Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   ----                                                                                            ---------                                                                                       <---------MYB59      --------->TOE2(3)                                                          --------->AtMYB61    --------->GLK1(2)                                                     --------->ANAC58  <--------   <---------GLK1(2)     --------->YAB1          --------->WRKY38(1)      --------->ANAC58 <---------ATHB12 --------->ANAC46--------->ANAC46          <----------DOF2         <----------DOF2     --------->TOE2(3) --ARR11(3)      --------->ANAC58<---------TOE1(3)                 --------------->AGL15 ------>MYB83 ->ARR11(3)      --------->ANAC58<---------TOE2(3)                 <---------------AGL15 ------>MYB46(1)   tacacgattcttaatccacaaggcaaatcagaattagggtttcttcttttgttgactaaaatatcaaaactttattaagcaaaccaaaacctaatcgtta  9834300                                                                        ---------->DOF2                                                                  <---------HSFB2a(2)                                                                  <---------HSFC1(1)                                                                  --------->HSFC1(1)                                                                 ------>ZmHOX2a(2)                                                                --------->CCA1(2)                                                                <------ZmHOX2a(2)                                                               <---------AGP1<---------------AtSPL8                                                               --------->ARR14(2)                                                               --------->ARR11(3)                              --------->YAB1                   <---------ARR14(2)                <---------ANAC58                               --------->AGP1--------------->AtSPL8    --------->YAB1           <---------ATHB12                  <---------ARR11(3) ----->ZAT6     <---------ANAC58                       --------->AHL20(2)    --------------->AtSPL3 >YAB1         --------->At4g35610                   ----------->GT1 <<<<<<<ZML2 ------->TEIL  <----- -ICU4         <---------At4g35610--------->GLK1(2)---------->DOF2--------->HSFB2a(2)          ------   cagtaatcaaatttcttagcttacatagcaaatgataatctgggtatgtttcaaaaagaaaataagatctagaacaaaggaagtacctgtacatgaagat  9834400                                                                  --------->At5g28300                                --------->ANAC58                 --------->TOE2(3)          <--------                                --------->ANAC58                 ------->GAMYB              ---------                              <------ZmHOX2a(1)                  --------->ANAC46         --------->ARR11(3)                     <---------ANAC46          --------->CCA1(2) --------->TOE1(3) ------->TEIL                     <---------ANAC58       --------->ANAC58  <---------ARR14(2)   --------->GLK1(2) ----ARR11(3)        <---------ANAC58       --------->ANAC58  --------->ARR14(2)   <---------ARR11(1) --->ARR11(3)       --------->MYB52(2)      --------->ANAC46  --------->MYB52(1)  <---------ARR14(1)   gtctctgttatcaccaagacgtttcttgcagaggaagcaagagtccaagaaatgaggctgtccataaccgtaatagctattgtcgaatctaaaatcatga  9834500               --------->At4g35610               <---------At4g35610          --------->HSFB2a(2)          <---------HSFB2a(2)         ------>ZmHOX2a(2)        --------->CCA1(2)        <------ZmHOX2a(2)       <---------AGP1       <---------ARR14(3)       --------->ARR14(3)       <---------ARR11(3)       --------->ARR14(2)       --------->AGP1                      ----------->GT1       <---------ARR14(2)              --------->ICU4    <---------HSFB2a(2)                <---------YAB1    --------->HSFB2a(2)              --------->YAB1    --------------->AGL15           <---------YAB1  --------->YAB1    <---------------AGL15           --------->ICU4  <---------ICU4   ----------------->AGL2         --------->YAB1   <---------YAB1   <-----------------AGL1        --------->ICU4    --------->ICU4     <---------REM1(1)   ----------------->AGL1        <---------YAB1  --------->YAB1       ----------->GT1           -----   <-----------------AGL2      --------->YAB1   <---------YAB1     --------->MYB52(2)           ----- <-----------GT1              --------->ICU4<-------GAMYB        <---------ARR14(2)             <---- -ICU4 --------->ARR11(3) --------->ZAT14  <---------MYB46(3)   <------ZmHOX2a(1)               <---- >YAB1<---------CCA1(2)   <---------ZAT14 <---------YAB1      <---------TOE2(3)   <------ZmHOX2a(1)   aattttccagatctgggagatgaaacagagtactgatgatgatgatggttataataataactctgaggatagttgtaacaagaaggacttgaaactccag  9834600                                                                                           <---------        --------->At4g35610                                                        ------->TEIL ---->ZAT2                                                                   <-----------GT1 ---->At4g35610        --------->MYB46(3)                       --------->ARR14(2)<---------CCA1(2) -----At4g35610<----------ID1                        <----------DOF2      <---------AHL20(2)       -- -----ZAT2 ---------->DOF2         <<<<<<<<<TBF1 <---------TOE2(3) --------->TOE2(3)     ---------->ID1   