Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                         --------->bZIP60(2)                                                                                       --------->REM1(1)                                                                                     <---------ALFIN1    --------->ANAC58                                                                 ----------->RAV1(1)    --------->ANAC46                                                              --------->ANAC58    --------->ANAC58                                                              --------->ANAC58    --------->TGA1a                                                            --------->ARR14(2)    --------->O2                   --------->ANAC58                            <---------ARR14(2) --------->LBD16                   --------->ANAC58          ------>ZmHOX2a(1)<---------MYB52(2) ----ICU4                      <-----------HVH21      <-------TEIL           --------->ANAC58 --->YAB1              <------ZmHOX2a(2)         ----------->RAV1(1)         --------->ANAC58 -------ATHB5         --------->AGP1   XXXXXXXXXXXXXXXXXXXX>MIR827       --------->ANAC58 -->ATHB1             <---------ARR14(2)      --------->ANAC58           --------->ANAC46 ---ATHB12            --------->ARR14(2)      --------->ANAC46           --------->ANAC58  --------->WOX13(1) >WOX13(1)           --------->At4g35610      --------->ANAC58    ----------->GT1 --------->ANAC46   ttccccaagtcagaaacaatctcagatccaaactatcacccaaatgaccagcaacatacattcctatagagtaacaagcaagaaacgccacatcaatctc  9779400          <-----------HVH21         --------->ANAC46         ====================bZIP_DOF         <---------TGA1a         ====================bZIP_DOF         --------->TGA1a                  <----------DOF2  =================MYC_MYB                ------>ZmHOX2a(1)  ------>MYB46(1)                <---------ARR14(2)  ------>MYB83              <-----------GT1                       --------->TOE2(3)   <-----------GT1  -------->P      <----------DOF2--------->ARR14(2)       ----------->RAV1(1)<-----------GT1   tcccaacctagacgtcccatctttcccattaaacggttcccatcctttagacttacgatgcaacaaaacctcatctatatcaccaatttctctcttcaca  9779500                                                                                                   <-                                                                                                   <-                                                            <---------ANAC58                    <----                                                     <---------ANAC58                           <----   --------->DOF5.7(2)                               <---------ANAC58                           <---- --------->ANAC58                                    <---------ANAC46                       <-------- --------->ANAC46                                   <------NtERF2                          <--------- --------->ANAC58  --------->YAB1   <---------MYB52(1)      <---------ANAC58         --------->ZAT14 --------->ANAC55(1)              <----------DOF2 --------->ALFIN1                   <---------ZAT14 <---------ANAC55(2)          ---------->ID1    <---------bZIP60(2)     ----------->GT1   --------->ZAT14 --------->ANAC55(2)        <-----------RAV1(1)<---------AtMYB61      <---------ANAC46    <---------ZAT14   aacacgttacccataggccaaggataaattttgtcgctgttatgttcttgaggtggcttagtgcttgagtctgggtgtaaaacgctcttcactatgctgc  9779600                                     ----------->GT1      --------->HSFB2a(2)  ------->MYC3                        --------->HSFC1(2)      <---------HSFB2a(2)  <-------MYC3                  --------->MYB52(1) -----MYB83                <-------MYC2                  --------->SPL7 -----MYB46(1)             ------->MYC2                <---------SPL7                     ----------- -----ANAC46              <----------TaMYB80          <---------ANAC58                  <---------At4g35610 -----ANAC58            --------->YAB1                <---------ANAC58                  --------->At4g35610 -----ANAC58          --------->ANAC58                <---------ANAC55(2)               ----------->RAV1(2) -At4g35610           --------->ANAC58                --------->ANAC55(2)               ------>ZmHOX2a(1) --RAV1(1)     ----------->GT1     ---------->DOF2   <---------------AtSPL3      <---------ARR11(3)--   ttggtttacgagaagcatggtaacaagcatatgcgatgaaagtaataaacaaaatcgcgtaccgaaacgtctttggactccaatttcttcctctgactct  9779700                     <---------ANAC46                  <---------AtMYB61                --------->ZAT2               <---------TOE1(2)              <-----------RAV1(2)       <---------ZAT18      --------->ANAC58                                                     <---------ICU4      --------->ANAC58                                                     --------->YAB1  ---------->DOF2 --------->ALFIN1                                        <---------ATHB12         -- >HVH21--------->ZAT18       ------>ZmHOX2a(1) <---------CCA1(2)      ------------>CBF             -- ---->ZmHOX2a(1)<---------ZAT2 --------------------->WRI1             <---------YAB1      ---------->DOF2   cctcagaagcgcaatcccaggtggtgttttcctcttcgaattcatcgccatctctcacaacaaaacaaaattttcaatgataacaaaaaaaaaaaagaat  9779800                                                                            <---------WOX13(1)      --------->ANAC55(2)                                                  <------------CBF      <---------ANAC55(2)                                                 --------->ATHB12      --------->ANAC46                                                   <---------AHL20(2)     <---------LBD16                                                     <---------YAB1  <----------DOF2                                                   --------->AHL20(2) --------->TOE2(3)               <---------MYB52(1)                 <---------AHL20(2) --------->TOE1(3)          <---------ARR14(2)                 --------->ANAC58 ----->TEIL      --------->AHL20(2)        <---------ZAT6      --------->ANAC58 ------>P <------ZmHOX2a(2) --------->ARR14(2)         --------->YAB1<---------AHL20(2)        <-----   caacctttacggatcaaaatgaaatacccaaatccatttgttttagtgtttgataaatcagaatcacgaattaatttgattgagagagagcgattagaga  9779900                                                                                     -------->ABF1                                                                                     <-------MYC3                                                                                     <-------MYC4                                                                                     ------->MYC3                                                                                     ------->MYC4                                                                                     ------->MYC2                                                                                     <-------MYC2                                                                                    <--------ABF1                                                                                    --------->O2                                                                                    --------->ANAC55(2)                                                                                    =================                                                                                    =================                                                                                    <---------ANAC55(2)                                                                                    <---------O2                                                                                    --------->TGA1a                                                                                    <---------TGA1a                                                                                    =================                                                                                  <---------ALFIN1                                                                                <-----------HVH21                                                                                <-----------------PIF3(1)                                                                                ----------->RAV1(1)                           <------NtERF2                                       ----------->HVH21                          --------->LBD16                                      --------->ANAC58                    <------------CBF                                           --------->ANAC46                   --------->CCA1(2)                                    --------->REM1(2)                  --------->ARR11(3)                                    --------->ZAT14    ------>ZmHOX2a(1)                  <---------ARR11(3)                                   ----------------------->TaNAC69(2)       --------->MYB52(1)<---------ANAC46                   ----------->RAV1(1)--------->ANAC58      ---------->DOF2    <---------ANAC58                  --------->ANAC46  --------->ANAC58       <     --------->AtMYB61   <---------ANAC58                  --------->ANAC58  --------->ANAC46      <- ----------------WRI1   <---------LBD16                    --------->ANAC58  --------->ANAC58     <--   gaagagaccaaagggagagagatattggcgggagagagagagagacagagagagatagaacacgacataaactgtgaagacgcgacacgtgtcctatttg  9780000                                                                                              -------                                                                                              <------                                                                                              -------                                                                                              -------                                                                                              -------                                                                                              -------                                                                                   <---------O2                                                                                ------->GAMYB -------                                                                                --------->DREB2C(2)                                                                                ----------->HVH21                                                                                =============MYC_MYB                                                                                --------->DEAR3(1)                                                                               --------->MYB46(3)                                                                               --------->DEAR3(2)                                                                            ----------->HVH21<-------                                                                            --------->ANAC58 <-------                                                                            --------->ANAC46 --------                                                                            --------->ANAC58 <-------                                                                          <---------ALFIN1  <--------                                                                     --------->PCF2--------->O2                                                                    <-----------TCP11(1) <---------MYB46(3)                                                                    ------>NtERF2  <---------ANAC46                                                                    <---------ATERF1(1)  --------->MYB55(2)            ---------->DOF2                                        --------->DEAR3(1)   <---------DEAR3(1)           ---------->DOF2                      <----------DOF2    <---------DEAR3(1)   --------->ALFIN1    ---------->DOF2                      ----------->HVH21       --------->MYB52(1)--------->TGA1a ==============bZIP_DOF                 --------->At5g28300     ----------->HVH21  <---------bZIP60(2) =====================bZIP_DOF   --------->ANAC58      --------->ANAC58   --------->ANAC46 --------->ALFIN1 ======================bZIP_DOF  --------->AtLEC2      --------->ANAC58 <---------ALFIN1<---------AtMYB61 ---------TOE2(3)                --------->ANAC58   <---------SPL7--------->ATERF1(1)--------->ALFIN1 --------At5g28300    ----------->RAV1(1)--------->WRKY38(1)   --------->DEAR3(2)  <---------TGA1a ---------GT1--------->DAG2  <-----------HVH21  =============================================bZIP_DOF   ttacggtagagccaaaaggcagaacaacagttgtcatgccacggtgaccactttggtacgcatgaagcgacggcccacacgaccgacgtggtggtgggcc  9780100                                                                                              <------                                                                                            <-------- -->TCP20                                                                                   <-------- ---PCF2                                                                                   <---------AHL20(2) -->PCF5                                                                                   --------->YAB1 -->TCP16(1)                                                                               --------->AHL20(2) -->TCP15(1)         --------->YAB1                                                      --------->AHL20(2) -->TCP11(2)        <---------YAB1                                                       <---------AHL20(2) -->ZAT18         <---------ICU4                 <---------AHL20(2)                     --------->YAB1 --TCP16(2)       --------->YAB1               <----------DOF2         --------------->AtSPL8 <------ --TCP23         <---------ATHB12         ------>NtERF2              --------->YAB1  <---------AHL20(2) --->TCP11(1)    <---------YAB1          --------->DEAR3(1)  <---------YAB1          --------->AHL20(2) --TCP15(2)      --------->ICU4          <---------ZAT18    <---------AHL20(2)   --------------->AGL15 -MYB46(3)  --------->ANAC55(2)        --------->At4g35610  --------->AHL20(2)   ====================   caaattataggtttatgtaatcataataagactgtgtcattagccgactcttttattgatatttttataaatcatagtactatctatttatattaatatt  9780200                                                        <---------ANAC58                                               <-------PIF4        <---------------AGL15                                               ------->PIF4        --------------->AGL15                                               ------->MYC3 --------->ANAC55(2)                                               ------->MYC2 <---------ANAC55(2)                                               ------->PIF5 <---------ANAC46                                               <-------MYC4 --------->TGA1a                                               ------->MYC4 <---------TGA1a                                               <-------MYC3 <---------ANAC55(1)                                               <-------PIF5 <---------ANAC58                                               --------->TOE1(2)  <-----------------AGL1                                              ===============================================bZIP_DOF                                              ========================bZIP_bZIP                                              --------->TGA1a     <-----------------AG                                              <---------TGA1a --------->ALFIN1     --------->DAG2                    --------->MYB46(3)        <---------O2  =================================bZIP_DOF                  --------->YAB1              --------->O2  =================================bZIP_DOF             ------------>CBF     ----------->GT1       <---------ANAC58   <------ZmHOX2a(1)      ==================================================bZIP_DOF  ----------------->AGL1     ---------->DOF2<---------MYB52(2)       ------------>OsbHLH66----------------->AGL3 ------CBF  ----------->RAV1(1) ---------->DOF2<-------MYC2 <---------ANAC58      ---------->DOF2 -YAB1---------->DOF2 --------->MYB52(1)    <------------OsbHLH66 <-----------------AGL3 -TOE2(3)--------->PCF2         ========================bZIP_DOF  ----------------->AGL2    *TSS  <-- ---ICU4<-----------TCP11(1)    ========================bZIP_DOF  ----------------->AG   <---------ARR14(2) ==================================================================================MADS_MADS---------   gatatactaaaggcccacaataacaaacggcccataaagaaaattcacacgtgcgatggcatacgtgtgccaaaataggaagcgaaaagcagataaggct  9780300  Previous    Next  AGI:  At4g17550.1    Description:  transporter-related. similar to glycerol-3-phosphate transporter, putative / glycerol 3-phosphate permease, putative [Arabidopsis thaliana] (TAIR:AT3G47420.1); similar to transporter, putative [Brassica oleracea] (GB:ABD65069.1); similar to transporter, putative [Brassica oleracea] (GB:ABD65148.1); contains InterPro domain Major facilitator superfamily MFS-1 (InterPro:IPR011701); contains InterPro domain Major facilitator superfamily; (InterPro:IPR007114); contains InterPro domain MFS general substrate transporter (InterPro:IPR016196) Range:  from: 9777661    to: 9779751    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g17560.1    Description:  ribosomal protein L19 family protein. Identical to 50S ribosomal protein L19-1, chloroplast precursor [Arabidopsis Thaliana] (GB:Q8W463;GB:O23597); similar to ribosomal protein L19 family protein [Arabidopsis thaliana] (TAIR:AT5G47190.1); similar to plastid ribosomal protein L19, putative [Brassica oleracea] (GB:ABD65070.1); contains InterPro domain Ribosomal protein L19; (InterPro:IPR001857) Range:  from: 9780292    to: 9782196    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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