Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                   ------>ZmHOX2a(2)                                                                                <------ZmHOX2a(2)                                                                               <-----------ARR10                                                                               <---------ARR14(2)                                                                               --------->ARR14(2)                                                                               --------->GLK1(2)                                                                               --------->ARR11(3)                                                                    ----------->GT1                                                                   ----------->GT1                                                                  ------>ZmHOX2a(2)                                                                  ===================HOX2a_HOX2a                                                                 <------ZmHOX2a(2)                                                                 ====================HOX2a_HOX2a                                                                <---------ARR11(3)                                                                --------->ARR14(2)                                                                --------->ARR11(3)                                                                --------->ARR14(3)                                                                <---------ARR14(3)                                                                <---------AGP1 <---------ARR11(3)                                    --------->ANAC46            <---------ARR14(2)      ----------->RAV1(1)           <----------ID1--------->At4g35610          <---------AGP1 ->LBD16--------->MYB46(3)        <-----------GT1 <---------At4g35610     ---------->DOF2           - ->RAV1(2)             <---------GLK1(2)     <----------DOF2    --------->AGP1<------ZmHOX2a(1)    <-   accattcccaacaaatcacaaacttgattctcagtataacgacacaactttgagcttaaacatcaagatctgttaaaaaaggatctagctaattcaaact  10015400                                                                                     --------->TOE2(3)                                                                                 <---------MYB52(1)            <----------DOF2                                                     --------->At5g28300        ------>MYB46(1)                                                  ---------->DOF2        ------>MYB83                                                   <-------TEIL  <----------DOF2 -------->YAB1                                           ------>ZmHOX2a(1)     ----------->GT1 --------ATHB12                      <---------TOE2(3) --------->YAB1 --------->CCA1(2)   aatcaaaacctagcctttaacaattgaaatctagagtttatggattcaaaagactaatcctaacatagaaagattcaaagaccgtaactttagcactgaa  10015500                  ------>ZmHOX2a(2)                 --------->GLK1(1)                                                            <------                 <------ZmHOX2a(2)                                                   ------>ZmHOX2a(2)                 <---------GLK1(1)                                                  <------ZmHOX2a(2)                --------->ARR11(3)                                                 <---------ARR14(3)                <---------ARR14(2)                                                 --------->ARR14(3)                <---------AGP1                                                     <---------AGP1                <-----------ARR10                      ----------->GT1             --------->ARR14(2)                --------->ARR14(2)               --------->ZAT6                    --------->ARR11(3)               <---------CCA1(2)               --------->MYB52(1)             <---------REM1(1)               <---------ARR14(1)        --------->ANAC46    <---------AHL20(1)    <---------ARR14(2)           --------->ARR14(2)            --------->ANAC58    --------->ARR11(3)    <---------ARR11(3)           --------->GLK1(2)             --------->ANAC58    --------->AHL20(1)   <---------CCA1(2)          <---------GLK1(2)          <<<<<<<ZML2>>>>>>>>>>AtWER      ----------->RAV1(2)  <---------REM1(1)       --------->ANAC46        --------->AGP1<---------MYB52(2)     ------->TEIL ----------->ARR10   atcgaaaacacagaatcggatctcgttgaaacagagctagaacacgaactaacagtagagaaaaatattgaacctggtcgatgtagatcttgttgaagca  10015600                          ------>ZmHOX2a(2)                         --------->GLK1(1)                         <---------GLK1(1)                         <------ZmHOX2a(2)                        <---------ARR14(2)                        --------->ARR14(2)               <---------ANAC58                        --------->ARR11(3)               <---------ANAC58                        <---------ARR11(3)              --------->At4g35610                        <---------AGP1                  --------->ZAT2        ---------->DOF2                        --------->AGP1  <---------ARR11(3)               ----------->GT1     --------                       <---------CCA1(2)--------->ARR11(3)             ---------->DOF2     --------->ALFIN1 ---At4g35610          --------->At4g35610 <----------DOF2     <---------At4g35610 <----------DOF2   gagagactctaaaatttctcttatcagatctctctggtttaagctcttttcagtgatgagcttgcagtagccagaaagtataaagctttgtgagtgtgac  10015700                             <<<<<<<<<TBF1                      --------->ARR11(3)           <---------YAB1                 <------NtERF2                   <---------ICU4        <---------ZAT14        <-----------GT1  ------>NtERF2                --------->YAB1        ---------->ID1  --------->CCA1(2)         <---------ANAC46<---- --->HVH21    --------->AHL20(2)  <----------DOF2  <---------TOE2(3)      <---------REM1(1)<---------AHL20(2)   agagagagaactcacttaaaataatgtcttcttcttctttgtcttcactaattaagatttgatttttaacttgaagatgaaggcgcgtttgattttattc  10015800                                                                 <---------YAB1                                                                --------->AHL20(2)                                                                --------->YAB1                                                           ------------>CBF                                                       --------->YAB1                                                    ------>ZmHOX2a(2)                                                   <------ZmHOX2a(2)                                                  --------->ARR14(3)                        =========                                                  <---------ARR14(2)         ------------>CBF                                                  --------->ARR14(2)   <---------YAB1       ------>ZmHOX2a(2)                                                  --------->ARR11(3)  ------------>CBF     <------ZmHOX2a(2)                                  <---------ZAT14 <---------ARR11(3) <-----------GT1       ==========                           *TSS<---------ANAC46   --------->AGP1<---------AHL20(1)        --------->ARR11(3)   --------->HSFB2a(2)    <---------AHL20(2)      <-----------ARR10  --------->YAB1       <---------ARR11(3)   <---------HSFB2a(2)   --------->AHL20(2)       <---------ARR14(3)<---------YAB1        --------->AGP1 -----AHL20(2)           <---------AHL20(2)     ----------->ARR10<---------AHL20(2)       <---------AGP1   aatttctataaacaaaacatgttggaattaaatgtgtgtagtttcgcagcaagatcttcataacaatattattacaatactcaatagatttagatctaat  10015900                ------>ZmHOX2a(1)               --------->TOE2(3)            ------->TEIL          <-------TEIL         --------->ANAC58         --------->ANAC58        <-------PIF4        <-------MYC3        <-------PIF5        <-------MYC2        ------->PIF5        ------->PIF4        ------->MYC2                                     --------->AHL20(2)        ------->MYC3                                 --------->AHL20(2)        <-------MYC4        <---------YAB1       <---------ANAC58    <---------ZAT14        <---------AHL20(2)<---------ANAC58    <---------ZAT18      <---------YAB1      <---------ANAC58    --------->ZAT18    <---------AHL20(2)    <---------ANAC46                 <---------AHL20(2)    --------->ZAT14<---------YAB1          <---------ANAC46             <---------DAG2 <---------ARR14(2) ======================HOX2a_HOX2a      <----------DOF2  <---------AHL20(2) <---------YAB1      <---- ======================HOX2a_HOX2a<-----------GT1<---------ANAC58       <----------DOF2--------->ARR14(2)   ctggactgcacatgcatccttatgtttatttttattcaacctcttttgtgtgcgtttatatatataaacctatactttattattttgcatatttgaagct  10016000         <---------ANAC46                          --------->ATHB51        --------->ATHB12                           --------->ATHB12     <-------GAMYB                                --------->ICU4                      <------ZmHOX2a(2)    <---------MYB46(3)                            <---------YAB1                     <---------ARR11(3)    --------->MYB111(1)                         --------------->AGL15                --------->ARR11(3)    --------->MYB111(2)                         --------->YAB1                   ---------->DOF2    --------->MYB52(2)                          <---------------AGL15    <---------AHL20(1)    --------->MYB55(2)                  <---------YAB1                   --------->AHL20(1)    --------->MYB46(2)              <---------GLK1(2)                 --------->AHL20(2)   <--------P        <---------AHL20(2) <---------TOE1(3)      <----------DOF2--------->AHL20(2)----- ------DOF2          --------->AHL20(2) <---------TOE2(3)     <---------DAG2  <---------AHL20(2)<----   tttgggtagttgattgtagctatttaaaatcaatttcagattatggtttagcataattggaaaaccttttgtttatatattaaaaaagatcaaatccata  10016100                                                                                 <---------SPL7                                --------->AHL20(2)                              <---------ANAC58                        ----------->GT1                          --------->At4g35610                -------->HAHB4  <---------AHL20(2)         --------->ICU4       <---------ANAC58                --------->YAB1  <---------AHL20(1)         <---------YAB1      ---------->ID1    <---------TOE2(3)  ----------->GT1                   <--------HAHB4  --------->GLK1(2)   --------->YAB1    ---------->DOF2 <---------MYB46(3)  --------->YAB1  --------->ARR11(3)    ------ -->MYC3       <---------YAB1   --------->AHL20(1)      <---------YAB1   <-----------ARR10     <----- ---MYC3     --------->YAB1    --------->AHL20(2)   <---------ANAC46    <---------GLK1(2)--------->ALFIN1   tgctataagattgcataataatagaaaggaaaattttatttgttgaaacgagtgatgtattattattagccgaagaatcttgtcgtcccaagtggtcctt  10016200                                              <---------ALFIN1                                           <---------ETT(1)                                           --------->At1g77200                                           ------->GAMYB                                          --------->DEAR3(2)                                         -------->P                                         ------>MYB83                                    ==============================HOX2a_HOX2a                                    ------>ZmHOX2a(2)                                   <---------GLK1(1)                                   --------->GLK1(1)                                   ===============================HOX2a_HOX2a                                   <------ZmHOX2a(2)                                  <---------ARR11(3)                                  --------->ARR14(2)                   <---------At5g28300                                  <---------AGP1                      <---------WRKY12                                  --------->ARR11(3)                  <---------WRKY38(1)                                  <---------ARR14(2)   --------->ARR14(2) <-----------HVH21     >>>>>>>>>TAC1      --------->ANAC58 --------->MYB52(1)          ----------->HVH21             --     <-------GAMYB      --------->ANAC46 ------>MYB46(1)            <-----------HVH21           <---- >ZmHOX2a(1)            --------->ANAC58------>ZmHOX2a(1)  ------>ZmHOX2a(1)         ----------->GT1 -----DOF2      <-----------GT1  <---------CCA1(2)     <---------ARR14(2)--------->DEAR3(1)     -----   ttcagacagttggacaatttacatactcgctacttagatctcctaccgacactcccatttcctctaaaccggtcaccgtcaaaaaccgagttaatcggtt  10016300  Previous    Next  AGI:  At4g18030.1    Description:  dehydration-responsive family protein. similar to dehydration-responsive family protein [Arabidopsis thaliana] (TAIR:AT1G26850.2); similar to dehydration-responsive family protein [Arabidopsis thaliana] (TAIR:AT1G26850.1); similar to dehydration-responsive family protein [Arabidopsis thaliana] (TAIR:AT4G10440.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63459.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48396.1); similar to unknown [Malus x domestica] (GB:AAF27920.1); contains InterPro domain Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159) Range:  from: 10012373    to: 10015827    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version