cttccatctcagataaagaaacaaaaccatcgtcttcttcttctatgaaataaggctttctcatcgaaacctccatttttttctgaatcttgtctttttt  9834700                                          ----------->ARR10                                         <------ZmHOX2a(1)                                        *TSS--------->ARR14(2)                                       <---------ANAC46                                    <---------AtMYB61                                    --------->ALFIN1                                  <---------ANAC46                                <------MYB46(1)                                <---------ANAC58                                <---------ANAC46                                <---------ANAC58                            <------ZmHOX2a(1)                                <------MYB83<---------ARR14(2)        <---------YAB1                               --------->MYB46(2)                    <-----------TBP  <---------YAB1               <---------MYB46(3)                <------MYB46(1) -DOF2                         <---------AtMYB61                 <------MYB83 -------->ID1                  --------->MYB111(1)              --------->MYB59        <------ZmHOX2a(1)   tgttcttatttggacagagatagagagagaggtttggtgtggaggagatttgtgagaagatggagtttggtttttataggaatagagaaggacaggtttg  9834800                                                                                      <---------MYB111(2)                                                                                      --------->AtMYB61                                                                                      <---------MYB111(1)                                                                                  <---------MYB46(2)                                                                                  <---------MYB111(2)                                                                                <-----------GT1                                                                             --------->YAB1<---------ICU4                                                                          --------->AHL20(2)                                                                          <---------AHL20(2)                                                                          <---------AHL20(1)                                                                          --------->YAB1  --------->MYB46(3)                                                       ------>ZmHOX2a(1)  <---------ICU4--------->MYB52(1)                         <---------ANAC58             --------->TOE2(3)   <--------ATHB1------>MYB83                         <---------ANAC58      <---------DAG2            --------->ICU4 ------>MYB46(1)                    <------------CBF           <----------DOF2      --------->TOE2(3) <---------MYB59                --------->GLK1(2)    ------------>CBF --------->TOE1(3)--------->YAB1 <---------MYB52(2)               <---------GLK1(2)    <-----------GT1<-----------GT1  <----------DOF2   <---------MYB46(2)   attctggttaagagagagaatctattggcttcttgtttttgcaataccgcttttttccttaatcgaatttctttaataattttaactacctaaccattac  9834900            --------->ATHB51            <---------ICU4            <--------ATHB1                                  --------->ANAC55(2)            --------->ATHB12                                <---------ANAC55(2)           <---------ATHB51        <-----------GT1        <-----------GT1          <---------ZAT6           --------->ICU4     --------->AHL20(2)          --------->AHL20(2)  --------->YAB1        <------ZmHOX2a(1)     <---------AHL20(2)   ------->TEIL          <---------ANAC46 <---------YAB1               <---------YAB1    <---------YAB1<---------ICU4 <---------YAB1  <-------   attatgaagaggaataattgagccactagtatataattaagcattttcttatgaatcaaattacttatttcacttgtgtataatagtgtaaggctctttt  9835000                         <---------ARR11(3)                         --------->ARR11(3)                                                       <--                        --------->CCA1(1)                                                         ---                        --------->RVE1(1)                                      --------->AHL20(2)<---      --------->ZAT6--------->AHL20(2)        --------->AtLEC2                 <---------AHL20(2)---- ---DOF2      ----------->GT1     <---------ANAC46               --------->ATHB12         >>>>>>>>>>GT-3b   ctatagaaacactatgtagaaaaaaaatatctagtgacttaaacagcaatgcaaaactgaaccaaaacgattgaatcaaattttaatctaagaaaaatag  9835100            --------->TOE2(3)            <---------MYB59           <---------ANAC55(2)  --------->ANAC58  --------->ANAC46  <----------ID1  --------->ANAC58 -------GLK1(1) ------>CCA1(2)            --------->ORA47(1)                                                    <--- ------ARR11(3)        <-----------GT1                              --------->YAB1        <---------- ----->ARR11(3)    --------->AHL20(2)---------->DOF2               <---------YAB1     --------->AHL20(2)   atatacgaaaaatacctaaaatttaaaaccggccaaaaaaaaagacaatgactagaaacaaacttgattttcataagaaagtttcagttaaattacattg  9835200  Previous    Next  AGI:  At4g17670.1    Description:  senescence-associated protein-related. similar to senescence-associated protein-related [Arabidopsis thaliana] (TAIR:AT5G47060.1); similar to hypothetical protein 40.t00027 [Brassica oleracea] (GB:ABD65149.1); contains InterPro domain Protein of unknown function DUF581 (InterPro:IPR007650) Range:  from: 9833674    to: 9834740    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version