Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      <----------DOF2                                    <---------DAG2                                   <---------DAG2                                ---------->ID1                                <-----------GT1                               <-----------GT1                           <---------CCA1(1)                                                        <                           <---------RVE1(1)                                        --------->TOE2(3) -----WOX13(1)            <---------GLK1(2)                                       <---------TOE2(3) - --YAB1                   --------->ARR11(3)  ------>ZmHOX2a(1)<---------YAB1     <---------TOE1(3)<- --TOE2(3)                <---------ARR11(3)<------------------------ANAC81  <----------DOF2  -------   tgatcacttctctagttttatttatgaagattttttcccttttctctccttcaattgtgttgattttgtttgctctgttcttttatcgttagaaaatcac  9922600 --------->TOE2(3)                                                           <---------YAB1 ---------ICU4                 ------->TEIL                     <---------YAB1 -------->YAB1              <---------YAB1         <-------TEIL<---------TOE2(3)<---------TOE2(3) --------ATHB12  --------->MYB52(2)             <---------MYB46(3)          --------->TOE2(3) -->YAB1       <---------MYB52(1)<-----------RAV1(2)     <---------YAB1   <-------TEIL             --   aatcatcaattctattagttagttcttcttatgaatcaggttttaaatcgtggttcattactattgatgtttgagattcattaatgttttagtttttttt  9922700                                                                                        --------->YAB1                                                                                      --------->ARR11(3)                                                                                      <---------ARR11(3)              --------->ARR14(2)                                                     --------->YAB1              <---------ARR14(2)                                            <---------ICU4           --------->LBD16                                                 --------->ICU4          <---------LBD16                                                --------->WOX13(1)        <-------TEIL                                            --------->ARR11(3)  <---------YAB1       --------->GLK1(2)                           <---------GLK1(2)   ------------>CBF<---------YAB1       --------->CCA1(2)                    --------->AHL20(2) --------->YAB1 <---------YAB1       --  ---------->DOF2                     --------->ANAC58        <---------YAB1--------->YAB1        <-- ------->TOE2(3)                      --------->ANAC58      --------->YAB1 <---------ATHB12<---------   ttcttaaagattcagggatttggactctaatagatttgtcaagaaataatatagaatatcaactatgattttgaacaatcatgactatgatcatattgtt  9922800                   --------->ATHB51                   --------->AHL20(2)                  <---------MYB52(1)             --------->bZIP60(1)                                                                <----          ----------->HVH21------>ZmHOX2a(1)                  <-----------GT1          <---------ARR11(3)   ---------->DOF2<---------YAB1                     --------->GLK1(2)<---------ARR11(3)   <---------AHL20(1) ----->TEIL  <---------bZIP60(1)                     ------->TEIL     --------->ARR11(3)   --------->AHL20(1) -------CCA1(2)   --------->ICU4                     <---------ARR14(2)                --------->ARR11(3) ---CBF ----------->GT1<-----------GT1               --------->ARR14(2)  <----------DOF2--------->CCA1(2)   gtatctaaagaggtgacaccattattttcctctaagaacacatatgacttaaacgaatctgatattacagaacatctttctcagaagtagatatatatta  9922900                                                                      <---------ANAC55(2)                                                                      <---------ANAC46                                                                      <---------ANAC58                                           ----------->GT1            --------->ANAC55(2)                                          --------->AtLEC2            <---------ANAC58                                        <---------AtLEC2        --------->AHL20(2)                                    --------->GLK1(1)           <---------AHL20(2)                                    <---------GLK1(1)        ----------->GT1                           <---------CCA1(2)            --------->AHL20(2)               --------->ATHB12<----------DOF2          <---------AHL20(2)    --------->ANAC55(2)              --------->ICU4<---------ARR11(3)          <---------YAB1<---------ANAC55(1)              <---------YAB1--------->ARR11(3)         <---------AHL20(1)    <---------TOE2(3)            <---------ICU4<---------ARR11(3)           --------->AHL20(1)   <-----------GT1            --------->YAB1<---------AHL20(1)           --------->AHL20(2)------->TEIL               - -------GT1--------->ICU4 --------->ARR11(3)         ------->TEIL   <-----------GT1          <------ZmHOX2a(1)   tccatttctgttcatcatgatggaagaatatatctttgatttccatggaaaaatgaatataattagttaattacgtatttacgtttttagaatgaggagc  9923000             --------->ZAT18                                              --------->YAB1         <---------TOE1(2)                                                <---------ICU4   --------->bZIP60(1)                                                   <---------ATHB12   <---------bZIP60(1)               ----------->GT1                --------->ANAC46 ---------->HVH21  <---------YAB1    <---------ZAT6        <---------At4g35610   aaatgacatcgtatgtgcagcatgatggtgatggcgatagtgttaaaaatgcagaagttgcagaggctatactcaatgataacaatgaactgtctcatat  9923100                                         --------->ARR14(2)                                     <---------At4g35610                          --------->AHL20(2)                          <---------AHL20(2)                                                     <---                          <---------YAB1 <---------ARR14(2)                                      ----                         <---------AHL20(2)                                              --------->ARR11(3)                    --------->AHL20(2)   <-----------ARR10                              --------->ATHB12                    <---------AHL20(2)<---------ANAC46                                 --------->ICU4                --------->ATHB12     <---------LBD16                                   <---------YAB1                <---------ICU4 <---------AHL20(2)                                    --------->YAB1               --------->ICU4  --------->AHL20(2)      ------->TEIL                  <---------ICU4               <---------YAB1 <---------AHL20(2)      <---------AtLEC2              --------->ICU4             --------->YAB1   --------->AHL20(2)    <---------YAB1                  <---------ATHB51            <---------AHL20(2)<---------AHL20(1)<---------ANAC58         ----------->GT1<---------ICU4      ----------->GT1    --------->AHL20(2)     <---------ANAC58     <---------YAB1 <---------ATHB12-   tgagcgagaagtatataatgattttattttaattaatttagcggatattagcttatgcatgttatcgatatatgatggtatatcaaataatgattttgca  9923200                                                                                   --------->ANAC58                                                                                   --------->ANAC55(2)                                                                         --------->ZAT18                                                                      <------MYB83 --------->ANAC58                                                                      <------MYB46(1)                                           <---------ANAC58          --------->ALFIN1                                           <---------ANAC58          <---------AtMYB61                                         <---------AHL20(2)          --------->MYB111(1) <---------AHL20(1)                                         <-----------GT1        --------->LBD16    --------->ANAC55(1)                                      <---------ICU4          <---------LBD16      <---------ANAC55(2)                                 <---------YAB1              ------->GAMYB         --------->ANAC46                               --------->CCA1(2)           --------->At4g35610    <-------TEIL             <-------TEIL  <---------TOE2(3)               <---------At4g35610  --------->TOE2(2) ------At4g35610 ------->MYC3 --------->ARR14(2)    <-----------RAV1(1)  <---------ZAT18 --------->AHL20(1) ----->At4g35610 <-------MYC3 <---------ARR14(2)   ------>ZmHOX2a(2)<--------P  --------->TOE1(2) -------->MYB52(1)--------->ALFIN1  ------->TEIL  <---------At4g35610<---------MYB46(3) --------->ICU4   gataactgtttgtgatacatgtggtgatcaaggatatgaatatttacttgtgatctgttgcaactgcggagttggtgcagaacatacgtaatattttttg  9923300                  <-----------GT1              <----------DOF2                                     --------->YAB1        --------->ANAC58                                         <---------YAB1        --------->ANAC55(2)                              <---------ARR14(2)                      ----        <---------ANAC55(2)                              --------->ARR14(2)                <---------ANAC58        --------->ANAC55(1)                              <---------ARR11(3)           <---------ICU4        --------->ANAC58                                 --------->ARR11(3)           --------->ATHB12        --------->ANAC46                                 --------->GLK1(2)           --------->ICU4       <-------TEIL                                     --------->RVE1(1)      <---------YAB1 -------     <---------ARR14(2)                                 <---------GLK1(1)   <---------YAB1 <---------ANAC58     --------->ARR14(2)                                ------->TEIL   <---------AHL20(2)   <---------AtLEC2   tcaacaatatacgtaacttttaactatgccattagatagtagcattgtttttatatgaatatctgttatcatttttttgttattgtagttattgcatgat  9923400                          <------MYB46(1)              <---------At4g35610                      <---------MYB46(3)               --------->At4g35610                      --------->MYB52(2)              <-------TEIL                              -----                    <---------MYB52(1)        ---------->DOF2                                   -----                  --------->LBD16        <---------ZAT14                                        <----                 --------->HSFB2a(2)     --------->ZAT14                                        -----           --------->DAG2 <------MYB83   <---------ZAT18                                        <----           <---------TOE1(3)             --------->ZAT18                  --------->DAG2     -------- ------->GT1     <---------HSFB2a(2)  --------->RAP2.6(3)                ---------->DOF2    --------- -->ATHB12 <---------TOE2(3)        <---------YAB1   <--------P<---------------------WRI1   ---------   ggaaaaaatagataaggttcccgatagttggtcttgctatgactgcactaaagaggtagatgaaatgcgagaagaaaaaggaaatgaagaaaccagctct  9923500  Previous    Next  AGI:  At4g17850.1    Description:  zinc ion binding. similar to PHD finger family protein [Arabidopsis thaliana] (TAIR:AT5G16680.1); similar to hypothetical protein 23.t00063 [Brassica oleracea] (GB:ABD65621.1); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011) Range:  from: 9923003    to: 9923863    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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