Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               --------->ZAT2                                                        --                             <---------ZAT2                   --------->RAP2.3(3)                  --                             <---------At4g35610            --------->ZAT18         --------->ANAC46                             --------->At4g35610       ---------->DOF2              --------->ANAC58    <---------ZAT14         ------->TEIL            --------->YAB1                  --------->ANAC58    --------->ZAT14 ------->TEIL        <------ZmHOX2a(1)   <---------ZAT18  --------->ANAC58      -- --->DOF2  --------->At4g35610       <-----------RAV1(2)--------->DAG2       --------->ANAC58    ---- >ARR11(3) <---------At4g35610      <-------TEIL   <---------YAB1            --------->ANAC46<-------   gagctgttcagtcagaagaatgaatctatgtagctgggttcaggaagtattctatcataaagcgcagacataaatgactacgcatcaagacaccgcttaa  9715200      --------->WOX13(1)    <---------ATHB12                           <---------AHL20(1)   --------->ANAC58                            --------->AHL20(1)                      <---------ANAC58   --------->ANAC58                            <---------AHL20(2)                      <---------AtLEC2  --------->WOX13(1)                --------->TOE2(3)                                  <---------ANAC58 ------->ANAC46                     <---------MYB59 --------->YAB1                <---------ARR11(3) ------->ANAC58               <---------ICU4  --------->AHL20(2)                  --------->ARR11(3) ------->ANAC58  <---------ANAC58   --------->TOE1(3)                    >>>>>>>>>TBF1--------->ZAT2 ----->MYB46(3)  <---------ANAC58  <---------ANAC55(2)    --------->TOE2(3)   ---------->DOF2   ----- ---DOF2<---------ATHB12    ----------->RAV1(1)--------->AHL20(2)<-----------------------TaNAC69(2)   ccagcaatcaatcgataaggcttgattcaacaacattacctaaacctattaaattgataaccaaaatgaagagaagaagaaaaagacctgcttggccttg  9715300                                                                                ------>MYB83                                                                              <---------MYB52(2)                                                                              <---------MYB59                                                                              <---------MYB111(2)                                                                              <---------MYB111(1)                                                                              <---------MYB46(2)                                                                              --------->AtMYB61                                                                             --------->ANAC58                                                                      --------->ANAC46                                                                 --------->ARR14(2)                                                                 <---------ARR14(2)------->GAMYB                                                              <------NtERF2  --------->ANAC55(1)                            --------->ALFIN1                 ------>NtERF2   --------->ANAC55(2)                     <------NtERF2                          <---------ATERF1(2) ------>MYB46(1)                   --------->ETT(1)                         --------->ATERF1(2)--------->MYB55(1)                 <-----------HVH21                        <---------ZAT2     <---------ANAC55(2)              <---------ANAC58                            --------->At4g35610--------->ANAC58            ------->TEIL  --------->ALFIN1                --------->ZAT2   <---------ALFIN1        <- ---->REM1(2) <---------ANAC58<----------ID1              <---------At4g35610--------->ANAC46   -----   tagccgagacgacgagccttgtcgggacgagtgggacgaacaagacgaacaatggaaggctgctggcgatactcccaacacctaaccctctgaagaaacc  9715400                                              --------->ANAC46                                              --------->ANAC58                                              --------->ANAC58                                         <---------------AtSPL3                                         <---------------AtSPL8                                       --------->ARR14(2)                                       ------->TEIL                                    --------->ANAC58                                    --------->ANAC58                                    <---------ANAC55(2)                                     <--------                                    --------->ANAC55(2)                                  --------->HSFC1(1)                                    --------->ANAC55(1)                                  <---------HSFC1(1)                                  <---------ALFIN1                                       --------->HSFB2a(2)                                ------>NtERF2<---------ZAT18                             <---------HSFB2a(2)                                <-----------HVH21                <-----------GT1   <-----------GT1       ----------->HVH21       <---------ETT(1)   ----------->RAV1(2)             --------->AHL20(2)       ------->GAMYB           --------->ANAC46   --------->At4g35610        ------>ZmHOX2a(1) ----------HVH21               ----------->HVH21 ------->TEIL --------->YAB1--------->TOE1(3)      <- ---->TOE2(3)        ------>ZmHOX2a(1) <---------ARR14(2) --------->YAB1    --------->TOE2(3)--------   tcatcacatccgactgcttcttcctccatagctccgacacgtatttgtacgcacctgtaatcaaaaatcacatttcatccttaattaacttctagaatct  9715500                                                                     <------NtERF2                                                                     --------->ATERF1(1)                                                                    ------>NtERF2                                                                    <-----------HVH21                                                                    <---------ATERF1(1)                                                                   <---------DEAR3(1)                                                                   <---------O2                                                                   --------->O2                                                                   --------->DEAR3(1)                                                                 ------>NtERF2                             ----------->GT1                     --------->LBD16               <-----                   <---------At4g35610                          <---------LBD16                <----- -GLK1(2)     --------->ANAC58                                  <---------RAP2.6(2)           <------ --------ATHB12    --------->At4g35610                         <---------LBD16    <----------DOF2 ->GLK1(2)    --------->ANAC58                             <----------DOF2<-----------HVH21   -------   aatgaacaatacagaaacgacatctgagagagagataatagtgagaaacatacccattgcgattttccggcgtcgcagtcacttctttcttcgaattagg  9715600      --------->AHL20(2)    --------------->AGL15    <----------DOF2    <---------------AGL15                                                       <----------DOF2   <-----------------AGL3                     ---------->DOF2                   <---------DAG2 -MYB46(1)                        --------->GLK1(1)        <------------CBF<---------MYB52(1) -MYB83                           <---------GLK1(1)       --------->ATHB12 --------->DOF5.7(2) ---TOE2(3)                    <---------TOE2(3)         --------->ICU4   <-------GAMYB<------------CBF -->MYB59               *TSS   <---------TOE1(3)  ---------->DOF2  <----------DOF2  --------->ANAC55(2)   tttgtgctttaaatagatggctccatgggaattagggtttccatcagacaaagaaagcccttattgggcctttttccgttagctttatgtattgggcctt  9715700                                                                               <------MYB83                                                <---------TOE2(3)              <---------ANAC55(2)                                              <---------AHL20(2)               <------MYB46(1)                                           <---------AHL20(2)     --------->ANAC46             <---------ARR11(3)           --------->AHL20(2)      --------->ANAC58               ----             --------->ARR11(3)           <---------AHL20(2)      --------->ANAC58    *TSS<----------DOF2      --------->TOE2(3)                  <---------YAB1   <----------ID1      --------->MYB59   <----   ----------->RAV1(1)          <XXXXXXXXXXXXXXXXXXXXMIR841B*   ---------->DOF2<---------ANAC46 -----  --------->REM1(1) <------------CBF   --------->YAB1---------->DOF2          --------->MYB46(2)<----   cgctacaacataaaacatctctaattgaactgtatggcccattataaatttatgtaaaaggagccaaaacgcaagagaattaggtgaagagtcttttgga  9715800                                                                                                -----                                                                                                -----                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                               <-----     <---------YAB1                                                                          --------  --------->ARR14(2)                                                                       ----------  <---------MYB52(1)                                 <---------GLK1(1)                 --------->ANAC46  <---------ARR14(2)                         <---------ARR14(2)                        ------->GAMYB <-------GAMYB                               --------->ARR14(2)                        --------->ANAC58 ----->ARR14(1)                         <---------ANAC58                        --------->WOX13(1) -----ARR14(2)                          <---------ANAC58                    --------->GLK1(1)<------- ---->ARR14(2)                      <---------ZAT6   --------->GLK1(1)------>ZmHOX2a(1)--------->ANAC58 -----GLK1(2)         ------>ZmHOX2a(1) <---------ANAC46       --------->ARR14(2)  --------->MYB46(3)   ttcggttacgatagttctctattcctcttcaaaccctagagttcgtgtttctgcgatatccatcggtttctccttcatatatccatcaaacgccaaagat  9715900                                                          --------->MYB55(2) ---->GLK1(2)                                             <---------MYB46(3) ---->ARR14(1)                                            --------->ABI4(2) ----ARR11(3)                  <---------At5g28300       --------->ALFIN1 --->ARR11(3)                 <-----------GT1            <---------AtMYB61 --->ARR14(2)     ------>ZmHOX2a(2)                   -------------->OsCBT ----GLK1(2)     <------ZmHOX2a(2)              --------->ARR14(2)                    <---------HSFC1(2) ----ARR14(2)   <---------ARR11(3)              <---------ARR14(2)                    --------->HSFC1(2) --->ARR10      --------->ARR14(2)      --------->YAB1<---------DEAR3(1)              <---------ZAT2 >DOF2          --------->ARR11(3)--------->At5g28300<---------LBD16                  --------->ZAT2 --ATHB12       <---------ARR14(2)--------->LBD16    --------->LBD16        ------>ZmHOX2a(1)   tctctaattctctctcgagatcgtctgcaatttcaccgtgaatcatcagggataccgcggtggtttcgattctatttcctcgattcgaagcttggagagt  9716000                                        <---------ARR11(3)                                        --------->ARR11(3)                                       --------->GLK1(1)                                       <---------GLK1(1)                                            <    --------->At4g35610                --------->RVE1(1)                              <---------ANAC58  <---------GLK1(2)                   <---------ARR11(3)                              <---------ANAC58 --------->At4g35610           <---------ANAC46        --------->TOE1(2)        <---------ALFIN1 <--- <---------At4g35610<---------ATHB12  --------->ARR11(3)                       <---------REM1(2) <---   ttcagcttctgaattgaagccagtgattcaattgtttggagatatctgagcattgtccctgcgatgtattcgattcaatccaacacgggcgttctcgttt  9716100  Previous    Next  AGI:  At4g17390.1    Description:  60S ribosomal protein L15 (RPL15B). Identical to 60S ribosomal protein L15-2 (RPL15B) [Arabidopsis Thaliana] (GB:Q8VYF1;GB:O23582); similar to 60S ribosomal protein L15 (RPL15A) [Arabidopsis thaliana] (TAIR:AT4G16720.1); similar to 60S ribosomal protein L15 [Brassica oleracea] (GB:ABD65137.1); contains InterPro domain Ribosomal protein L15e; (InterPro:IPR000439); contains InterPro domain Ribosomal protein L23/L15e, core (InterPro:IPR012678) Range:  from: 9714104    to: 9715624    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g17410.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G47430.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G47430.1); similar to hypothetical protein 31.t00039 [Brassica oleracea] (GB:ABD65123.1); similar to hypothetical protein 24.t00020 [Brassica oleracea] (GB:ABD64942.1); contains InterPro domain DWNN domain (InterPro:IPR014891); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083) Range:  from: 9715786    to: 9721943    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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