Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                                                                    -                                                       <---------AHL20(2)                          --                                                      --------->AHL20(2)                           --                                                      <---------AHL20(1)                       ------                                                      <---------AHL20(2)                       <-----                                                  <---------YAB1                               ------      ----------->GT1         <---------ICU4  --------->TOE2(3)                                <-----     <----------ID1        --------->YAB1 --------->YAB1                             <----------ID1<-  ---------->DOF2        <-----------GT1 <---------ATHB12                         ---------->DOF2<---   caataaaagggcaaaatttcatattttaaacatcatttcataaatcatcgttataatttttttgacataataaacttgtaaactaaaagggcaagaagac  9858900          <---------MYB46(3)                                  <------ZmHOX2a(1)        <---------MYB52(1)                                 <------NtERF2 -------->ANAC58                                           <-----------RAV1(2) -------->ANAC58                                          <------NtERF2 ----->TEIL                                               ------>NtERF2                   <---------ALFIN1 ------->SPL7                                             --------->LBD16                <---------ZAT14 --------->AtSPL8                                        --------->DEAR3(1)             >>>>>>>>>>>>> ----------AtSPL8                                       --------->RAP2.3(1)             <<<<<<<<<<<<< --------->AtSPL3                                 <<<<<<<<<TBF1                     --------->ARR14(2) ----------AtSPL3                        <---------DOF5.7(2) --------->ZAT2         --------->ZAT14 - ------TEIL      <---------At4g35610  --------->YAB1    <---------LBD16             <---------ARR14(2) ------SPL7     ------->TEIL         <---------TOE2(3)--------->ANAC46         <---------ZAT14  <----   gtacgcttccatttgttgaatctgactagcagtatgtctatggtaacgtttcttcttcgccgcaggaggctcttgttcgattgcagtattctccactggg  9859000                    --------->MYB52(1)               <---------WRKY18(1)              --------->WRKY12              --------->WRKY38(1)            <-------GAMYB       --------->ARR14(2)                                                                       <----       <---------ARR14(2)                                                                       -----     ----------->HVH21                ------>ZmHOX2a(2)                                        <-----     <---------ETT(1)    <---------ARR14(2)                                                  <-------    --------->DEAR3(2) ----------->HVH21                                                    ---------    --------->MYB46(3)--------->MYB46(3)                                                    <-------- >>>>LFY   --------->LBD16          --------->ARR11(3)                                ----------->GT1 <<<<LFY <---------LBD16 --------->ARR14(2)                   <----------DOF2        --------->DAG2 ---------->HVH21   -------->P <----------DOF2 <---------ALFIN1         ----------->RAV1(1)<---------YAB1 -------HVH21<--------P--------->ANAC46       XXXXXXXXXXXXXXXXXXXXX>MIR831          ---------->DOF2   tcatgacccgacccggttgacttacccgacccgctttcgatcttgctcatcacctcatactcttctttctaaacccacaaaaacaataaagttattaatt  9859100                                                                                           --------->AHL20(2)                                                                                         ----------->GT1     >>>>>>>>>>GT-3b                                                                    --------->DAG2  <---------TOE2(3)                                                                 ----------->GT1 -----AHL20(2)          <---------TOE1(3)                    ----------->GT1      <------ZmHOX2a(1) ---->AHL20(2)          <---------TOE2(3)        --------->LBD16            --------->HSFB2a(2) ----------AGL15  --------->DAG2                 ----------->GT1            <---------HSFB2a(2)  <--- --AHL20(2)      ---------->DOF2                ----------->GT1             --------->HSFC1(1)   <--- >AHL20(2) <---------ANAC55(2)                 <---------LBD16              <---------HSFC1(1)------- -AHL20(2) ----------->GT1                    --------->MYB52(1)      <---------TOE2(3)---------->DOF2   ttttaagaaaaatatgtaaaaaagttagggtttttggagacgaagacaaaccggaaaaatgtaagggaaattagggttctcgaaggaggtaaagtaatta  9859200                                  --------->MYB52(1)                                --------->DEAR3(1)                              <---------ANAC58                               --------->ANAC58                        ------>ZmHOX2a(1)                               --------->ANAC46                        <----------DOF2   <---------ANAC58                   <------NtERF2<---------MYB52(2)                     <---------DAG2    <---------ANAC58 ------TOE2(3)   --------->ETT(1) ------>MYB46(1)          <-----------GT1      <---------ANAC58 ------TOE1(3)   <---------ANAC46 ------>MYB83         --------->AHL20(2)    <----------DOF2        - -->ICU4<---------MYB46(3)     --------->ANAC58  --------->ETT(1)   ---------->ID1    <----------DOF2   gggttttggattgttgttgtcggagacgaagacaccgaaccgaaaacgttgtcggaatttaaaaccatatgtcctttttctttcttgtctttcgtttcca  9859300                                                                         --------->TOE2(3)                                              <---------ZAT14            <---------MYB59                                              --------->ZAT14            <---------DAG2             -                                             <----------DOF2             --------->TOE1(3)          -                                          <-----------GT1             <-----------GT1         <------                                    --------->MYB52(2)              <----------DOF2        <---------ANAC58          ---------->DOF2          <-------TEIL                     <---------DAG2         <---------ANAC58 -------->AHL20(2)          ---------->DOF2  <---------DAG2      <-----------GT1  ---------->ID1 ----   ttttaaatcagacaaagagaagactgagtttaaagggttcgttttcactttactctcaaaattctttttactttaccttaccttgttgttttggcttcgg  9859400                                                                              <------NtERF2                                                                             <---------SPL7                                                      <---------LBD16        ------>NtERF2                                              --------->YAB1                 <-----------HVH21      <                       --------->ANAC58  ----------------->AGL3<------ZmHOX2a(1)                    <                       --------->ANAC58 --------->ANAC58    <-----------RAV1(2)--------->SPL7      <-         ----------->GT1       <---------ARR11(3)    <---------At5g28300    --------->DEAR3(1)     <- -------->ANAC58   ----------->GT1      --------->ANAC58  ------>NtERF2     <---------ANAC58       -- -------->ANAC58  --------->DAG2--------->CCA1(2)    --------->MYB52(1)     <---------ANAC58  ------- ---ANAC46----------->GT1---------->DOF2--------->ANAC46--------->LBD16  --------->ANAC46   <-------- ----->ARR14(2) ---------->DOF2--------->ARR11(3)   <-----------GT1<---------ZAT6          --------->MYB52(1)   ataagctagagaagataaaaaaggtaagaaagagatatatgcactcaaaaatagttaccgggccaggaagtgtaaacggcgtccgtccatgtttaacggc  9859500                                                                                   <-----------ARR10    <-----------GT1                                                                <---------ARR11(1)    --------->MYB52(1)                                                             --------->ARR11(3) ---------ICU4                                                                    <---------CCA1(2) --------HAHB4                        <---------ALFIN1                          --------->YAB1 --------YAB1                <---------ANAC58            ------>ZmHOX2a(1) ------------>CBF --------ATHB51              <---------ANAC58 <----------DOF2     --------->At4g35610 ------->ICU4             --------->DAG2      <---------DAG2      <---------At4g35610<---------ICU4-- >GAMYB------->GAMYB     ---------->DOF2--------->ANAC46 --------->HSFB2a(2)   <---------ATHB12   <-- -At5g28300 --------->MYB52(1)      ----------->RAV1(1)  <---------HSFB2a(2) --------->WOX13(1)<-----   gataattaacggactaacagatggacaaaaagcttgtccaacactctactttttttttcctcgaaggaagcagagagtccaatcaaatctttgctcagta  9859600                                                                     --------->ARR11(3)                                                                     <---------AHL20(2)         <----                                                                     --------->AHL20(1) --------->ATHB51                                                                     <---------AHL20(1)<---------YAB1                                                                   <---------TOE2(3)<---------AHL20(2)                                                                 --------->AHL20(2) --------->AHL20(2)                                                                 <---------AHL20(2) <---------YAB1                                                                <---------YAB1   --------->AHL20(1)                                      --------->WOX13(1)        --------->ICU4   --------->ARR11(3)                                  --------->ANAC58            <---------ICU4     <---------AHL20(1)                                  --------->ANAC46           <---------AHL20(2)  --------->AHL20(2)                          --------->YAB1<---------ATHB12     --------->ICU4      <---------ARR11(3) ---------->CBF     ----------->RAV1(1)--------->GLK1(2)     <---------ATHB51   --------->CCA1(2) ---------GT1      --------->ZAT18--------->ANAC58           --------->AHL20(2)--------->ARR11(3) ----ICU4     ---------->DOF2   ---------->DOF2        ----------->GT1         <---------ARR11(3)   ttacaatcttggacccaaaagcccacaataacaaaaacgccaatctatacttgtaactcgtaaataattaatattttgtaagatatattattattgtttt  9859700                                                                                           --------->YAB1                                                                                        --------->YAB1                                                                                        <---------ICU4                                                                                       <---------YAB1                                                                                       --------->ICU4                                                                                     --------->YAB1          ---------->DOF2                                        ---------->DOF2    <---------YAB1        <---------YAB1                                     ------>NtERF2      --------->ARR11(3)     <---------AHL20(2)                   <---------ARR11(3)  --------->At5g28300   --------->ICU4     --------->AHL20(2)        --------->YAB1              --------->LBD16    <---------ARR11(3)   <----------DOF2            <---------YAB1             <---------LBD16   <---------TOE2(3)     <--- -----AHL20(2)       <---------AHL20(2)   <---------AHL20(1)<------NtERF2 ---------->DOF2 <---------YAB1   aatttcttttattaaagacatattttatagttatgataaaacaatatatgttgaaatttgccgcagtaaaagaagttaaagatactatgattatgataac  9859800  Previous    Next  AGI:  At4g17710.1    Description:  homeobox-leucine zipper family protein / lipid-binding START domain-containing protein. similar to HB-7 (homeobox-7), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G46880.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN60291.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Lipid-binding START (InterPro:IPR002913); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Homeobox; (InterPro:IPR001356) Range:  from: 9856309    to: 9859301    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version