac  10049000                         --------->ARR11(3)                        <---------CCA1(2)                                          --------->At4g35610                      <---------ANAC58                                             --------->ZAT2                      <---------ANAC58                            <---------HSFB2a(2)                   ------>ZmHOX2a(1)                              --------->HSFC1(1) ---------DOF2    <---------ANAC58            <---------ICU4      <---------HSFC1(1) ---ARR11(3)      <---------ANAC58       <-----------------AGL1   --------->HSFB2a(2)    ---------->DOF2   tcttttctctcttaacgagtccttgcttatcttgctcttcattttcaaaaatggcattggcatagtctctagaaatacaacaacaagctgcaaaagaaat  10049100                                                                                         ----------->HVH21                                                                                      ------>ZmHOX2a(2)                                                                                      ===============                                                                                     ================                                                                                     <------ZmHOX2a(2)                                                                                    ------->TEIL                                                                                    <---------AGP1                      --------->ARR14(2)                                            --------->GLK1(2)                      --------->ARR11(3)                                            <---------ARR14(2)                      <---------GLK1(2)                                             --------->ARR14(2)                      <---------ARR14(2)                                         --------->ANAC55(2)                  <---------At4g35610                                            <---------ANAC55(2)                  --------->At4g35610                                            --------->ANAC46                 ----------->RAV1(1)                                             --------->ANAC55(1)               --------->At4g35610                                             --------->MYB52(1)               --------->ZAT2                              <---------------AGL15 --------->ANAC58              --------->ANAC46           <---------ZAT2    --------------->AGL15<---------LBD16       <------ZmHOX2a(2)                 <---------At4g35610                  --------->TOE2(2)      --------->ARR11(3)                 --------->At4g35610      ----------->GT1--------->ANAC58      <---------ARR11(3)          ---------->DOF2       <-----------GT1  --------->CCA1(2)     <-----   ggtctcaagatcaaaccagcagcagatactgcaaaacaaagtcagcttgttgatgaaattacagaatatagtaagataaacatacggatctgtaacagga  10049200                                                                   --------->DOF5.7(2)                                                                  --------->TOE1(3)                                  --------->MYB46(3)              --------->TOE2(3)         <--------                               <---------WRKY38(1)               ----------->GT1           <---------YAB1                               <---------WRKY12    <---------AHL20(2)                    --------->YAB1      <---------ICU4          --------->WRKY18(1) <---------AHL20(1)                    <<<<<<<<<ARR2 =HOX2a_HOX2a               --------->ANAC58      --------->AHL20(1)                    <---------ATHB12 =HOX2a_HOX2a               --------->ANAC58      --------->AHL20(2)                  --------->WOX13(1) -ZmHOX2a(1)<-----------GT1 --------->ANAC46      <---------AHL20(2)               <-----------GT1   atttttgatcattttcacaaactcaaacacaagtcaaccgataaaaccaaaataaaattgctaagaaacgttaaacacagataattaacaatcaaaattg  10049300                                                          --------->ANAC58                                                   <---------------AGL15                                                   --------------->AGL15                                                  ----------->RAV1(2)                                                 ------>MYB83                                                 ------>MYB46(1)                                                 --------->MYB52(1)                                       >>>>>>>>>TBF1      --------->ANAC58                                    >>>>>>>>>TBF1-------->P                                 >>>>>>>>>TBF1  --------->MYB55(1)                             <------ZmHOX2a(1) <---------MYB111(1)                           <---------TOE1(3)   <---------MYB59                           <---------TOE2(3)   <---------MYB46(2)                   ------>ZmHOX2a(1)     <----------ID1    --------->At4g35610   --------->ARR11(3)                  ------>ZmHOX2a(1) <- -ICU4                 <---------At4g35610   <---------ARR11(3)           <-----------GT1       <----   cagaaaaacaacaagaattagattgagctaaggaagaagaagaagaagacctacctgaagaagcaagagttttttttttcttcctcctctctggtttttt  10049400                                                                                  <------NtERF2                                                                                 <---------MYB46(3)                                             <---------ANAC55(2)                <---------ANAC58                  --------->ANAC58           <---------ANAC55(1)                <---------ANAC46                  --------->ANAC58           <---------ANAC58                <---------MYB46(3)     ---------->DOF2                         --------->ANAC55(2)             --------->MYB55(2)     *TSS------------>CBF                    <---------ANAC58                <---------DEAR3(1)   --------->HSFB2a(2)                       <---------ANAC46            <---------AtMYB61   <---------HSFB2a(2)       --------->GLK1(2)       <---------AHL20(2)  <-----------RAV1(1) ---------DOF2    --------->ANAC46         <-----------GT1            <----------DOF2        -------- -------GT1      --------->LBD16        <---------ICU4        <------ZmHOX2a(2) <---------ANAC58-----   tctttctgaaagacaattccacgaatgagagaagcttattagttattacgttttttttattccgatcaaaaacttttggtgggcgggttcttaacctgta  10049500                                                           <---------ANAC58                                                           <---------ANAC58                                                        <-------MYC2                                                        <-------MYC3                                                        ------->PIF4                                                        <-------PIF4                                                        ------->MYC3                                                        ------->MYC4                                                        ------->MYC2                                                        <-------MYC4                                                        <-------PIF5                                                        ------->PIF5                                                       <---------TGA1a                                                       --------->TGA1a        --------->ANAC58                               --------->O2  <---------AHL20(2)        <<<<<<<<<<AtMYC2  --------->ZAT2               <---------O2  --------->AHL20(2)      <-------        --------->ANAC55(2)    <---------ZAT2          ======================bZIP_DOF        <------MYB83        <---------ANAC55(2)    <---------At4g35610     ======================bZIP_DOF        <------MYB46(1)        --------->ANAC55(1)    --------->At4g35610     <---------ANAC55(2)                   <-------   ----------->HVH21      <---------ZAT2               --------->ANAC55(2)                   -------- --------->At4g35610      --------->At4g35610        <------------OsbHLH66 <----------DOF2  --------- --->GT1--------->ANAC58  <---------At4g35610     ----------->HVH21 --------->AHL20(2)      --------- ---->YAB1           <-----------GT1          <-----------GT1     <----------DOF2           ---------   ataagatgacacgtatagagttttatccagctcagctactcacccttgtaacttgacacgtgcttctccttttaattcttttaaaatttgaagttaggta  10049600                                                              <---------AHL20(2)                                                          <--------HAHB4                                                          --------->ATHB12              --------->LBD16                                                          <---------ICU4                ------>NtERF2                                                          --------->YAB1                <---------LBD16                                                         <---------ATHB12      <----------DOF2 --ANAC55(2)                        ------>MYB83  --------->AHL20(2)        --------->GLK1(2) --ANAC46                           ------>MYB46(1)    --------->WOX13(1)  <---------GLK1(2) --->GT1                           --------->MYB52(1)<---------ATHB12      --------->ARR14(2) >MYB111(1)                      --------->DEAR3(2)--------->YAB1          <---------ARR14(2) >MYB59                          --------->MYB46(3)--------->WOX13(1)    <---------TOE1(2)  <-------GAMYB >MYB46(2)           --------->ANAC46     ------>ZmHOX2a(1)   --------->AHL20(2)      <---------LBD16   taatgggcttaggcccatattacacgtaggctcggaccaacgtccttatccattaatcaatcatttaaaaactcccagattctttctctccgcgcgttgt  10049700                                                          <---------YAB1                                                        -------->ATHB1                                                        <--------HAHB4                                                        --------->AHL20(2)                                                        --------->ATHB51                   <---------DAG2                       <---------ICU4                   <----------DOF2                      --------->YAB1              <----------DOF2                           <---------AHL20(2)         ----------->HVH21                             <---------ATHB51       <---------ANAC55(2)  ------->TEIL               <---------ATHB12       --------->ANAC55(2)  --------->GLK1(2)          --------->ICU4              --------->GLK1(2)       <---------ANAC58     <---------ARR11(1) <---------ARR11(3)           <---------AHL20(2)       <---------ANAC58    <---------CCA1(2)   --------->ARR11(3)          --------->AHL20(2)     <---------ANAC58   --------->HSFB2a(2)   --------->CCA1(1)            <---------AHL20(2)     <---------ANAC58   <---------HSFB2a(2)   --------->RVE1(1)      <----------DOF2          -------     <---------ANAC46   --------->HSFC1(1)  --------->AHL20(2)  <-----------GT1   <---------GLK1(2)   tttagtagcgcgtgacctttacttttctcgaatctaaaatttcaaaaaaaatctccaattattttttaagccttttttttaatagaatctcagacaacaa  10049800                                                                                           --------->YAB1                                                                                           --------->AHL20(2)                                                                                 <---------AHL20(2)                                                                              <---------AHL20(1)                                                                     --------->At4g35610  ===========                                                                     ----------->GT1      <----------                               <---------ICU4                    <---------ARR11(3)       -----------                               --------->YAB1                    --------->ARR11(3)   --------->AHL20(2)                              --------->ICU4                     --------->GLK1(2)---------->DOF2                         <---------At4g35610                     --------->ARR14(2) ----------->GT1                        <---------TOE2(3)                        <---------ARR14(2)--------->DAG2  --                        <---------TOE1(3)                  <---------WOX13(1) --------->AHL20(1) ----              ----------->GT1 <---------YAB1            --------->ICU4       --------->AHL20(2) ----- -->MYB46(3)  <---------ANAC55(2)<---------YAB1         <---------YAB1     --------->AHL20(2)  ------   ctgttttaaacaaaatatgtaaaattaagcttattattatccaaaacctattcatgtcttaattgaaaatctgctaaaaatatataaagttaataaaaaa  10049900  Previous    Next  AGI:  At4g18140.1    Description:  similar to NLI interacting factor (NIF) family protein [Arabidopsis thaliana] (TAIR:AT5G46410.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66897.1) Range:  from: 10046587    to: 10049405    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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