Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                            --------->AHL20(2)                            ----------->GT1                                         ------->GAMYB                  ---------->DOF2                                                ----------->RAV1(1) ---->ANAC46   --------->ANAC58                                --------->YAB1----------->HVH21 -->ANAC58     --------->ANAC58                         --------->YAB1     <---------AtLEC2 -->ANAC58     --------->AtLEC2                     ------>ZmHOX2a(2)      <---------ANAC58 -->ANAC46  <-------TEIL  --------->ICU4  <----------DOF2    <---------YAB1<---------ANAC58<---------AHL20(2)   aaaacaaaacaaaatgcatgcaaagacaattagtaaaacaacttctttttttgatctaacatcatgaataacatttggcatgacaacagaaattttatag  9965400                                                                                                  <--                                                                                                  ---                                                                                                -----                                                                                                <----                                                                                               ======                                                                                             <-------                                                                                            ---------                                                                                          <---------MYB52(2)                                                                                       ==============               --------->YAB1                                       <----------ID1     ==============            ----------->GT1                                         ----------->GT1    <------ZmHOX2a(1)       --------->YAB1                                           ---------->DOF2  --------->YAB1<-----       -------->HAHB4                      <---------GLK1(2) --------------->AGL15   --------->ANAC58      <---------YAB1           <---------YAB1                <---------------AGL15   --------->ANAC58    --------->YAB1   --------->YAB1  <---------YAB1          --------->TOE2(3)  <---------TOE2(3)<---   tttcgataataatacagtaatactcatagttttatgattctgactgaatcgccaattgtttttcattaaagagaaaaatactatggtaaggaactaagga  9965500                                       <---------ALFIN1                            ------->MYC4                            <-------MYC4                            ------->PIF5                            ------->MYC2                            <-------PIF5    ------->MYC4                            ------->MYC3    <-------MYC4                            <-------MYC2    ------->MYC2                            <-------MYC3    <-------MYC3                            ------->PIF4    ------->MYC3                                           <-                            <-------PIF4    <-------MYC2                                          <--  <-------MYC3             <---------ANAC58<---------O2                                          <---  ------->MYC3             <---------TGA1a --------->O2                                       <------ -----TEIL                 --------->ANAC55(2)                                               -------- --->ZmHOX2a(2)            <---------ANAC58--------->TGA1a                                   -------- ---->ARR14(2)             <---------ANAC55(2)         --------->At4g35610                  --------- -----ARR14(2)             --------->TGA1a <---------TGA1a                                  <-------- ==============================HOX2a_HOX2a <---------ANAC55(2)                         <---------At4g35610 --TOE2(3)                 <---------ANAC46--------->ANAC55(2)                         --------->At4g35610 >MYB52(1)                ------------>OsbHLH66        <---------ZAT2                <---------WRKY38(1) ===HOX2a_HOX2a         <------ZmHOX2a(2)<---------ALFIN1                          <-----------HVH21 ====HOX2a_HOX2a        ====================HOX2a_HOX2a--------->ZAT2          <---------WRKY18(1)<-- -ZmHOX2a(1)           <-----------HVH21<---------REM1(2)                     --------->WRKY12------- ---ZmHOX2a(2)      <------NtERF2    ------>ZmHOX2a(1) <---------At4g35610    ----------->HVH21 -----   tccatgtggtaatcgaagagtcgtcgatcacgtgcaatcctccacacgtgttaagtcagctcgtagttgattcttcccccttgacggtcatctcatcgga  9965600      <------ZmHOX2a(2)     --------->ARR11(3)                                                    <---------ETT(2)   ----------->ARR10                                                       --------->ETT(2) ------GAMYB                                                            ------->GAMYB -------MYB46(3)                                                  <------ZmHOX2a(2) ------DEAR3(1)                            <---------REM1(1)      --------->CCA1(2) ---SPL7 --------->At4g35610        --------->DAG2               --------->ARR11(3) ->TOE2(1)                         --------->DAG2                <---------ARR14(2) ->TOE1(1)                        ---------->DOF2            ---------->DOF2 >At4g35610                   --------->ANAC58          ----------->GT1--------->MYB46(3) -At4g35610                   --------->ANAC58  <---------ANAC46 <---------ARR11(3) -------DEAR3(2)              --------->ANAC46  <---------ANAC58 --------->ARR14(2)                <- ---->HVH21                  <---------LBD16    <---------ANAC58 --------->AGP1               <------ ---->SPL7     <----------DOF2--------->ANAC55(1)     ---------->DOF2--------->MYB52(1)---------->DOF2   cggttgagatcagccaactttaagtgtatcacacggaaaagggaaatgtagcgcgagaaagtcaaaagatccaacggtcgatatgaaacaaaagtcagat  9965700                   <---------------AGL15                   --------------->AGL15              *TSS                  ----------------->AGL2            --------->YAB1     ----------->GT1                      <---------YAB1    --------->ANAC58             <------------CBF   <---------ICU4    --------->ANAC58           --------->MYB46(3)  <---------YAB1   <---------TOE1(2)          ------------>CBF   --------->YAB1              --------->ANAC58   --------->SPL7 <-----------------AGL3 --------->KAN4(2)                   ----------->GT1 <---------SPL7   ----------------->AGL3<---------KAN4(1)                    --------->ANAC58 --------------AtSPL3----------->TBP    --------->KAN4(1)                  ---------->DOF2         <- ---At4g35610   ------->TEIL ----------->RAV1(1)<---------YAB1     <------ZmHOX2a(2)  ---------->DOF2   aatcgtacggtagaaacgaagctatatatagcaacaattggattattcttatcatcatcactctctgagatcgaagagaaagcaaaatcaaagttgtgat  9965800                                                                                        --------->LBD16                                                                        <---------At4g35610                                                                    --------->LBD16    --------->HSFB2a(2)                                                          <---------MYB46(3)      <---------ARR14(2)                                                         --------->ALFIN1         --------->ARR14(2)<                                <---------ARR14(2)      <---------MYB52(1) <---------TGA2(2)   ------                                --------->ARR14(2)     <---------At4g35610----------->HVH21    ------                               <---------MYB52(1)    <-----------RAV1(2)--------->At4g35610    ------                           ------>NtERF2      <---------MYB52(1)  <---------LBD16<---------CCA1(2)  -             ----------->ARR10<---------DEAR3(2)  <XXXXXXXXXXXXXXXXXXXXMIR841 ------>NtERF2  -------- --------GLK1(1)       --------->MYB52(2)   ----------->GT1  <-------TEIL ----------->TGA1<------ZmHOX2a(1)   gaaatctctattgatgagaaccggttcgatgccggttcttcaaaaccggttaatttcaggtggttcatcgcggaagatgacgcctatctccaggaccaac  9965900                                             <---------ARR11(3)                                             --------->ARR11(3)                                            --------->HSFB2a(1)                                        <------NtERF2                                       ------>NtERF2                                       --------->LBD16                                     <---------LBD16                                     --------->ATERF1(1)                                     <------NtERF2                                    <---------ERF1                                    <---------RAP2.3(1)                                    ------>NtERF2                                    <---------DEAR4(2)                                    <---------ATERF1(1)                                   --------->ATERF1(2)                                   --------->DEAR3(1)                                   <---------ATERF1(2)                                  --------->ATERF1(1)                <---------At4g35610<---------RAP2.3(2)         <---------YAB1           <---------LBD16       --------->YAB1          <-------TEIL----------->ARR10       -------->ATHB1        <---------GLK1(2)       <---------ICU4        <---------ARR14(2)      <---------ATHB12       --------->ARR14(2)                                   <---------MYB46(3) -----------HVH21            --------->ARR11(1)                                  <---------ANAC46 -->P --------->ICU4<---------DEAR3(1)<---------ANAC46              <---------REM1(1) >MYB46(1)      <---------ZAT2--------->CCA1(2)              <---------TOE1(3) --------->LBD16 >MYB83<--------HAHB4      ----------->ARR10<---------HSFB2a(1)    <---------TOE2(3)  <-------GAMYB -------->LBD16 --------->At4g35610<---------DEAR3(1)        <---------TOE2(3)<---------ANAC46 ------ ->AtMYB61      --------->ZAT2--------->ARR14(1)       <---------TOE2(3)     <---------LBD16  -------   tccgtcgaatcattatccagctacggcgagagattcgccggcgggaagatttcgatcgaggttaaggctaatgtagggatgcggagggtgttatcggaaa  9966000                                                                --------->LBD16                                                               --------->LBD16                                                              <---------LBD16            ------>ZmHOX2a(2)                              --------->GLK1(2)           <------ZmHOX2a(2)                               <---------ARR14(2)           --------->CCA1(2)                         <------NtERF2          <---------AGP1                            <---------ATERF1(1)          --------->ARR11(3)                        --------->LBD16          <---------ARR11(3)                        ------>NtERF2          --------->ARR14(2)                       --------->DEAR3(1)        ----------->ARR10                          <---------ATERF1(2)   <---------YAB1                                  --------->ATERF1(2)           --------->ALFIN1 ----------->GT1                                  <---------LBD16   <------ZmHOX2a(1) <---------ANAC46                      ------>ZmHOX2a(2)   --------->ARR14(2) <---------ANAC46  <---- --------->bZIP60(1)                   ====================================HOX2a_HOX2a<------ZmHOX2a(1) <---------bZIP60(1)                 <---------AGP1<---------DEAR3(1)     ---------->DOF2       <---- --->DAG2 <---------ARR14(2)         <-----------ARR10    <---------GLK1(2)   --------->ALFIN1 <----- --->DOF2 --------->AGP1   ---------->DOF2        --------->ATERF1(1)    <---------REM1(1)     ------   gtgatgtgattagatctgagagaatgttgaaaagagttggatctaagccttcgccggcgagaatcccggaggatgatgaagcgggggaggaagaaattag  9966100                                                                            <---------MYB46(3)                                                                           <---------AtMYB61                                                                           --------->ALFIN1                                                                         <---------MYB46(3)       <--                                                                         <------MYB83            <---                                                                        <---------AtMYB61       <----                                                                       <--------P               <----                        ------>ZmHOX2a(2)                            --------->ALFIN1         -------                      --------->ARR11(3)                             <-----------RAV1(1)      <------            <---------ANAC58                                        <------NtERF2<---------ARR14(2)<-            <---------ANAC58   --------->MYB55(2)                 <---------ANAC46 ------>ZmHOX2a(2)           <------MYB83 =============================HOX2a_HOX2a  <---------DEAR3(1)         <-------          --------->ALFIN1     <---------MYB46(3)                 <---------DREB2C(2)        <-------         <--------P   <---------ARR11(3)                         <------NtERF2   --------->ARR14(2)--       --------->ATHB12--------->GLK1(1)                         --------->ATERF1(1)         <-------       <---------MYB46(3)     <---------AtMYB61                  <---------ABI4(1) ==================    <---------At4g35610<---------GLK1(1)      <------ZmHOX2a(1)--------->ALFIN1<---------MYB46(3)<--- --MYB46(1)<------MYB46(1)<---------LBD16--------->ALFIN1      ----------->HVH21 --------->ARR11(3)<- --MYB83<-------GAMYB--------->YAB1  ----------->RAV1(2)  <---------LBD16<------MYB46(1)     <------- ----TOE2(3)<---------ANAC46 <---------MYB52(1)        <-----------HVH21<---------MYB46(3)   <------- --->MYB59<---------MYB46(3)--------->LBD16 <---------ANAC46   <---------DEAR3(1)<---------AGP1<-----   gtttgcagatggttgggggtctatgatctccggtggtttacctgtggaggagaaatgtttcacgggtggcggtgttggtggtggatctggttatagcggc  9966200                       --------->ARR14(2)                       <---------MYB52(1)      --------->MYB52(1)  <---------YAB1  --------->HSFB2a(2)  <---------ARR14(2)  <---------HSFB2a(2) <-------GAMYB -----GAMYB          <---------MYB46(3) ------DEAR3(2)     <---------DEAR3(1)                                              <--------ATHB1 -----DEAR3(1)      <---------ANAC46                                                -------->HAHB4 -----ANAC46       --------->ATERF1(1)                                              <---------ICU4 ----->AtMYB77     <------NtERF2                     <---------YAB1                <---------ATHB51 ---RAP2.3(1)     ------------>MYB.PH3(1)          <---------ICU4                  <---------ATHB12 --------ARR14(2) ------------>AtMYB77            <---------YAB1                ------>ZmHOX2a(1) --RRTF1(2)     <------ZmHOX2a(1)            ----------->GT1                  --------->YAB1 --RAP2.6(2)    ==================================HOX2a_HOX2a            ==============HOX2a_HOX2a ------->ARR14(2)<---------DEAR3(1)         ------>ZmHOX2a(2)            ------>ZmHOX2a(2) --RAP2.3(2)    ===================================HOX2a_HOX2a          ===============HOX2a_HOX2a ===================HOX2a_HOX2a            <------ZmHOX2a(2)            --------->CCA1(2) ------MYB46(3) --------->ATERF1(1)       <---------ARR11(3)            <------ZmHOX2a(2) --------MYB52(1)--------->ALFIN1         <---------ARR14(2)           --------->ARR11(3) --DEAR3(1)   --------->ALFIN1            --------->ARR14(2)           <---------ARR11(3)         --- --RRTF1(3)  <------ZmHOX2a(1)  --------->CCA1(2) --------->ICU4       --------->AGP1          <----- -NtERF2     =====================================HOX2a_HOX2a  --------->ARR11(3)  --------->ICU4 <--   ggttatggaaacggaggaggaggcggttatgaagataagagcaagatcggtgattattatcgagagatgttgagatctaatcctaataattcgcttcttc  9966300  Previous    Next  AGI:  At4g17940.1    Description:  binding. similar to binding [Arabidopsis thaliana] (TAIR:AT5G20190.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63389.1); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Tetratricopeptide region (InterPro:IPR013026) Range:  from: 9965754    to: 9966981    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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