Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   --------->TOE2(3)         <---------AHL20(2)                                --------->ANAC46          <---------AHL20(2)          --------->AHL20(2)    --------->ANAC58          --------->AHL20(2)       --------->YAB1           --------->ANAC58         <---------AHL20(2)      <---------ATHB51          ----------->GT1<---------ZAT18      <---------ATHB12          --------->ANAC55(1)     --------->YAB1      --------->ICU4            <---------ANAC55(2)<----------DOF2                                 <- ------>YAB1                    --------->ANAC55(2)<---------DAG2               ----------->GT1 ----- ------YAB1           --------->YAB1          <-----------GT1     ---------->DOF2         <---------AHL20(2)   taatagcaataataaactatgcaatggtatccatacgtaaatttgtttttgcactttatattaattttaaaagaactgaaaatggtttatattttaaaat  9883000                                <---------ANAC55(2)                                <---------ANAC58                                --------->ANAC55(2)                                <---------ANAC58                                <---------ANAC55(1)                                <---------ANAC46                              <-----------GT1                           <---------ICU4                                                   <--------                          --------->ICU4                                                   <---------TOE2(3)                        --------->ANAC46                <---------ATHB12                   <---------TOE1(3)                        --------->ANAC55(2)        <---------MYB59                        <---------DOF5.7(2)                        --------->ANAC55(1)--------->ANAC58                             --------->DOF5.7(2) --------YAB1           <---------ANAC55(2)--------->ANAC58                            <----------DOF2 ---->ICU4         <------ZmHOX2a(1)      --------->TOE1(2)     <---------ZAT6    ---------->DOF2  --   tatgaaaaaaacatgtaaacaggaacacataattacgtctgaaacaagcgagacctaaatcatttagtgctaacaaaatagcataaaagctttaacgaaa  9883100                                                                                  --------->GLK1(1)                                                                                  <---------GLK1(1)                                                                                 <---------ARR14(2)                                                                                 --------->ARR14(2)                                               --------->ZAT14                 --------->LBD16 <-----           <---------ANAC58            <---------TOE2(3)                     <---------LBD16<------NtERF2           <---------ANAC58           --------->MYB52(1)              <-----------GT1      <------NtERF2 --ID1<---------ZAT6             <---------ANAC46                  --------->ARR14(2)      --------->LBD16 ------->AHL20(2) ----------------->AGL1       <---------ZAT18     <---------ARR14(2)    <---------LBD16   aaaaaatagtcttacttgttgccaaggagggcatggagtctaacgatagtactctcttctccatcggaaaatttgcctctccggatatcaggccggagat  9883200                   --------->At4g35610                   <---------At4g35610               <---------RAP2.6(3)               <-----------HVH21               ------>NtERF2              <---------ETT(1)              --------->DREB2C(2)              ----------->HVH21              --------->DEAR3(1)              --------->RAP2.3(3)             --------->DEAR3(2)             --------->RAP2.3(1)             <------NtERF2            ------>NtERF2                                     --------->DREB2C(2)            <---------ATERF1(1)                               --------->RAP2.6(2)            <---------At4g35610                               --------->ANAC58            --------->At4g35610                              --------->SPL7           <---------ARR14(2)                                --------->MYB46(3)           --------->ARR14(2)                               <---------ATERF1(1)         --------->LBD16                        --------->At4g35610       ----------->RAV1(2)                      --------->ZAT2------->GAMYB       <---------LBD16             <---------MYB52(1)     ----------->HVH21       ================================RAV      <---------At4g35610      --------->MYB52(1)       <---------At4g35610       --------->DEAR3(2)     <---------ALFIN1      ----------->RAV1(1)<---------ZAT18--------->DEAR3(2)                     <    --------->MYB46(3)    ----------------->AGL1<---------ZAT2--------->ANAC58                ------- ----ARR11(3)--------->ATERF1(1) <---------MYB46(3)   <------ZmHOX2a(1)                 --------->AHL20(2)   aattcatccaccggagccgacagctcttgccacagcggttaagtccagcgagcttaggaagcgaccgccaattcccataaccattctcgtttatataagc  9883300                                         --------->ANAC58                                 <----------DOF2                                 ==============================HOX2a_HOX2a                                 ------>ZmHOX2a(1)                    ------>ZmHOX2a(2)                           --------->ANAC58                         <---------ARR11(3)                           --------->ANAC58                         --------->ARR11(3)                        --------->MYB46(3)              --------->ANAC58        --------->YAB1 <------NtERF2     --------->ANAC58        --------->At5g28300  <---------At4g35610  <---------At4g35610              --------->ANAC58  --------->At4g35610  --------->At4g35610   <----------DOF2 <---------ALFIN1 ---------ZAT18   <---------HSFB2a(2)    --------->ANAC46   <---------REM1(2) -->ANAC46        --------->HSFB2a(2) <---------REM1(2) ------>ZmHOX2a(2)   agtgagcttatcatcttcttctggcagccacggtcctttcttcacgcctttgtcttgatcgcaacacggtgatcttcccattttgtttatatcaagaacc  9883400                                      ---------->ID1                                    <---------ANAC58                                    <---------ANAC58                                 <---------MYB52(1)                            ------>ZmHOX2a(2)                                                <-------                          <---------ARR11(3)                                                ---------                          --------->ARR11(3)                                                ---------                      --------->CCA1(2)               <------MYB46(1)                  <---------ICU4                     --------->ARR11(3)               <------MYB83                     --------->YAB1                     --------->ARR11(1)              --------->MYB59            --------->DAG2      <                     <---------ARR14(2)         <---------YAB1    <-----------TBP    <---------RAP2.6(3)                     --------->ARR14(2)      *TSS    <---------TOE2(3)    ----------->GT1   <--------     <---------YAB1  <---------ARR11(3) <---------DEAR3(2)       ------->TEIL  ---------->DOF2     --   aaaacttatcagaggtttttgaagatatgatcttcgtttcgtcgctccctacgattaggtttgtatgtatatatagatgtgaaaagcagtcatgacataa  9883500                                          <---------AHL20(2)                                          <---------YAB1                                        <---------ICU4                                     --------->WOX13(1)     --------->DAG2                    --------->ICU4                                     --------->AHL20(2)    ---------->DOF2               ----------->GT1      <---------ANAC58                   ---------->DOF2 --MYB59                          <---------ANAC46     <---------ANAC58                   <---------AHL20(2) >TGA2(1)  <---------ANAC46     <---------ANAC46  --------->YAB1                         <---------ATHB12 >bZIP60(1)<---------ANAC58     <------MYB46(1)  <---------YAB1                    --------->WOX13(1) ---------TOE2(3)               <------MYB83<---------AHL20(2)             --------->CCA1(2) -bZIP60(1)<---------ANAC58 --------->GLK1(2)<---------YAB1               --------->AHL20(1)      --- -------->DOF2             <---------GLK1(2)<---------AHL20(1)            <---------ARR11(3)   ------   ctaaagtaaagttgtgtatgcattcgtcagaatttggtgtaaatattatttttcatagtgtgtcataagtctacaatatatgagtcattcaataaatcag  9883600                                        --------->YAB1                                       ----------->GT1                                       <---------ZAT6                                  <------MYB83                                  <------MYB46(1)              <---------SPL7                                 <---------------AtSPL8       <---------ANAC46                                 --------->MYB111(1)          <---------ANAC58        <---------LBD16               --------->YAB1    --------->MYB59              <---------ANAC58       <---------ANAC46      --------->TOE2(3)          <---------------AtSPL3  <---------bZIP60(2)         <---------ANAC58     ----------------->AG   --------->ICU4        --------->CCA1(2)                  <---------ANAC58 ------>AHL20(2)  <-----------GT1--------->MYB46(2)    <-----------HVH21      ----------->GT1 ----->GT1  ----------->GT1 <---------YAB1     <---------YAB1<-----------------------TaNAC69(2)   ttaaataaccaaaatagttataacaaaatcaagattaggtactgataatatgatatgtgtcatggcgttcgaacttcgaagagtaattcgtggggatgat  9883700                     ---------->DOF2                   <---------AHL20(2)               --------->AHL20(2)             --------->AHL20(2)            <---------ICU4             <---------YAB1           --------->ICU4         --------->ATHB51                      --------->MYB52(2)         --------->AHL20(2)       --------->YAB1                     <-------GAMYB <---------AHL20(1)        <---------AHL20(2)        <--------ATHB1                     <---------ANAC46        --------->AHL20(2)        <---------ICU4                  <---------ANAC46 --------->AHL20(1)        <---------ATHB51         --------->ICU4                 <-----------RAV1(1)<---------AHL20(2)        <---------ATHB12         <---------ATHB51           <---------YAB1      --------->AHL20(2) <-   gttcaaacaaataatttttatataaaagaatacgaataattgttaatgcattaatggattttgttattgtgggttagatgtataaaatatttgccctagc  9883800                                                            <-----------GT1                                                          <---------ANAC58                                                          <---------ANAC58           --------->YAB1                                                      <<<<<<<<<SARD1      ----------->GT1                                                      <<<<<<<<<CBP60g   <---------ANAC58        <----        --------->AHL20(2)       --------->ARR11(3)  ------>MYB46(1)    <---------ANAC46    <--------        <---------AHL20(2)       <---------ARR11(3)  ------>MYB83       <---------ANAC58    --------- --------YAB1        <-----------GT1<----------DOF2<---------MYB59 <----------DOF2--------->WOX13(1)   tatgttagaataaaatgttgatatttccctactaaaatcttttttttttgggaccaaatttcttacgctcttttacttgtaaaacaatcacaaattatat  9883900  Previous    Next  AGI:  At4g17785.1    Description:  MYB39 (MYB DOMAIN PROTEIN 39); DNA binding / transcription factor. Identical to Transcription factor MYB39 (MYB39) [Arabidopsis Thaliana] (GB:Q8GWP0;GB:O23618;GB:Q9SPG8); similar to MYB107 (myb domain protein 107), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G02940.1); similar to myb family transcription factor [Brassica oleracea] (GB:ABD65628.1); contains InterPro domain Myb transcription factor (InterPro:IPR015495); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contai Range:  from: 9881648    to: 9883445    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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