Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             --------->YAB1                                                                                        <---------ICU4                                                                                        --------->YAB1                                                                                       --------->ICU4                                                                                       <---------YAB1                                                                                     --------->YAB1          ---------->DOF2                                        ---------->DOF2    <---------YAB1        <---------YAB1                                     --------->LBD16    <---------ARR11(3)     --------->AHL20(2)                   <---------AHL20(1)  --------->At5g28300   --------->ICU4     <---------AHL20(2)        --------->YAB1              ------>NtERF2      --------->ARR11(3)   <----------DOF2            <---------YAB1             <---------LBD16   <---------TOE2(3)     <--- -----AHL20(2)       <---------AHL20(2)   <---------ARR11(3)<------NtERF2 ---------->DOF2 <---------YAB1   aatttcttttattaaagacatattttatagttatgataaaacaatatatgttgaaatttgccgcagtaaaagaagttaaagatactatgattatgataac  9859800                                     --------->ANAC55(2)                                     --------->ANAC58                                     ----------->GT1                                     --------->ANAC58                               --------->AtLEC2                                     <---------ANAC46                            <---------WRKY45                                     <---------ANAC55(2)                         <---------WRKY38(1)                                <---------------AtSPL8                           <---------WRKY12                     ----------->RAV1(1)               <-----------GT1          --------->WRKY18(1)     <<<<<<<<<<<<<<<<<LFY  --------->YAB1          --------->AHL20(2) <----------DOF2 <---------YAB1     <---------ETT(1)<-------TEIL --------->TOE2(3)   <---------ANAC58           <---- -------DOF2       <---------------------WRI1   --------->YAB1       <---------ANAC58    --------->ATHB12   tttgttattacattggaggtttgcgacaataacaatggtacgtaaaacaaacataaattacttcgcctattgctttgcaatggtcaatgcaagattgaac  9859900                                         ------->TEIL         ----------->HVH21              <---------CCA1(2)         --------->WRKY38(1)      --------->ANAC58        ----------->HVH21       <---------ARR11(3)        <-----------HVH21         --------->ANAC58  --------->ANAC58        <---------ALFIN1      <---------DEAR3(1)         <---------LBD16    --------->ANAC58   --------->At4g35610 -----ICU4       <---------ZAT6<---------SPL7  --------->YAB1          <---------At4g35610   attacacctcggtgacctcgtgttaagcgatatcgcacggatgtatctttcatcaaggcattgacacttgttctgctcacacttgatattcttcgttgca  9860000                                                                                             <-------                                                                                           --------->YAB1                                                                                <---------ICU4                                                                                --------->YAB1      <                                                  <---------ANAC58           --------->YAB1<---------ICU4                                                  <---------ANAC58      <---------AHL20(2)<---------YAB1                         <-----------RAV1(1) --------->GLK1(2)       --------->AHL20(1)   --------->ICU4                --------->YAB1    <---------GLK1(2)              <---------AHL20(2)     --------->YAB1   <---------TOE2(3)    <---------YAB1      <---------GLK1(2)   --------->AHL20(2)<---------YAB1   --   cattttagattagtacaatcagagtcattgttgcaagattgtgccagaatttgtgtgcctatgagattaaatatgttattgatcatgaattcatgatgat  9860100                                                                   ------->TEIL                                                                   <-------TEIL                                                                <---------ANAC58                                                                <---------ANAC55(1)                                                                <---------ANAC58                                                                <---------ANAC55(2)                                                                <---------ANAC46                                                                --------->ANAC55(2)                                                           <---------ICU4                                                          --------->AHL20(1)                                     ------->TEIL         --------->AHL20(2) --YAB1      <------ZmHOX2a(1)       <-----------GT1     --------->AHL20(2)    --------->DAG2 ---------AHL20(2)               ------->TEIL--------->AHL20(1)--------------->AtSPL3     ----------- ------->AHL20(2)>>>>>>>>>TBF1<---------YAB1--------->YAB1<---------AHL20(2)  ---------->DOF2      <-   atataatatagatgaggaagaagaagatggcgatgaatgtaactaaacatattatccaaaaaaattacgtacatgttgagaaaagtagaagaccgataaa  9860200                                                                                                   <-                      <------------CBF                                                           ----    <---------At4g35610                                          <---------ANAC58              <-----    <---------ZAT2  <---------AHL20(2)                           <---------ANAC58          ---------- ---------->DOF2    <---------YAB1      <----------DOF2      <---------ANAC46      <---------ARR14(2) >GT1    <----------DOF2            <---------CCA1(2)        <---------ANAC58      --------->ARR14(2) --------YAB1      --------->AHL20(2)------->TEIL            <---------ANAC58     <------ZmHOX2a(1)<-   tatcaaagctgctttctccatttttattgaataagtttgtatctttctcttgtgttttgagttgtttgtgtgactaaaactggaggatttggagagtatt  9860300                          <------------CBF                            --------->ANAC55(2)                       ------------>CBF                               <---------ANAC55(2)                      --------->ANAC58                                <---------ANAC58                   <---------ZAT2                                     <---------ANAC58         ----------------------->TaNAC69(2)                      --------->ANAC46                  --     <------MYB46(1)  --------->ANAC58                           <---------ANAC55(2)             <---     <------MYB83  --------->ZAT2                                --------->ANAC55(2)          <------ --------AHL20(2) --------->ANAC46                               --------->ANAC55(1)      --------->AHL20(2) ----->YAB1       --------->ANAC58                              <-------TEIL            --------->ARR11(3) ------TBP        --------->ANAC58                <---------TOE1(3)  --------->MYB52(2) <---------ARR11(3) ->GT1 <<<<<<<<<MYB2  --------->ANAC46            <---------TOE2(3)<---------MYB52(1) <---------TOE2(3) --------YAB1   --------->LBD16          <-----------GT1 ----------->GT1       --------->ANAC55(2) --   tataatttggttttcttccccagcaagcaattgttttgctaatttactggttaatgttttggtaaatacgttacttacttcatgtaataagattttatac  9860400                                                                             ---------->ID1                                                                         <---------YAB1 <------NtERF2                                                          <------------CBF  <-----------GT1                                                        <---------AHL20(2) <<<<<<<<<<GT-3b                                                 <---------TOE2(3)      <---------AHL20(1) ---->MYB83              <-----------GT1      <---------ATHB12         <---------ICU4  ------>NtERF2 ------MYB59          <---------ICU4       <---------------AGL15      <---------YAB1  <---------ATERF1(2) -----GT1      ----------->GT1             --------------->AGL15   <-------TEIL<----------DOF2 ---->MYB46(1)--------->ATHB12      <---------TOE2(3)----------->GT1  --------->ICU4  --------->ATERF1(2)   caaatttgtttcagaatgagtgaaaaattacctagtttgatgtttctaatcaaggtagtaaattggaaattcattatttttctttttgccagcgataaca  9860500                                    <---------AHL20(2)                                   --------->AHL20(2)                                              <-             <-----------GT1    --------->AHL20(2)                                                ---             <---------AHL20(2) <---------AHL20(2)                                       --------->At5g28300   ------>ZmHOX2a(2)       --------->ZAT18                                         --------->ARR11(3) <---------ARR11(3)        <---------ZAT18     <---------MYB52(1)                  --------->GLK1(2) --------->ARR11(3)        <---------ZAT14  <-------TEIL      <---------MYB52(1)   <---------ARR11(3)   tttgatcttctatatttacattttgagagtgcatttatttaatcgattcgttactcaaatattcgttactcaaatagttaccaaaaatctcggtaaacaa  9860600                      -------->ATHB1              <---------ICU4             <---------YAB1             --------->ICU4          <---------YAB1      <---------ARR11(3)         <---------ARR11(3)      <---------AHL20(1)         --------->ARR11(3)   --------->TOE2(3)                           <xx      --------->AHL20(1)   <---------TOE2(3)   --------->At5g28300   --------->DAG2          --------      --------->ARR11(3)  >>>>>>>>>WRKY18     ----------->GT1       ---------->DOF2          <-------     --------->CCA1(1)--------->ATHB12      <---------ZAT14     --------->AHL20(2)          <--------     --------->RVE1(1)<---------ICU4        <-------TEIL        <---------AHL20(2)          ---------   --------->YAB1    <---------ATHB12       --------->ZAT18    <---------AHL20(2)       <---------AHL20(2)  <---------YAB1  <---------AHL20(2)        --------->ZAT14 --------->AHL20(2)          --------->AHL20(1) --------AHL20(2)--------->AHL20(2)     <---------------AtSPL8 --------->AHL20(2)       --------->AHL20(2) ------>AHL20(2) <---------AHL20(2) <----------DOF2 xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)--------->AHL20(2)   ttttataatatcttgataattaaatcattgacgaagaactttgaagtacagtaaaacctctataaattaataaagttgggactacaaaattttattaatt  9860700  Previous    Next  AGI:  At4g17713.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G17718.1); similar to hypothetical protein 40.t00037 [Brassica oleracea] (GB:ABD65155.1); contains domain PROKAR_LIPOPROTEIN (PS51257) Range:  from: 9859808    to: 9860221    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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