Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             --------->ARR14(2)                                                                                           <---------ARR11(1)                                                                                           ------->TEIL                                                                                           <---------ARR14(2)                                                                                           <---------                                                                                          <---------CCA1(2)                                         ------->TEIL                                     <---------ARR14(1)                                     --------------->AtSPL8                             <---------ANAC58                                   --------->GLK1(2)                                    --------->ANAC55(2)                                  --------->ARR11(3)                                    <---------ANAC58                                  <---------GLK1(2)                                   --------->GLK1(2)                   <---------ANAC55(2)  <-----------GT1                --------->ATHB12 <---------ANAC55(2)                   <----------ID1 <---------ARR11(3)                   <---------ICU4<---------GLK1(2)                   <---------YAB1<---------RVE1(1)         --------->At4g35610     ----------->ARR10 >RAV1(1)     <---------ICU4---------->DOF2  <-----------HVH21       <---------WOX13(1)<-------TEIL   atcaaattactaaaactcattacgaaaaaaaaaagagattttgtacctgtcagtcttaagaagctcaattgaatgattccaaactgagattcgtatctcg  9726400                                                                    <---------ICU4                                                                    --------->ATHB12                                                         --------->ARR14(2)                                                         --------->GLK1(2)                                                        <---------GLK1(2)                                           <---------ANAC58         <--------HAHB4                                           <---------ANAC46         --------->YAB1                                      --------->MYB52(1)--------->ARR14(2)                   ------>NtERF2                             --------->MYB52(1)         <---------ARR14(2)                   --------                           <---------MYB111(1)       --------->HSFB2a(2)                    ---------                           <---------MYB111(2)       <---------HSFB2a(2)                    ---------                           <---------MYB55(2)       ------>ZmHOX2a(2)                       ---------                           --------->MYB46(3)       ===================HOX2a_HOX2a         <---------LBD16                           <---------MYB52(2)     --------->ARR11(3)--------->ATHB51   <---------GLK1(1)                      =====================================HOX2a_HOX2a                 --------->GLK1(1)                      <------ZmHOX2a(1)    <---------ANAC58        --------->ICU4     <---------ICU4           --------->TOE2(3)------->GAMYB------->GAMYB--------->LBD16    <---------------AtSPL8 --ARR10   --------->TOE1(3)--------->MYB55(1)  <---------YAB1  <------ZmHOX2a(1)   <---------TOE2(3)   ctgggactcaaaaccctaaatttaggacaactaccgagagcaacggcgtgatgatccagaatcggaggaataattagggtccgattaagaattcccgcca  9726500                                                   <---------ANAC58                                     <<<<<<<<<GATA-2                                                <                                     <<<<<<<<<GATA-3           --------->HSFB2a(1)                  -                                     <<<<<<<<<GATA-4<---------SPL7                                  -                                     <<<<<<<<<GATA-1--------->ZAT18                                <-     <---------ZAT18                 >>>>>>>>>>>>>>>>>LFY      <---------HSFC1(2)                  --     --------->ZAT18    --------->At4g35610        <---------ANAC58      --------->HSFB2a(2)       <- ->LBD16                <---------At4g35610     <------ZmHOX2a(1)        <---------HSFB2a(2)       <- >ANAC58             <---------MYB52(1)    <-----------HVH21   <---------HSFB2a(1)             <----- >ANAC46           <---------YAB1   <---------ARR14(2)         --------->HSFC1(2)           --------- >ANAC58  --------->TOE2(3)         --------->ARR14(2)--------->SPL7----------->HVH21  <--------P <--   taagaagcgcattcttaaattccgatagctgattactgaatccactgtgaggagcgtaccagagaaacttctgacctagaagagttcgggttagtatctc  9726600   --------->ZAT18   <---------ZAT14   --------->ZAT14 ------>ZmHOX2a(2) ------ZmHOX2a(2)          --------->LBD16 -------->GLK1(1)         <---------HSFB2a(2) -------->At4g35610       --------->HSFB2a(2) ----------ARR10         ==================================HOX2a_HOX2a ------->ARR14(2)        ------>ZmHOX2a(2) --------ARR14(2)       ===================================HOX2a_HOX2a --------AGP1           <------ZmHOX2a(2)                       --------->HSFB2a(2) ----LBD16             --------->ARR14(2)                       <---------HSFB2a(2) >ARR11(3)             <---------ARR14(2)                       <---------LBD16 -------CCA1(2)<---------------AtSPL3               <------ZmHOX2a(1)   ggatctgcactgagggaattgaacggatccagaaaatgcagagattgagaacaaggacttgggcatctcggagtaagtgatgaagaagacgacgatgaag  9726700                                                                                 <------MYB83                                                                                 <------MYB46(1)                                                  <---------ANAC58            <---------ANAC58                                                  <---------ANAC58        --------->ALFIN1                                              <---------MYB52(1)         ------->PIF5                                            <---------DEAR3(2)           <-------PIF5                                            <---------MYB46(3)          <---------O2                                          ---------->ID1                <---------ANAC58                                      <XXXXXXXXXXXXXXXXXXXXMIR3933      <---------ANAC58                                     --------->ARR14(2)                 <---------ANAC46                                     <---------ARR14(2)                 --------->TGA1a                                   <---------TOE1(2)                    <---------TGA1a                      ---------->DOF2<---------GLK1(2)                 ------->TEIL              --------->MYB52(1)   <---------TOE2(2)      ------>ZmHOX2a(1)   <---------ANAC58   aacacaacaagtatagaaacggagcaaagaaatatcgcagatttgtcggtttgcttcttcctgtttggccatggacgtgggcttggtctactgggattga  9726800                                                 <---------ANAC46                                             <-------GAMYB                                            <---------ANAC58                                            <---------ANAC46                                       <---------ICU4                                       -------->ATHB1                                       --------->ATHB51                                       --------->ATHB12                                      <---------ATHB12                                      <---------YAB1                                      --------->ICU4                                        <--------                                   <------NtERF2 <---------ANAC58                        <---------ANAC58                                   ------------>ATHB5                                    <---------ANAC58                                 --------->ANAC46<---------ANAC55(1)              --------->MYB52(1)                                ---------->ID1   <---------ANAC58             ----------------->AGL1                       <---------TOE1(3)*TSS<---------ANAC58              --------->At4g35610                       <---------TOE2(3)<------------CBF            --------->REM1(2) --------->At5g28300   agaagttgttcatgttttttgctctgaggttttagtcgccatcattgcgttgcgtctagttttgctcatgtgtagaagatgccaaaacggtgagtgtcac  9726900                                                                         <---------ARR11(3)                                                                         --------->ARR11(3)                                        --------->AHL20(2) ----------->GT1  <----------DOF2     -----       <---------MYB59----------->HVH21--------->YAB1   --------->YAB1  <---------GLK1(1)--------->GLK1(2) ---HVH21--------->MYB52(1)   <----------DOF2    ------->TEIL <---------AHL20(2)     --------->YAB1--   tgttttgggcctaactaatattctctgatgggccttaactaaaataatacgaacttaaacatagttaattttagaaatctttttgtaacataatctatac  9727000                                                                <---------ICU4                                                              <---------TOE2(3)                                                            --------->AHL20(2)                                                            <---------AHL20(2)                                                           --------->AHL20(2)                                                   <---------ANAC58                                                   <---------ANAC58                                                 <---------ARR11(3)                                                 --------->ARR11(3)                                                <---------CCA1(1)                               -----                                                --------->CCA1(1)                     <---------YAB1        <---------ANAC58                        --------->RVE1(1)                  <---------YAB1        <---------ANAC58                       --------->ARR11(3)                <---------AHL20(2)        <---------ANAC46                       <---------ARR11(3)               <---------YAB1  <----       <---------LBD16          --------->ANAC58--------->GLK1(1)              <---------AHL20(2)<--- ---->ANAC46                    --------->ANAC58<---------GLK1(1)            <---------YAB1 <-------- ----->TEIL     --------->ANAC46--------->ANAC46<---------RVE1(1)       ------->TEIL <---------AHL20(2)   gaagctatttgcgcgtccacataacattttaaacaagcaatggagattagatatcttgctaattaatatttatgaacttatttttatttttattcttttt  9727100                         --------->CCA1(2)                        --------->AHL20(1)                                           --------->YAB1            --------->AHL20(1)                                       <---------AHL20(1)            <---------AHL20(2)                           <---------AHL20(2)          --------->AHL20(2)    ----------->GT1    --------->AHL20(2)        --------->AHL20(2)  --------->ARR11(3) ---->AHL20(2)       --------->AHL20(2)      --------->AHL20(2)      --------->AHL20(1)    <---------AHL20(2) -----AHL20(2)   --------->AHL20(2)          <---------AHL20(2)     <---------AHL20(2)--------->AHL20(1) ------AHL20(2) --------->AHL20(2) ---------->DOF2       --------->AHL20(2)        --------->AHL20(2) --DOF2     --------->AHL20(2)    --------->AHL20(2)     <---------AHL20(1)       --------->YAB1   --   aaatttttgtaaaataaaataaaaaatatatgaaaataaaagaatatttaaaaatataaaaaatttctaaatattttgtcaccaaaataatattaaaaat  9727200                                  --------->ANAC46                                --------->ANAC46                          --------->AHL20(2)     <---------ARR11(3)                       <---------AHL20(1)        --------->ARR11(3) --------->AHL20(2)                       <---------AHL20(2)      --------->MYB59   --------->YAB1                       --------->AHL20(2)<---------AHL20(2)  ------>MYB46(1)                      <---------AHL20(2) --------->AHL20(2)  ------>MYB83                  <---------AHL20(2)     <---------AHL20(1)  --------->MYB52(1)                  --------->AHL20(2)     --------->AHL20(1)<---------MYB46(2)                  --------->AHL20(1)    --------->AHL20(2) <---------MYB59 <----------DOF2       ----    ----------->GT1   --------->AHL20(2)<---------AHL20(2) <---------MYB111(1)             --------->GLK1(1) ------->YAB1     <---------AHL20(1)  --------->YAB1<----------DOF2 --------->YAB1 <---------ANAC46 <   atcaaaatgtaaatttctattttattaaatttatacacaaaaataaatttaggtctttggacctaactaataatattctttgatggcctagagaaatcga  9727300  Previous    Next  AGI:  At4g17430.1    Description:  similar to hypothetical protein 31.t00055 [Brassica oleracea] (GB:ABD65093.1) Range:  from: 9724852    to: 9726840    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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