Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                 <-----                                                                         <----------DOF2       ------                                                                         ============================                <---------HSFC1(2)                                       <---------DAG2        <-----                --------->HSFC1(2)            --------->ANAC55(2)  --------->HSFB2a(2)         <-----    ----------->GT1                         <---------DOF5.7(2)    <---------HSFB2a(2)         ------   --------->DAG2      --------->ETT(1)    <-------TEIL         <---------AHL20(2)             <-----  ---------->DOF2 <----------DOF2      <---------TOE2(3)    <---------AHL20(2)                 <----- ----->GT1---------->DOF2            <---------ATHB12  <------------------------ANAC81         <-----   aaaaaaaagtaagaaagaagctttgtcggaaaacttccaatgaggttcacgtttctctgtttttattttatagaacttttttttgaaaactattgagacg  9939300 ----O2 --->TGA1a ====bZIP_DOF ----ANAC46         --------->GLK1(2) ----ANAC58         --------->ARR11(3) <-----------GT1          --------->AHL20(2) --->O2             <---------ARR11(3) <---------YAB1           <---------AHL20(2) ----ANAC58  --------->YAB1          --------->YAB1            --------->AHL20(2)                   < ----bZIP60(2)  --------->YAB1      <---------YAB1            <---------YAB1             --------->DAG2 ----TGA1a  <---------YAB1--------->YAB1                  <----------DOF2<----------DOF2---------->DOF2   tggctattgttgttatcatcaaaatctatattgatactattatactcgatatgttatagactttattaaaaaaaactttgtttgtttgcagaaagtggat  9939400                                                            <---------YAB1                    --------->ATHB12                       <---------AHL20(1)                    <---------ICU4                     --------->AHL20(2)                <---------YAB1                     --------->AHL20(2)                              <-               <---------------------WRI1          <---------AHL20(2)            --------->YAB1    --              --------->YAB1                    <---------CCA1(1)              --------->AHL20(2)  <-          --------->AHL20(2)                    <---------RVE1(1)            <----------DOF2       --          <---------AHL20(2)                   --------->ARR11(3)       <-----------GT1            --         <---------AHL20(1)                    --------->AHL20(1)   --------->ARR11(3)       --------         --------->AHL20(2)                    <---------AHL20(1)   <---------GLK1(2)<---------ANAC55(2)         <---------AHL20(2)                  --------->ANAC58       <---------ARR11(3)       --------         --------->AHL20(1)  <-----------HVH21 <---------ARR11(3) <---------TOE1(3)  ----------->GT1-    --------->YAB1 --------->ICU4            --------->ANAC58     <---------TOE2(3) <---------ICU4<-- ---------AHL20(2) <---------YAB1        <---------YAB1<---------AHL20(2) <-----------GT1    <-------   ttttaatcaaatttaattgtgatgattacaatgtcaattggttatgcaagatattaattaatatgtttaagatttttcacttttaataagtaaaataaaa  9939500                                                                                                    -                                                                                                    -                                                                                                   --                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                  <--                                                                                                  <--       --------->AHL20(2)                                                                         <--       <---------AHL20(2)                                          ---------->DOF2                ---      --------->AHL20(2)                                          <---------AHL20(2)              <-- ---------ID1                     ----------->GT1            <---------AHL20(2)                   --- ------->ANAC58               ---------->DOF2                --------->ARR11(3)                  ---- --------ANAC55(2)        ----------------->AG               <---------AHL20(1)               ------- ------->ANAC46           =========================================================================== ------->ANAC58           ----------------->AGL1             <---------ARR11(3)             <-------- ->AHL20(2)         <---------ARR11(3)                       --------->AHL20(2)            --------->WRKY12 ->AHL20(1)         --------->ARR11(3)                       --------->AHL20(1)            --------->WRKY38(1) -------->TOE2(3)  --------->YAB1----------->GT1            --------->AHL20(2)             --------->WRKY45 -----TEIL      ---------->DOF2 --------->DAG2    <---------AHL20(2)                     --------->YAB1 --AHL20(2)    ------>ZmHOX2a(1)<---------TOE2(3) --------->AHL20(2)    --------->WRKY12--------->ICU4   tacgtcaaaaaaatttcctaaagataatgccaaaaaggttaaattatagaaattaaactaaaatatattaaaagttgacttaaaaatgcaatgttgacca  9939600   --------->STY1(1)   <---------STY1(1) ----->MYB46(1)            <---------LBD16 ----->MYB83             --------->GLK1(2) ------->ORA47(1)        <---------ARR14(2) ------>DEAR4(1)         --------->ARR14(2) ------>DEAR3(1)         ------->TEIL--------->GLK1(2) ------>DREB2C(2)        <---------ARR11(1) ---->GAMYB             <---------ARR14(1) -------MYB111(2)       <---------CCA1(2) -------MYB46(2)      <---------------AGL15 -------MYB55(2)      --------------->AGL15 ------>MYB46(3)     <-----------------AGL1                                                   ------- -------MYB111(1)    ----------------->AGL1                                         <-----------GT1 -------->HVH21      <-----------------AGL2                    <---------ICU4      <---------ZAT14 ----->DEAR3(2)      ----------------->AG                     --------->ICU4       --------->ZAT14 -->MYB46(3)        <---------At5g28300                     ---------->DOF2       <----------DOF2 --- ======================================MADS_MADS    --------->At4g35610----------->TBP      <-------- -WRKY18(1)        <-----------GT1  <---------GLK1(2)    --------->At4g35610      <---------DAG2 ----   ccgacctaggggaaaacaaatttaccgtatctgggatagaatctcttctgtatcatctcagataaagattactacataaacacactttacagttttacga  9939700                      --------->AHL20(2)                    ----------->GT1                --------->LBD16        *TSS  <---------HSFB2a(2) -->ANAC46    <---------LBD16--------->TOE1(3)           <-----------GT1 --->NtERF2   --------->HSFB2a(2)                       <-----------GT1                             < ---GT1------------>CBF      --------->TOE2(3)  <---------ARR14(2)          <---------CCA1(2)       - ----->DEAR3(1)--------->LBD16        <<<<<<<<<<<<<<<<<LFY               <---------ATHB12 <<<<<<<<<TBF1   cgcccaaaattcaattcccggagattaaaaaccctaaaacaaacactggcgattcgattttccctcccaattcaaatcatctcttaatcttcttcttctc  9939800                       ------>ZmHOX2a(2)                      <------ZmHOX2a(2)                     --------->ARR11(3)                     --------->ARR14(2)                     <---------ARR11(3)                 --------->ABI4(1)                 <---------ATERF1(1)                 ------>NtERF2                 --------->LBD16                <---------ATERF1(2)                --------->ATERF1(2)                --------->RAP2.3(2)                <---------DEAR3(1)                --------->RAP2.3(3)                --------->DEAR3(1)               --------->ATERF1(1)               --------->RAP2.3(1)               --------->ERF1               --------->ORA47(2)               --------->DEAR4(2)              <---------RAP2.3(1)              <---------ATERF1(1)          --------->ARR14(2)                         <---------HSFB2a(1)            --------->TOE2(3)          <---------GLK1(2)                          --------->HSFC1(2)             --------->TOE1(3)          <---------ARR14(2)        <---------YAB1   <---------HSFC1(2)       --------->ANAC46    ---    ==========================HOX2a_HOX2a            --------->HSFB2a(1)      --------->ANAC58    ---    ------>ZmHOX2a(1)<---------ARR14(2)         --------->ANAC58           <---------ETT(2)       ---    =========================HOX2a_HOX2a   --------->HSFB2a(2)          ------>ZmHOX2a(1)       <---- ---------ARR14(2) --------->DEAR3(1)  <---------GLK1(1)     <----------DOF2  --------->ANAC58  ----- -------->ARR14(2)<------NtERF2   --------->YAB1--------->ANAC58   <---------At4g35610        <------   actatcctctcaaattcgccgccgatcttccatcaattttgatttctcgcaccgaaatttcgacttttcatctcctatcgacgaaaccctaatttttcac  9939900     --------->GLK1(1)  --------->LBD16                                                              --------->HSFC1(2) <---------HSFB2a(2)                                                      <---------------------WRI1 --------->HSFB2a(2)                                                      <------NtERF2 ------>ANAC58                                                          <---------DEAR3(1) ------>ANAC58                                                       --------->MYB52(2) ------>ANAC46                                  --------->TOE2(3)   --------->SPL7 -----ALFIN1                                  ------->TEIL       --------->TOE2(1) ---->ZAT6                                  <---------SPL7       --------->TOE1(1) -----GT1    <----------DOF2            --------->ANAC46    <-----------GT1    <---------HSFC1(2)   actccagaaatcgaactttgacgacgatgttaatggctaaacccgacgtaccttcatcgattttacctcgttcgtcgtcgatacttcccaactcgatcga  9940000                                                                                                    <                                                                                                    -                                                                                                 ----                                                                                                 <---                                                                                           --------->YAB1                                                                                          <---------YAB1                                                                                        --------->YAB1                                                                                       <---------YAB1                                                             ---------->ID1            --------->ICU4                                                           <---------ANAC58          --------->YAB1<-                                               --------->ATHB12                     --------->ICU4 --                                     <---------ICU4        <---------ANAC58     <------NtERF2   -----                                     --------->YAB1     <----------DOF2     ------>ZmHOX2a(2)   <----                                --------->AHL20(2)    <----------DOF2      <------ZmHOX2a(2)  -------                              ----------->GT1 <---------ATHB12            <---------ARR11(3) <-------   aaccctagatgagaacgagtcgattgaagcacaagttaataatgttcagtcattggctctttcgtccccaaatcgagatcgcagcgatgatgatgataat  9940100         --------->ATHB12      <---------ICU4      --------->YAB1     --------->ICU4   --------->YAB1   <---------ICU4                     <---------YAB1  --------->ICU4                  <------ZmHOX2a(2) ---------ICU4                    =================================HOX2a_HOX2a -------->YAB1              --------->DEAR3(1) ----->YAB1                --------->ATERF1(1)                               <---------ANAC58 ------ICU4               --------->LBD16                           --------->ARR14(2) --------YAB1             ------>NtERF2--------->YAB1               ------->TEIL ------->ICU4             <---------ATERF1(1)                       <---------ARR14(2)        <------ZmHOX2a(2) ---->ICU4              <---------LBD16--------->ATHB12       ----------->HVH21          ------>ZmHOX2a(1) -----YAB1 --------->ARR14(1)------>NtERF2                  --------->At4g35610          ============ -->YAB1<---------YAB1--------->ARR14(2)   <---------ANAC46 <---------At4g35610<---------MYB52(1) --YAB1 --------->ICU4<---------ARR14(2) <---------ANAC46   ------>ZmHOX2a(1)<---------ANAC58 <------   aataataatcatgattcggtttcaattccgcctccgatctatgatgggtatagctcttcttcctctgacgaatcccagtccgttccttctcctccgatca  9940200  Previous    Next  AGI:  At4g17890.1    Description:  AGD8 (ARF-GAP DOMAIN 8); DNA binding. Identical to Probable GTPase-activating protein 8 (AGD8) [Arabidopsis Thaliana] (GB:Q8H100;GB:O49688;GB:Q2V3H4;GB:Q682W5;GB:Q9C5L0); similar to AGD8 (ARF-GAP DOMAIN 8), DNA binding [Arabidopsis thaliana] (TAIR:AT5G46750.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63407.1); contains InterPro domain Arf GTPase activating protein; (InterPro:IPR001164) Range:  from: 9937035    to: 9939506    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g17895.1    Description:  UBP20 (UBIQUITIN-SPECIFIC PROTEASE 20); ubiquitin-specific protease. Identical to Ubiquitin carboxyl-terminal hydrolase 20 (UBP20) [Arabidopsis Thaliana] (GB:Q9FPS7;GB:O49688); similar to UBP21 (UBIQUITIN-SPECIFIC PROTEASE 21), ubiquitin-specific protease [Arabidopsis thaliana] (TAIR:AT5G46740.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63406.1); contains InterPro domain Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2; (InterPro:IPR001394) Range:  from: 9939708    to: 9942785    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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