Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            --------->YAB1          --------->TOE2(3)          ------->GAMYB          =======================================MYC_MYB         --------->MYB46(3)        =========================================MYC_MYB        ------>MYB83        ------>MYB46(1)        --------->ANAC58        -------->P        --------->ANAC58       ------>MYB83       ------>MYB46(1)     <---------MYB59     --------->MYB46(3)                <---------ANAC55(2)    --------->ANAC58             <---------TOE2(3)    --------->ANAC46           <---------AHL20(2)    --------->ANAC58    =========================bZIP_DOF  <-----------GT1       ---------->DOF2--------->O2 --------YAB1        >>>>>>>>>RAP2.2   =====================================bZIP_DOF ------>AHL20(1)   <---------ARR11(3)  <---------O2                                                <- -------AHL20(1)   --------->ARR11(3)  --------->TGA1a                                     --------->AHL20(2) ------>AHL20(2)  --------->GLK1(1)    <---------TGA1a           ---------->DOF2           <---------AHL20(2) ----->YAB1     --------->YAB1 --------->AHL20(2)           --------->MYB46(3)            --------->YAB1   tataatacccaaccaaaatgatatctaaaagaattaatgaaacgtgagtatatttgttttcaacgactaaagaaacatataaacaaaacttataaaaata  9928300                                                                                             <-------                                                                                         ------>MYB83                                                                          <-----------GT1------>MYB46(1)             <---------ICU4               --------->ANAC46   <---------ARR11(3)        --------->TOE1(2)          --------->YAB1             <----------ID1          --------->ARR11(3)------>MYB46(1)         <---------YAB1        --------->AHL20(2)          <---------TOE2(3)   ------>MYB83  -------- --------AHL20(2)             --------->AHL20(2) <-----------GT1     <---------AHL20(2)--------->TOE2(2)   tgaaattgtttttgataatttcaaatgacaaaataaaaaactacaaacaattttcatctctaagatttcatttttttcaccaaataaaacctacgaatat  9928400                           <---------ALFIN1                          <---------ZAT14                          <---------ZAT18                          --------->ZAT14                         <---------ALFIN1                        --------->ANAC46                      <-----------GT1                 <---------AHL20(2)                 --------->AHL20(2)                                              --------->ANAC55(2)            <---------AHL20(2)                        --------->ANAC58           ----------->GT1            --------->AHL20(1)                        --------->ANAC58           <---------ANAC55(2) --ARR14(2) <---------AHL20(1)           ---------->DOF2                  --------------->AGL15<----- ->ARR14(2) --------->AHL20(2)  <----------DOF2       --------->ANAC46    ===========================   gagttcttaaacaataaaataaaatcaccacactctttaaaaaaaaagaaacttatacgaaaataagacttattctcttgaataagtaacaaatccaata  9928500                                                                                           <---------ANAC58                             <---------AHL20(2)                                            <---------ANAC58                             --------->AHL20(2)                                      --------->AHL20(1)                           --------------->AGL15                                     <---------AHL20(1)                           <----------DOF2                                          <---------AHL20(2)                       <----------DOF2                                           ------->TEIL<-------                 <-----------HVH21                                            --------->ANAC55(2)                --------->bZIP60(2)           --------------->AGL15           <---------ANAC55(2)                --------->ANAC46              <---------------AGL15           --------->ANAC58               --------->LBD16             --------->GLK1(2)          <---------ALFIN1<---------AHL20(2)        <---------GLK1(2)  ===================================MADS_MADS       <---------ANAC46 ----ATHB12   <-----------RAV1(2)         <---------GLK1(2)   <-----------GT1 --------->ANAC58  <---- ==========================================MADS_MADS        <-----------GT1  <---------TOE1(2)  <----   gtttataacagaaactccaggtcatctttctttaaatataaacagattccattttttgcattatacacccttccactctcacgtatatatatttcttact  9928600                <---------AHL20(2)                <---------YAB1               --------->AHL20(1)               <---------AHL20(2)               --------->AHL20(2)               <---------AHL20(1) ----GT1      --------->YAB1         <---------At4g35610                --------->ANAC46 -----DAG2--------->AHL20(2)<-----------GT1                       --------->GLK1(1)        *TSS ------DOF2<---------AHL20(2)      --------->REM1(1)  ----------->RAV1(1)       ---------->DOF2   ---   ttacccttactatttaatataattccatgtttacccttcatcttccctctaaaatccaacacagagagatttcaacgctaaataaagagagagagagtct  9928700                                                                                       --------->CCA1(2)                                                                                       <------ZmHOX2a(2)                                                                                      --------->ARR11(3)                                                                                      <---------ARR11(3)                    ----------->GT1                                                   <---------ARR14(2)         <------NtERF2                                                                --------->ARR14(2)       <---------DEAR3(1)------->TEIL          --------->AHL20(2)                     --------->AGP1 ------->DOF2       --------->YAB1     ----------->GT1                            ---------->DOF2   aaaagctcgtcgtcgtcttcaatggtgaatctcaaaccaattggataaataaaacaaaacaaaaaaaacttcacaaaaaaaaaaaaaagatccaaattac  9928800                                                                                      <---------At4g35610                                                                                      --------->At4g35610                                                                                 --------->LBD16                                                                                <-----------RAV1(2)                                                                              <------ZmHOX2a(2)                                                               <---------ALFIN1 <---------LBD16    --                                                         --------->GLK1(1)   --------->ARR14(2)  ----                                ------>ZmHOX2a(2)      ------>NtERF2         <---------ARR14(2)  ----                              --------->MYB52(1)      --------->DEAR3(1)------>MYB83  <---------ZAT2                            <---------HSFB2a(1)    ------->GAMYB        ------>MYB46(1)          ----                 --------->ZAT6<------ZmHOX2a(2)  --------->MYB46(3)    -------->P <------ZmHOX2a(1)<   aaccatgccttcggagttaacaccagaagaacgatcggaactaaaaaactcaatcgccgagttccacacataccaactcgatccaggaagctgttcatca  9928900                          --------->LBD16                         <---------HSFB2a(2)                         --------->HSFB2a(2)                       ------>NtERF2                      --------->DEAR3(1)                     --------->ATERF1(1)                     <------NtERF2            <---------ARR14(2)            <-----------ARR10--------->GLK1(1)            ------->TEIL<---------LBD16            --------->ARR14(2)         <---------MYB52(2) <---------ARR14(2)         --------->MYB46(3) --------->ARR14(2)       --------->MYB52(1)--------->ANAC46    --------->ANAC58 --------->DEAR4(2)    --------->ANAC46------>NtERF2    --------->ANAC58<---------ATERF1(1)              <---------ARR14(2)   ------->MYC2    --------->ANAC58             <---------TOE1(1)   <-------PIF5    --------->ANAC58             <---------TOE2(1)   <-------MYC2    --------->ANAC46            --------->SPL7   ------->PIF5   ------->MYC2               --------->TOE2(2)   ------->MYC3   <-------MYC2               --------->TOE1(2)                                     --   <-------MYC3   <-------MYC3               <---------SPL7                                        <-  --------->ANAC46------->PIF5              --------->YAB1                                        <-- ------->ZAT14    ------->MYC3             <---------ATHB12                                   <------ ----->ANAC58     <-------PIF5           --------->WOX13(1)     --------->TOE2(3)            ------>ZmHOX2a(1) ----->ANAC46    --------->ANAC46       <---------WRKY38(1)  --------->ANAC58            <---------ARR14(2) ----->ANAC58    --------->ANAC58      --------->WRKY18(1)   --------->ANAC58            --------->ARR14(2) ---------ALFIN1 --------->ANAC58    ----------->GT1 --------->ARR14(2)       <---------ALFIN1-------   ctccacgcgcaacgaatccacgcgcctccggaactcgtctggtcaatcgtacgacgattcgacaaaccacaaacatacaaacacttcatcaaatcctgct  9929000                                        <---------ANAC55(2)                                        --------->TGA1a                                        <---------ANAC46                                        <---------O2                                        --------->ANAC55(2)                                        --------->O2                                        ===============================================MYC_MYB                                   --------->ANAC58                                   --------->ANAC58                                   --------->ANAC46                                  <-------MYC2                                  ------->MYC2                                  ------->PIF5                                  ------->MYC3                                  <-------MYC3                                  <-------PIF5                                  <-------PIF4                                  ------->PIF4                                 --------->ANAC58                           <-------GAMYB<---------TGA1a                           =======================MYC_MYB                           --------->At4g35610                          <---------MYB46(3)                          <---------DEAR3(2)                         <---------ANAC46 ----------->HVH21                 --------->MYB52(1)                        <------NtERF2   --------->bZIP60(1)     --------->LBD16  ---------->DOF2                       <-----------HVH21<---------bZIP60(1)    --------->ATERF1(2) ------->LBD16      <---------ANAC58    --------->bZIP60(2)   <---------LBD16 --------->ANAC46 ----------HVH21    <---------ANAC58 ----------->HVH21       --------->MYB52(1)------->GAMYB        - -------ANAC46     <-------TEIL ------->TEIL  ------>ZmHOX2a(2)<---------ATERF1(2)             ------ ---ZAT2      --------->HSFB2a(2)--------->ANAC58   --------->ATHB12   <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3) -->ZAT2      <---------HSFB2a(2)--------->ANAC46  <---------YAB1     <---------ALFIN1      ---------   ccgtcgaacaaaacttcgagatgcgcgtcggatgcacgcgcgacgtgatcgtcatcagtggattaccggcgaacacatcaacggaaagactcgatatact  9929100                                                                                                  ---                 <---------LBD16                                                        <---------HSFB2a(2)                 ----------------->AGL1                        <---------ARR14(2)       --------->HSFB2a(2)                <---------At5g28300   <------NtERF2            --------->ARR14(2)  <---------DEAR3(2)     --------->MYB52(1)               <-----------------------TaNAC69(2)      <-------TEIL ----------    <---------SPL7   --------->ARR14(2)           ----------->TGA1            --------->ABI4(2)   ---   <---------MYB52(2)<---------ARR14(2)           ----------->HVH21        <---------DEAR3(2)     <-- ------>NtERF2  --------->MYB52(1)    --------->ATERF1(1)      ------------>MYB.PH3(1)  <---------HSFC1(1) -------->DEAR3(1) --------->LBD16  <---------DEAR3(1)        <---------GLK1(1)    <---------MYB46(3) --->ANAC46    <-----------GT1  --------->At4g35610       <-----------GT1 <---------DEAR3(1)     <--- >ARR14(2)  <---------ZAT6   <---------YAB1     --------->At4g35610 <---------MYB52(1)  --------->HSFC1(1)   cgacgacgaacggagagttaccggattcagtatcatcggaggcgaacataggctgacgaattacaaatccgttacgacggtgcatcggttcgagaaagag  9929200  Previous    Next  AGI:  At4g17870.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G46790.1); similar to Streptomyces cyclase/dehydrase family protein [Brassica oleracea] (GB:ABD65175.1); contains InterPro domain Streptomyces cyclase/dehydrase (InterPro:IPR005031) Range:  from: 9928691    to: 9929531    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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