Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                           --------->AHL20(2)                                                      <---------ICU4                                         --------->AHL20(2)       --------->ATHB12                                         --------->YAB1  --------->ATHB51                                         <---------AHL20(2)  <---------AHL20(2)                                     --------->AHL20(2) <---------YAB1                        <------                                     <---------YAB1   -------->ATHB1                      --------->ICU4          <-----------HVH21          <---------AHL20(2) --------->ICU4                    <---------YAB1 ----->ANAC58                  ----------->GT1        --------->YAB1         <---------AHL20(2) ----->ANAC58                 <---------TOE1(3)       <--------HAHB4         --------->AHL20(2) ----->ANAC46                 <---------TOE2(3)      --------->ICU4   --------->MYB59   ------->TEIL   agacataacatgagtcacttcatatatatgtgaaggtatataattaaaacttagaatcattatttagttgattaggcatataatttgatgtacttattgt  9739300                   <---------ARR14(2)                   --------->ARR14(2)                                      --------->DAG2              <---------ICU4                                        --------->ANAC58             --------->ICU4                                         --------->ANAC58           --------->YAB1        <---------YAB1              <---------ARR14(2)    <---------AHL20(2)      --------->LBD16                  --------->ARR14(2)    --------->AHL20(2)    --------->ANAC46           ------>ZmHOX2a(1)    ---------->DOF2       ----- -----RAV1(1)<---------YAB1--------->DEAR3(1)  <----------DOF2    <---------AtLEC2   ----------->GT1   cgctaaataaatgtcataatggatttgcaccgcatattatagagtttctcttttcctagtccaaatttgcaagaaataaagtagagatggaaaatatgaa  9739400                                                     <---------HSFB2a(2)                                                     --------->HSFB2a(2)               <----------DOF2                    --------->ARR14(2)                           ------            <-----------GT1                       <---------ARR14(2)                          <------       <---------AHL20(2)                      <---------TOE1(3)            <------ZmHOX2a(1) -------      --------->AHL20(2)                       <---------TOE2(3)    ---------->DOF2         <-------- -->TEIL    <---------AHL20(2)             <----------DOF2---------->DOF2--------->CCA1(2) --------->AHL20(2)   tttgcattttaaatttactttggattccatacatatatagaagtactttgaggttatggaaaaagatagcaaaagataggacttactatacaatttacta  9739500                                                                                     <------------CBF                                                                                    --------->ATHB12                                                                                    <--------ATHB1                                                                                    -------->HAHB4                                                                                    --------->ATHB51                                                                                    <---------ICU4                                                                                   --------->ICU4                                                                                   <---------YAB1                                                                                   <---------ATHB51                                                                                 --------->YAB1                                                                                <---------YAB1     ---------->DOF2        ----------->GT1                                    --------->AHL20(2) ----------->GT1        --------->ARR11(3)                                    --------->CCA1(2) --------->AGL15        ------------------------>ANAC81                   <---------ANAC46 ---------AGL15       ------------------------>ANAC81<----------ID1      <---------LBD16 -------->AGL15     ---------->DOF2    ---------->DOF2   ---------->DOF2--------->ALFIN1 ---GT1     >>>>>>>>>TBF1 ---------->DOF2    ---------->DOF2           --------->ALFIN1         -----   aaatagtaaaagaagaagaaggaaaagataaagaaaaaaaaaaaagagaaaggagaagacaaagagggaacaagttggggatataataattgagtttcaa  9739600                          ----------->RAV1(2)                         -------->P                         ------>MYB83                 <------------CBF                --------->ATHB51                                      <----------DOF2               <---------YAB1 <<<<<<<GRF7                    <-----------GT1              <---------AHL20(2)           <---------YAB1  <---------AHL20(2)      --------->YAB1     ------>MYB46(1) <---------CCA1(2)--------->YAB1    <----------DOF2 --------->ZAT18--------->ATHB12   <---------ARR11(3)  ------>ZmHOX2a(1)   *TSS             <-------- ----->DOF2  --------->YAB1 ----------->HVH21--------->WOX13(1)   ------>ZmHOX2a(1)       <----------   aagggcattaatagattataattggccaacctgacaacatctcatatcattcacttcctatattaatcctctctttctcttttcatttcccatttcacat  9739700                                                                           ----------->GT1                                                                          <---------TOE1(3)     <----                                         ------>ZmHOX2a(1)                <---------TOE2(3)  <------ZmHOX2a(2)                                      ---------->ID1                 <----------DOF2        --------- ---GT1                    <---------HSFB2a(1)                    <---------ARR11(3)   <----------DOF2 -HVH21    --------->YAB1  --------->HSFB2a(1)   --------->ANAC46 --------->ARR11(3) --------->At4g35610   ctctctctctctataagaaccctagaagaaggtttctcttgtcctccatacacttagcacaactgataaatcttttgaggtaaaatcagctttagatcaa  9739800                                                                                  ---------->DOF2                                                                               ----------->GT1                                                                              <---------MYB46(3)                                                                             <---------ANAC46                                                                           --------->ATHB12                                                                          --------->ICU4                                                                          <---------YAB1                             ---------->DOF2                            --------->YAB1                           <------ZmHOX2a(2)                            <---------ICU4                          --------->ARR11(3)                           --------->ICU4                          <---------ARR11(3)                           <---------YAB1  <-----------GT1     ---------->DOF2                                --------->YAB1      <---------ARR14(2) -----TOE2(3)      --------->YAB1            <---------YAB1        <---------ARR11(3)    --------->ARR14(2) >ARR11(3) --------->At4g35610    <----------DOF2                  --------->ARR11(3)   <------ZmHOX2a(1)   ggtttttctagtcatctctactcataaagatcaaagcttttgctattctcattttctaccaagagacaatatcatgatgatgggtaaagaggatttgggt  9739900                                                                                                  ---                                                                                                <----                                                      ------>MYB83                              -----               --------->GLK1(1)                      ------>MYB46(1)                     --------->AtLEC2              <---------ARR14(2)             --------->TOE2(3)                            --------->ANAC46              --------->ARR14(2)      --------->At4g35610                               <---------AtLEC2        <---------ANAC58        ------>ZmHOX2a(1)    <---------ALFIN1              --------->HSFC1(2)        <---------ANAC58     ------>MYB46(1) --------->TOE1(3)                     <---------HSFC1(2)       <---------ZAT2        ------>MYB83  <---------ARR11(3)                    <---------ARR11(3)       --------->ZAT2--------->ANAC46 <---------At4g35610                     <-----------RAV1(2) ---   ttaagtcttagcttgggatttgcacaaaaccatcctctccagctaaatcttaaacccacttcttcaccaatgtccaatctccagatgtttccatggaacc  9740000                                                                                     <-----------GT1                                                                               ======================                                                                           <---------ARR14(2)                                                                           <---------ARR11(3)                                                                           --------->ARR11(3)                                                                           <---------GLK1(2)                                                                           --------->AGP1                            <<<<<<<<<TBF1                                  --------->ARR14(2)                      <---------HSFC1(2)                     --------->ANAC58  ------>ZmHOX2a(1)                      --------->HSFC1(2)                     --------->ANAC58  --------->LBD16 --->MYB83            <---------At4g35610                --------->HSFB2a(2) ------>ZmHOX2a(2) -----MYB59        <--------P                     <---------DAG2         ----------->ARR10<----------DOF2 ---->AtMYB61  <-----------RAV1(2)                --------->TOE2(3) ----------->RAV1(1)   <---------DAG2 --->MYB46(1) ------>ZmHOX2a(1)     ---------->DOF2      <---------HSFB2a(2)<------ZmHOX2a(2)       <   aaacccttgtttcttcctcaggtaagcttcttcttcaacaaagtcttgataacctttttccacaaggaaacaacacagatcctgaaataaccctttttca  9740100                 ----------->RAV1(1)              --------->ANAC46              --------->ANAC58                  <---------ANAC58                                   --              --------->ANAC58                 --------->ZAT2                            <---------ANAC58            =====================================bZIP_DOF                                <---------ANAC58            ---------->DOF2            =============================MYC_MYB          <---------HSFB2a(1)      ===============================HOX2a_HOX2a<---------ANAC58                     --------->HSFC1(2)      <------ZmHOX2a(2)                <---------ANAC46          --------->ARR14(2)  <---------HSFC1(2)     --------->AGP1   <---------GLK1(2)--------->TGA1a           <---------ARR14(2)<------ZmHOX2a(1)    <---------At4g35610                <---------TGA1a      ------->GAMYB          ==================    --------->At4g35610                <---------O2      --------->MYB52(1)        ================== ============HOX2a_HOX2a      <------ZmHOX2a(1)--------->At4g35610              <-----------RAV1(2)-- -----------GT1  --------->MYB52(1)    --------->O2     --------->MYB46(3)  <------ZmHOX2a(1)      <-   tttttcagatcaacaaaagcaacagtttcttaggaaaatcgacgtgaacagcttgccaacaacggtggatttggaagaggagacaggagtttcgtctcca  9740200  Previous    Next  AGI:  At4g17460.1    Description:  HAT1 (homeobox-leucine zipper protein 1); DNA binding / transcription factor. Identical to Homeobox-leucine zipper protein HAT1 (HAT1) [Arabidopsis Thaliana] (GB:P46600;GB:Q546G7;GB:Q8LBA8); similar to HAT2, transcription factor [Arabidopsis thaliana] (TAIR:AT5G47370.1); similar to homeobox-leucine zipper protein hat1, putative [Brassica oleracea] (GB:ABD65141.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Helix-turn-helix motif, lambda-like repressor; (InterPro:IPR000047); contains InterPro domain Leucine zipper, homeobox-associ Range:  from: 9739675    to: 9741158    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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