Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               <---------ZAT6             <-----------RAV1(1)           <---------ANAC46         <---------ZAT14    <---------YAB1 --------->AHL20(2) <---------YAB1 <---------AHL20(2) -------AHL20(2) ------>AHL20(2) ------>AHL20(1) -------AHL20(1)                     --------->ATHB12 -------ARR11(3)     <-----------GT1--------->ICU4 ------>ARR11(3)----------->GT1   ----------->GT1                     <----------DOF2             --- ->GT1   --------->ZAT14     <---------AtLEC2                  <---------ICU4                    <---   tatattattagtttagtgttgtttaactcgtgcatgcagtgattagttaacttaacaacacagactaatgacctttaacaaatactaaaacataggctta  10007100                      --------->GLK1(1)                  ----------->GT1       <---------ATHB12--------->ARR14(2)      <---------TOE2(3)<---------ARR14(2)   <---------MYB52(2) <---------GLK1(1)                --------->CCA1(2)                  --------->YAB1 ------>YAB1   ---------->DOF2                        <---------ARR11(3)         <---------YAB1 ------YAB1 <------ZmHOX2a(1)                         --------->ARR11(3)---------->DOF2  <---------ATHB12   tgacaactaatgaaggagaaaggcaaatccctagaatttagggaaattgagagagagatatatacccagagagaaaaagaattgtgatcaaatcataagt  10007200                                                      ------>ZmHOX2a(2)                                                     <------ZmHOX2a(2)                   --------->ANAC58                                              <------ZmHOX2a(1)--------->LBD16           --------->ANAC46                                              ==============HOX2a_HOX2a                  --------->ANAC58                                              ===============HOX2a_HOX2a                <-------MYC3                               --------------->AGL15--------->ARR11(3)            <---------bZIP60(1)                               <---------HSFB2a(2)  --------->ARR14(3)            ===================                               --------->HSFB2a(2)  <---------ARR14(3)            --------->bZIP60(1)                               <---------------AGL15<---------ARR11(3)            --------->TGA1a                              ----------------->AGL2--------->ARR14(2)   <------ZmHOX2a(2)                              ----------------->AG----------->ARR10     --------->ARR11(3)       ----                              ----------------->AGL1<---------AGP1--------->CCA1(2)     ------->MYC3-                              ----------------->AGL3<---------ARR14(2)  <---------ARR11(3)     ------                           <----------DOF2    ==================================HOX2a_HOX2a   <------                <---------TOE2(3)   --------->At4g35610    <-----------GT1        --------->ANAC46  <  <----------DOF2       <-----------GT1--------->At4g35610<---------CCA1(2)       ===================   tgcactttcgataaaactgatgtttttttctttccataagcagaagaaggagaagatcttatatccagataagagatcatgctcacatcacatgcaatga  10007300     <---------WOX13(1)  <---------AHL20(2) ======================bZIP_DOF --->TEIL -------->ANAC55(2) --->YAB1        ---------->DOF2        ------>MYB83 ---ATHB12  ---------->DOF2    --------->AHL20(2) ---------ANAC55(2)   <----------DOF2   ------>MYB46(1)                          <-------TEIL ================================bZIP_DOF             --------->YAB1      ----------->GT1         <--   acatgtaattgatcaaaagaaaagctttggaaatttaaaaccaaacaaacaaactttcacaattcagaagtcaaatgagtaaattcatattttagagttc  10007400                               --------->At4g35610                             ===================HOX2a_HOX2a                             =======================HOX2a_HOX2a                             ------>ZmHOX2a(2)                            <------ZmHOX2a(2)                            --------->CCA1(2)                            ====================HOX2a_HOX2a                            ========================HOX2a_HOX2a                           <---------ARR11(3)                           --------->ARR14(2)                           <-----------ARR10                           --------->ARR14(3)                           <---------ARR14(3)          <----------DOF2                           --------->ARR11(3)          *TSS                           <---------ARR14(2)          --------------------->WRI1      --------->TOE1(2)    --------->AGP1         <---------ARR11(3)      --------->TOE2(2)    <---------AGP1       --------->ANAC58     ----------->RAV1(2)  <---------CCA1(2)     --------->ANAC58                                -----    -------->P      <---------ANAC58         ------>ZmHOX2a(1)                                ------- <---------DAG2     <---------ANAC46        --------->TOE2(3)                     ------>ZmHOX2a(1) ---------GT1       <---------ANAC58     ------>ZmHOX2a(1)    <-----------HVH21 ----------->RAV1(2)   tcaccttacctgagagagtgtttcttgcagatctgcttaaatccttcctcaagctctctttatctgtctcgccctctctctatcctgagtcacattcaaa  10007500                            ----------->HVH21                          <---------ANAC58                          <---------ANAC58                          ----------->GT1                        <---------ANAC46                      <---------LBD16                <---------AHL20(2)                                     <------MYB46(1)      ---------                --------->AHL20(2)                                     ----------->GT1     <---------YAB1               <---------AHL20(2)                                      <------MYB83       <----------               --------->AHL20(2)                              --------->YAB1          <---------ANAC58       --------->AHL20(2)<---------DEAR3(1)                   <---------YAB1           <---------ANAC58 ------>GT1 --------->AHL20(2)          ----------->GT1     --------->YAB1      <-----------RAV1(1) --->DOF2  --------->AHL20(2)   <----------DOF2          ----------->GT1        <---------ZAT6   gttaaaaaaaaaaataaaaaaatttggggggtgactttgagagagagaaaatggatgaagagttataataagttggtgactagtgttgttcttgtcattg  10007600                                                                                        <---------YAB1                                                                                       <---------AHL20(2)                                                                                     <---------YAB1                                                                                   -------->HAHB4                                                                                   <--------HAHB4                                                                                   --------->ATHB51                                                                                   <---------ICU4                                                                                   --------->YAB1                                                                                   -------->ATHB1                                                                                   <---------AHL20(2)                                                                                  <---------YAB1                                                                                  --------->ICU4                                                                               --------->AHL20(2)                                                    <---------TOE2(3)       <------ZmHOX2a(1)                                               --------->MYB52(1)         <---------TOE2(3)                                             --------->DOF5.7(2)          <---------TOE1(3)                                          <---------TOE2(3)             --------->CCA1(2)       <----                                          <---------TOE1(3)           --------->CCA1(2)<---------AHL20(1)                                        ---------->DOF2          ---------->DOF2  <---------ATHB51  < >ATHB12                ---------->DOF2--------->CCA1(2)     <------ZmHOX2a(1) <---------AHL20(2)---- -HVH21      ---------->DOF2        <---------TOE2(3)       ----------->GT1--------->ICU4     -------   ggttatgcacagagataaagagaataaaaagtcttactaagataaaggttaactgaggttagaggaaaaaagagataaggattaattattatttttgtct  10007700          --------->CCA1(2)         <---------ARR11(3)         --------->ARR11(3)         --------->AHL20(1)                          --------->TOE1(3)     <---------ICU4                                  --------->TOE2(3) --------->TOE2(3)     --------->YAB1                          --------->GLK1(2)       <---------ARR11(3)    <---------ATHB12                         --------->ARR11(3)      --------->GLK1(2)  --------->WOX13(1)                  --------->ANAC58               --------->ARR11(3) ------DOF2               ------>ZmHOX2a(1)  <---------ARR11(3)     --------->RVE1(1) ---------YAB1    --------->AHL20(2)  --------->ANAC46    --------------->AGL15             --------- ----->ICU4    <------ZmHOX2a(1)      --------->ANAC58    <---------------AGL15--------->TOE2(3) ---- --->ID1 <---------AHL20(1)  --------->YAB1 --------->RVE1(1)     --------->AHL20(2)       <---------YAB1   ttattaatcaatatataggattaatttcctataacaatacaagaaaaaatctaaaccttaccaaaaaaaaaaatctaaatcccttaatatgtcattatat  10007800                                                                                                 ----                                                                                              -------                                                                                              xxxxxxx                                                                                             xxxxxxxx                                <---------ICU4                                               xxxxxxxx                                --------->ATHB51                                             <-------                                <--------ATHB1                                              ------>MYB46(1)                                <---------AHL20(1)                                          xxxxxxxxx                                --------->AHL20(2)                                          xxxxxxxxx                                --------->YAB1                         <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                               --------->ICU4                          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                        <---------ETT(2)                --------->AHL20(1)                  ------>MYB83                  <---------AHL20(2)                    <---------AHL20(1)                 --------->WOX13(1)                 --------->AHL20(2)        --------->AHL20(2)    --------->LBD16          <xxxxxxxxxx                 <---------AHL20(2)  <-----------GT1    --------->AHL20(2)             <-----------GT1 >AHL20(2)   --------->AHL20(2)<---------ATHB12         <---------AHL20(2)         <xxxxxxxxxxxxxxxxx ----->YAB1  <---------AHL20(2)<---------ATHB51 <-----------GT1<---------LBD16 <xxxxxxxxxxxxxxxxxxxxx   caaaattagcctagttttattaaatgtagaccaataattttacaaaaatataacaaaatttattgtccggtatagaactatacccatttgtaccaatcaa  10007900                        <---------YAB1 ----->MYB52(1)   <---------MYB52(2) -->YAB1        ------>MYB83                                        --------->AHL20(1) xxxxxxxxxxxxxxxx>smallRNA(si3)                                     <---------AHL20(2) xxxxxxxxxxxxxxx>smallRNA(le3)                                      <---------AHL20(1) xxxxxxxxxxxxxxx>smallRNA(si3)                                      <---------ARR11(3) --ATHB12       ------>MYB46(1)                                     --------->AHL20(2) xxxxxxxxxxxxx>smallRNA(si3)                        <---------AHL20(2) xxxxxxxxxxx>smallRNA(le3)                          <---------YAB1  --------->ARR11(3) xxxxxxxxxxxxxsmallRNA(i2)                      <----------DOF2   ------->TEIL         --------->At5g28300 xxxxxxsmallRNA(fl3)  --------->YAB1       ---------->DOF2     <---------ATHB12       ----------->GT1 xsmallRNA(i2)<---------MYB59         <----------DOF2    <-----------GT1          --------->ATHB12---   aacggtgcgaagtaaaccgaactaacatgataagaaaactcttttaaaagcttttttattaactaatgaatatattctactaaatgaatggtaaatgaaa  10008000  Previous    Next  AGI:  At4g18020.1    Description:  APRR2 (PSEUDO-RESPONSE REGULATOR 2); transcription factor. Identical to Two-component response regulator-like APRR2 (APRR2) [Arabidopsis Thaliana] (GB:Q6LA43;GB:O49701;GB:Q94F45); similar to GPRI1 (GOLDEN2-LIKE 1), transcription factor [Arabidopsis thaliana] (TAIR:AT2G20570.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63460.1); contains InterPro domain Response regulator receiver; (InterPro:IPR001789); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain CheY-like (InterPro:IPR011006); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-bi Range:  from: 10003303    to: 10007455    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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