Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         <-------TEIL                                   <---------AHL20(2)             --------->ATHB12     <---------AHL20(2)             --------->ATHB51     --------->AHL20(2)            <---------YAB1    --------->AHL20(2)      <---------AHL20(2)     <---------AHL20(2)     <---------AHL20(2)     --------->YAB1                                         ------>MYB46(1)  --------->AHL20(2)     --------------->AGL15           <---------AHL20(2)        ------>MYB83  <---------AHL20(2)     ------>ZmHOX2a(1)              --------->AHL20(2)        --------->MYB52(1) --->ANAC46 <---------AHL20(2)<---------AHL20(2)    <---------YAB1        ---------->DOF2 --------->CCA1(2) -->ZAT18 --------->YAB1 <---------------AGL15--------->WOX13(1)<----------DOF2  --------->TOE1(2)   ctatttttttatttataattgggcttcctatattaattaaatgcatagcaatctatgatttaatgtctttttgtaacaaagtaccaacgaagatagaaga  9906500                    --------->HSFB2a(2)                    <---------HSFB2a(2)               <---------ZAT6           <---------ZAT14      --------->DAG2                               <---------AHL20(2)           --------->ZAT14     ---------->DOF2                 --------->AHL20(2)           --------->REM1(2)--------->ANAC58             --------->At4g35610 --------->AHL20(2)          --------->ALFIN1  <---------ANAC55(2)    ---------->DOF2          --------->ICU4       --------->DAG2       --------->ANAC58     <---------HSFB2a(2)     <---------AHL20(2)       <--      ---------->DOF2  ---------->DOF2           --------->HSFB2a(2)     --------->AHL20(2) ---------   acacacctaaaagtgtagagttctataaagacgtaaagtttatgtaaatttctgaaagtagctaaatatatgtaagtaattaatagaaaatgagatttca  9906600                                                                    <---------AHL20(2)                                                               --------->AHL20(1)    <---------DAG2                                          ----------->GT1    <----------DOF2                             <---------AHL20(2)  <---------AHL20(1) <-----------GT1                      <---------ZAT14     ---------->DOF2 -------ICU4                          --------->ZAT18 ---------->DOF2<---------YAB1 >GLK1(1)                        <---------YAB1--------->AHL20(2)   --------->AHL20(1)            ---   tttttacttttctaacatatataagttactaaaatatgtttgcactggatttaatagaaagaaagtatattatatttgcaaattttgaattatacatgtg  9906700                                        <---------YAB1                       --------->ANAC46 <---------TOE2(3)                              --------->ZAT18              --------->ZAT18         --------->YAB1                                  ----------->HVH21              <---------ZAT18     --------->AHL20(2)                                <---------ANAC55(2)              <---------ZAT14     --------->AHL20(1)                   <---------CCA1(1)            -            --------->ZAT18       <---------AHL20(2)                   <---------RVE1(1)    ------>MYB83         --------->ALFIN1 ----------->GT1----------->GT1              --------->ARR11(3)    ------>MYB46(1)  --------->YAB1     --------->ZAT6  <---------YAB1                   <---------ARR11(3)  <---------MYB59 ------>ICU4<---------ZAT18       <---------AHL20(1)<----------DOF2  --------->YAB1 --------->ANAC55(2)   ataatcaaaatgtgtgtgctcttacactcagtaaaatttattatggtaaaatttctttcatttactgaaaatgatattttgaagataagtgacctatcta  9906800                                                       -------->P                                                       ------>MYB46(1)                                                       ------>MYB83                                                      --------->MYB55(1)                                                     --------->DEAR3(1)                                                     <---------MYB46(2)                  <----------DOF2                    <---------ALFIN1        <---------ANAC58              <-----------GT1--------->MYB46(3)        <---------ANAC58         <---------AHL20(2)  <---------MYB111(1)        <---------ANAC46      <------------CBF       <---------MYB55(2)       <---------LBD16       --------->ATHB51        <---------MYB111(2)   <---------AHL20(2)        --------->ATHB12        --------->AtMYB61  <---------AHL20(1)        <---------YAB1          --------->MYB46(3)  <---------ARR11(3)      <---------AHL20(2)     --------->MYB46(3)                               <--  --------->ARR11(3)     --------->ICU4      <---------YAB1  *TSS    <---------YAB1         --------- ------>TEIL <-------TEIL--------->AHL20(2)<---------ICU4------->GAMYB  <---------YAB1      <--------   tgtatatatttcgggtccatctttatatttattattgaatttacatcattatccaccaaccccatcttcttcttattcttcatcttctactgagatttct  9906900                                        <---------AtLEC2                                    <---------MYB46(3)                                   --------->ALFIN1                                      ------->TEIL                                   <---------DEAR3(1)                                 <---------YAB1                               ------->TEIL  ------->TEIL >>>>>>>>>MYB98           --------->ICU4 --------DOF2                 --------->MYB52(1)--------->ALFIN1                   <---------YAB1 >GLK1(1)             --------->TOE2(3)<-------TEIL--------->TCP20               --------->YAB1 -GLK1(1)           <---------YAB1 <---------AtMYB61  --------->TOE1(3)       <------ZmHOX2a(1)   ctttttttttcaaaaaaaactcatccttgaatgaacggtggtgcatggatgtggaaccctaacaaaattgaagaattggaggatgatgatgaatcttggg  9907000                                                                                              <------                                                                                              <------                                                                                            <--------                                                                                            <--------                                                                                        --------->GLK1(1)                                                                                        <---------GLK1(1)                                                                                       --------->MYB52(2)                                                                                     <---------MYB52(1)                                                                                    --------->At5g28300                                                                                    --------->LBD16                                                                                    <-----------HVH21                                                                                   <---------ANAC46                                                                                   <---------TGA1a                                                                                   --------->TGA1a                                                                                   --------->O2                                                                                   <---------O2                                                                                  <------NtERF2                                                                                 <---------RAP2.6(3)                                                                --------->ZAT6   ------>NtERF2-------                                                            ------>ZmHOX2a(2)   --------->RAP2.3(2)                                                          --------->ARR14(3)    --------->DEAR3(1)                                                          <---------ARR11(3)    <---------ATERF1(2)                               --------->REM1(1)          --------->ARR14(2)    --------->RAP2.6(2)                             ----------->RAV1(1)          --------->ARR11(3)    --------->ATERF1(2)                --------->ANAC46                          --------->AGP1       --------->RAP2.3(1)                --------->ANAC58             <---------O2 <---------ARR14(3)   --------->ATERF1(1)                --------->ANAC58<---------ARR11(3)        <---------AGP1      <---------At4g35610        <----------DOF2   --------->ANAC46   --------->O2 <---------ARR14(2)  --------->At4g35610 ---  ---------->DOF2      ---------->DOF2     <---------ALFIN1<------ZmHOX2a(2) <-----------RAV1(1)  <--   aagtcaaagcctttgagcaagacactaaaggcaacatctctggtaccacttggcctccaagatcttacacttgcaatttctgccgccgtgagttccgttc  9907100                                                                                   <---------RAP2.6(2)                                                                                   <---------DEAR3(1)                                                                                   <---------ANAC46                                                                                  <---------LBD16                                                                                  <------NtERF2                                                                                  --------->At4g35610                                                                                  --------->ATERF1(1)                                                                                  <---------At4g35610                                                                                 <---------RAP2.3(1)                                                                                 <---------ERF1                                                                                 <---------ATERF1(1)                                           ------>NtERF2                       --------->ATERF1(1)                                        <---------ATERF1(1)                    --------->ZAT2                                    ----------->HVH21                          <---------At4g35610                                  ===============================================MYC_MYB                                  <---------TGA1a                              --------->At4g35610                                  --------->O2                                 <---------ZAT2                                  --------->TGA1a                              ----------->RAV1(2)                                  <---------O2                                <---------RAP2.3(1)                                ------>NtERF2                                <---------RRTF1(2)     -                                --------->ABI4(1)                            <---------ANAC58       <                               =============MYC_MYB                          <---------ANAC46      <-                               --------->DEAR3(1)                            <---------ANAC58      --                               ------->GAMYB                                 <---------RAP2.6(2)   <-                               --------->DREB2C(2)                           <---------RAP2.3(2)   ==   --------->ANAC58           --------->MYB46(3)                            <---------LBD16        --   --------->ANAC58           --------->DEAR3(2)                          <---------MYB52(1)    ----- ---ARR14(2)                 <---------ATERF1(1)                         <-----------HVH21     <----- ---MYB52(1)                <---------ALFIN1<------NtERF2                <-------GAMYB         ------ -ANAC58                   --------->ETT(2)<---------ATERF1(1)           ============================ -ANAC58                   --------->ZAT18--------->ANAC46           <---------ALFIN1         ------- -->ARR14(2)  <-----------HVH21<---------ALFIN1                   <---------ARR14(2)        --------- ------>At4g35610      ------->TEIL<-----------HVH21              --------->ARR14(2)------>NtERF2<--- -------At4g35610 <---------ANAC55(2)<---------WRKY18(1)       <---------TOE2(3)<---------DEAR3(1)<--   tgctcaagccttaggcggtcacatgaatgtccaccgccgtgaccgcgcctcatctagggctcatcaaggttccaccgttgcggctgcggctagaagcggc  9907200       ----------->GT1                  --------->REM1(1) ------>PIF5                        <---------ANAC46 -------PIF5                      --------->WRKY38(1) --------TGA1a                   <---------MYB52(1) ------->O2                     <-------GAMYB --------O2                    <---------MYB46(3) =======================================MYC_MYB ------->TGA1a                 --------->DEAR3(1) ------>HVH21                ------>NtERF2 ------HVH21                 --------->LBD16                    <---------DEAR3(1) >NtERF2  <-----------GT1   --------->DEAR3(1)         <-----------GT1 ========MYC_MYB            <---------ALFIN1------->GAMYB      <---------LBD16                  <---- -->RAP2.6(2)              <---------LBD16 --------->ANAC46--------->ANAC46     <---------TOE2(3)  <- >At4g35610               <---------ATERF1(1)     --------->YAB1--------->ANAC46<---------TOE1(3)  -- ------ALFIN1      <---------ANAC58 <---------ANAC58 --------->YAB1  ----------->GT1   ---------->ID1 -------LBD16      <---------ANAC58 <---------ANAC58<---------YAB1 <---------ANAC46 --------------->AtSPL8   cacggggggatgttactcaattcttgtgctccgccgttgcctacaacgacacttataatacaatccacggcgagtaacattgaaggtttgtcccatttct  9907300                                                                                         <---------MYB52(1)                                                                                     ------>MYB46(1)                                                                                     ------>MYB83                                                                                   --------->AtMYB61                                                         <---------SPL7           <---------HSFC1(2)                                                       --------------->AtSPL8     <---------HSFB2a(1)                                                       <---------------AtSPL8     --------->HSFB2a(1)                                                       <---------------AtSPL3     --------->HSFC1(2)             <---------STY1(1)                     <----------DOF2               -------->P   ------->GAMYB                                --------->GLK1(2)    --------->ARR14(2)<---------ANAC58 ------>MYB46(1)                            --------->At5g28300      <---------ARR14(2)<---------ANAC58 --------->At4g35610                       ----------->GT1  --------->ANAC58 --------->ANAC58 ------>MYB83--------->STY1(1)          <---------bZIP60(2)--------->SPL7    --------->ANAC46 -------GT1--------->TOE2(3)         ----------->HVH21 <---------TOE2(3) ------>ZmHOX2a(1) --------MYB111(1)             --------->ICU4   ------->TEIL--------->ANAC58--------->LBD16 ------->MYB46(3)   <----------DOF2<---------At4g35610 --------------->AtSPL3--------->ANAC58   accaactgcaaaaccctagtggcatttttggtaattctggtgacatggtgaatctttatggtacgacttcgtttcctccgagcaaccttccgttttcaat  9907400  Previous    Next  AGI:  At4g17810.1    Description:  nucleic acid binding / transcription factor/ zinc ion binding. similar to zinc finger (C2H2 type) family protein [Arabidopsis thaliana] (TAIR:AT2G37740.1); similar to zinc finger (C2H2 type) containing protein [Brassica oleracea] (GB:ABD65171.1); contains InterPro domain Zinc finger, C2H2-like; (InterPro:IPR015880); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) Range:  from: 9906861    to: 9907670    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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